Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 1.9e-184 649.0 337 100.0
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 4.6e-170 601.3 341 93.5
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.3e-168 595.1 341 93.0
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 7.8e-109 397.9 355 62.5
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 2.5e-107 392.9 336 65.2
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 2.4e-102 376.3 343 61.5
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 2.3e-100 369.8 322 60.2
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 6.6e-100 368.2 338 57.7
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 4.3e-99 365.5 343 60.1
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 2.8e-98 362.8 326 58.3
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 8.1e-98 361.3 326 58.3
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.2e-96 357.5 320 58.4
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 1.5e-96 357.1 300 61.3
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 1.7e-95 353.6 331 59.5
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 1.0e-92 344.4 345 57.4
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 3.0e-92 342.8 346 54.6
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 3.3e-91 339.3 331 55.6
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 2.1e-90 336.7 331 55.9
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 3.6e-90 335.9 331 56.2
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 2.3e-89 333.2 341 53.1
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 6.8e-89 331.6 332 56.3
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 2.9e-87 326.2 331 57.1
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 1.1e-86 324.3 332 55.7
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 1.9e-86 323.6 345 55.1
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 3.2e-86 322.8 311 53.4
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 3.2e-86 322.8 346 50.3
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 1.6e-85 320.5 317 55.5
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 4.6e-85 318.9 330 52.4
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 6.0e-85 318.5 322 55.0
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 7.8e-85 318.2 330 52.4
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 3.0e-84 316.2 331 52.3
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 3.0e-84 316.2 316 56.0
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 5.1e-84 315.5 336 54.2
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 8.6e-84 314.7 330 53.3
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 8.6e-84 314.7 345 51.6
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 1.1e-83 314.3 332 54.2
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.5e-83 313.9 332 53.9
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 2.5e-83 313.2 333 52.9
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 2.5e-83 313.2 322 54.0
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 1.2e-82 310.8 336 51.8
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 2.4e-81 306.6 340 52.1
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 3.1e-81 306.2 316 52.5
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 3.1e-81 306.2 332 51.5
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 6.8e-81 305.1 331 50.5
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 8.9e-81 304.7 315 52.4
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 1.2e-80 304.3 326 52.8
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 2.0e-80 303.5 345 49.9
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 3.4e-80 302.8 345 49.3
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 7.6e-80 301.6 345 49.6
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.7e-79 300.4 343 49.0
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 2.2e-79 300.1 335 49.3
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 2.9e-79 299.7 350 51.4
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 8.4e-79 298.1 337 49.0
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 1.1e-78 297.7 345 50.7
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 2.4e-78 296.6 297 56.6
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 3.2e-78 296.2 284 53.5
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 3.2e-78 296.2 315 52.1
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 1.6e-77 293.9 311 53.7
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 2.7e-77 293.1 345 49.6
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 6.0e-77 292.0 321 51.7
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 1.7e-76 290.4 323 51.4
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 6.6e-76 288.5 316 50.0
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 1.1e-75 287.7 335 51.6
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 4.8e-74 282.3 342 48.0
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 8.1e-74 281.6 337 49.0
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 8.1e-74 281.6 316 50.3
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 1.1e-73 281.2 319 51.4
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 7.6e-72 275.0 322 51.6
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 2.2e-71 273.5 345 48.1
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 4.9e-71 272.3 322 48.1
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 1.1e-70 271.2 337 46.9
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 1.4e-70 270.8 319 50.2
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 2.4e-70 270.0 311 49.5
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 3.2e-70 269.6 324 48.1
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 5.4e-70 268.9 327 45.6
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 7.9e-69 265.0 316 47.2
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 2.3e-68 263.5 335 45.7
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 3.0e-68 263.1 327 45.9
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 5.1e-68 262.3 316 45.9
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 5.1e-68 262.3 316 46.5
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 5.1e-68 262.3 316 45.9
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 5.1e-68 262.3 316 46.2
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 6.6e-68 261.9 316 45.9
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 1.1e-67 261.2 316 46.2
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 1.1e-67 261.2 332 45.2
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 7.4e-67 258.5 336 44.3
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 1.6e-61 240.7 315 45.1
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 1.6e-61 240.7 312 46.5
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 4.6e-61 239.2 324 44.4
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 4.9e-55 219.2 311 41.5
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 2.3e-52 210.3 232 50.4
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 2.8e-50 203.4 217 51.2
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.5e-43 180.3 214 47.2
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 7.7e-40 168.7 163 52.8
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 3.6e-37 159.8 133 62.4
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 3.0e-36 156.8 171 52.0
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 4.8e-34 149.4 151 50.3
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.2e-32 144.8 113 63.7
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 3.3e-27 126.7 195 42.6
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.8e-25 120.9 99 62.6
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 1.0e-20 105.1 177 43.5
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 3.3e-19 100.1 183 39.3
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.0e-16 90.9 145 38.6
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 5.5e-14 82.8 115 46.1
Cpa.g.sc8.109 Carica papaya HOM05D007486 ORTHO05D003673 2.7e-08 63.9 193 25.4
PSO541G2034 Papaver somniferum HOM05D000424 ORTHO05D000355 1.5e-06 58.2 201 23.4
TWI18G0642 Tripterygium wilfordii HOM05D007486 ORTHO05D003673 7.2e-06 55.8 209 24.9


User provided reference genes

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