Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00263 Erythranthe guttata HOM05D007400 ORTHO05D009351 1.5e-59 232.6 117 100.0
Migut.L00012 Erythranthe guttata HOM05D007400 ORTHO05D009351 2.6e-43 178.7 91 98.9
Actinidia11209 Actinidia chinensis HOM05D007400 ORTHO05D009351 2.9e-39 165.2 91 86.8
Cc09_g06320 Coffea canephora HOM05D007400 ORTHO05D009351 5.0e-39 164.5 88 88.6
CSS0009058 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 1.1e-38 163.3 91 85.7
CDE05G1756 Ceratophyllum demersum HOM05D007400 ORTHO05D009351 1.5e-38 162.9 90 85.6
Oeu050064.1 Olea europaea HOM05D007400 ORTHO05D009351 1.5e-38 162.9 91 85.7
Ciclev10016614m.g Citrus clementina HOM05D007400 ORTHO05D009351 5.5e-38 161.0 88 88.6
CAN.G1222.5 Capsicum annuum HOM05D007400 ORTHO05D009351 7.2e-38 160.6 88 85.2
Peaxi162Scf00149g01015 Petunia axillaris HOM05D007400 ORTHO05D009351 7.2e-38 160.6 91 82.4
Hma1.2p1_0040F.1_g025040 Hydrangea macrophylla HOM05D007400 ORTHO05D009351 9.5e-38 160.2 88 88.6
CSS0000937 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 1.2e-37 159.8 91 84.6
CiPaw.10G065400 Carya illinoinensis HOM05D007400 ORTHO05D009351 1.6e-37 159.5 91 85.7
Potri.012G119800 Populus trichocarpa HOM05D007400 ORTHO05D009351 1.6e-37 159.5 91 83.5
Solyc02g069130.3 Solanum lycopersicum HOM05D007400 ORTHO05D009351 1.6e-37 159.5 88 84.1
AT4G19830 Arabidopsis thaliana HOM05D007400 ORTHO05D009351 2.1e-37 159.1 89 86.5
QL11p018093 Quercus lobata HOM05D007400 ORTHO05D009351 2.1e-37 159.1 88 87.5
ATR0763G247 Amborella trichopoda HOM05D007400 ORTHO05D009351 2.8e-37 158.7 88 85.2
Carub.0007s2138 Capsella rubella HOM05D007400 ORTHO05D009351 2.8e-37 158.7 89 85.4
Duzib192G0901 Durio zibethinus HOM05D007400 ORTHO05D009351 2.8e-37 158.7 88 86.4
Sopen02g018260 Solanum pennellii HOM05D007400 ORTHO05D009351 2.8e-37 158.7 88 83.0
Thecc.06G140800 Theobroma cacao HOM05D007400 ORTHO05D009351 2.8e-37 158.7 88 86.4
Thhalv10026156m.g Eutrema salsugineum HOM05D007400 ORTHO05D009351 3.6e-37 158.3 89 84.3
Sed0027636 Sechium edule HOM05D007400 ORTHO05D009351 3.6e-37 158.3 88 85.2
GSVIVG01012101001 Vitis vinifera HOM05D007400 ORTHO05D009351 3.6e-37 158.3 88 86.4
Nn7g38084 Nelumbo nucifera HOM05D007400 ORTHO05D009351 4.7e-37 157.9 84 91.7
unitig_61.g26077 Utricularia gibba HOM05D007400 ORTHO05D009351 4.7e-37 157.9 88 84.1
Gorai.009G151100 Gossypium raimondii HOM05D007400 ORTHO05D009351 6.1e-37 157.5 88 85.2
MD00G1111500 Malus domestica HOM05D007400 ORTHO05D009351 6.1e-37 157.5 91 82.4
arahy.Tifrunner.gnm1.ann1.L1RKW0 Arachis hypogaea HOM05D007400 ORTHO05D009351 8.0e-37 157.1 90 86.7
CARHR226600 Cardamine hirsuta HOM05D007400 ORTHO05D009351 8.0e-37 157.1 89 84.3
Cfa000725 Carpinus fangiana HOM05D007400 ORTHO05D009351 8.0e-37 157.1 91 81.3
CANSAT11G1633 Cannabis sativa HOM05D007400 ORTHO05D009351 1.0e-36 156.8 90 81.1
FvH4_4g09390 Fragaria vesca HOM05D007400 ORTHO05D009351 1.0e-36 156.8 87 85.1
Gohir.A05G144700 Gossypium hirsutum HOM05D007400 ORTHO05D009351 1.0e-36 156.8 87 86.2
Lj5g0000759 Lotus japonicus HOM05D007400 ORTHO05D009351 1.0e-36 156.8 90 85.6
Medtr1g061080 Medicago truncatula HOM05D007400 ORTHO05D009351 1.0e-36 156.8 90 86.7
arahy.Tifrunner.gnm1.ann1.ARB9WH Arachis hypogaea HOM05D007400 ORTHO05D009351 1.4e-36 156.4 90 85.6
Gohir.D05G147100 Gossypium hirsutum HOM05D007400 ORTHO05D009351 1.4e-36 156.4 88 84.1
BcaB03g11643 Brassica carinata HOM05D007400 ORTHO05D009351 1.8e-36 156.0 89 84.3
BcaC01g00636 Brassica carinata HOM05D007400 ORTHO05D009351 1.8e-36 156.0 89 84.3
A08p14510 Brassica napus HOM05D007400 ORTHO05D009351 1.8e-36 156.0 89 84.3
C03p82350 Brassica napus HOM05D007400 ORTHO05D009351 1.8e-36 156.0 89 84.3
BolC3t20518H Brassica oleracea HOM05D007400 ORTHO05D009351 1.8e-36 156.0 89 84.3
BraA08t33439Z Brassica rapa HOM05D007400 ORTHO05D009351 1.8e-36 156.0 89 84.3
TAR626G1335 Trochodendron aralioides HOM05D007400 ORTHO05D009351 1.8e-36 156.0 90 83.3
Cc11_g00930 Coffea canephora HOM05D007400 ORTHO05D009351 2.3e-36 155.6 88 85.2
Haze_06019 Corylus avellana HOM05D007400 ORTHO05D009351 2.3e-36 155.6 91 81.3
MELO3C021776.2 Cucumis melo HOM05D007400 ORTHO05D009351 2.3e-36 155.6 88 83.0
CsaV3_1G046550 Cucumis sativus L. HOM05D007400 ORTHO05D009351 2.3e-36 155.6 88 83.0
Glyma.10G066600 Glycine max HOM05D007400 ORTHO05D009351 2.3e-36 155.6 87 87.4
Nitab4.5_0017218g0010 Nicotiana tabacum HOM05D007400 ORTHO05D009351 2.3e-36 155.6 84 85.7
Os02g0168700 Oryza sativa ssp. japonica HOM05D007400 ORTHO05D009351 3.0e-36 155.2 90 78.9
RcHm_v2.0_Chr4g0402661 Rosa chinensis HOM05D007400 ORTHO05D009351 3.0e-36 155.2 87 83.9
HanXRQChr15g0487331 Helianthus annuus HOM05D007400 ORTHO05D009351 4.0e-36 154.8 88 83.0
THA.LOC104811504 Tarenaya hassleriana HOM05D007400 ORTHO05D009351 4.0e-36 154.8 88 83.0
ClCG01G009370 Citrullus lanatus HOM05D007400 ORTHO05D009351 5.2e-36 154.5 88 81.8
PGR042G1002 Punica granatum HOM05D007400 ORTHO05D009351 6.8e-36 154.1 93 81.7
TWI63G0941 Tripterygium wilfordii HOM05D007400 ORTHO05D009351 6.8e-36 154.1 88 81.8
Cpa.g.sc135.34 Carica papaya HOM05D007400 ORTHO05D009351 8.9e-36 153.7 91 81.3
FAN22G1838 Fragaria x ananassa HOM05D007400 ORTHO05D009351 8.9e-36 153.7 87 83.9
Phvul.007G223000 Phaseolus vulgaris HOM05D007400 ORTHO05D009351 8.9e-36 153.7 87 86.2
Eucgr.E01894 Eucalyptus grandis HOM05D007400 ORTHO05D009351 1.2e-35 153.3 91 83.5
Zm00001eb207360 Zea mays HOM05D007400 ORTHO05D009351 1.2e-35 153.3 89 78.7
ECA232G4176 Erigeron canadensis HOM05D007400 ORTHO05D009351 1.5e-35 152.9 91 81.3
Sp7g18330 Schrenkiella parvula HOM05D007400 ORTHO05D009351 2.0e-35 152.5 88 81.8
Lalb_Chr09g0328751 Lupinus albus HOM05D007400 ORTHO05D009351 2.6e-35 152.1 87 85.1
TPR.G5680 Trifolium pratense HOM05D007400 ORTHO05D009351 2.6e-35 152.1 84 88.1
Aa31LG6G2310 Aethionema arabicum HOM05D007400 ORTHO05D009351 3.4e-35 151.8 89 79.8
Lsat_1_v5_gn_8_117760 Lactuca sativa HOM05D007400 ORTHO05D009351 3.4e-35 151.8 88 80.7
vmacro11006 Vaccinium macrocarpon HOM05D007400 ORTHO05D009351 4.4e-35 151.4 94 80.9
PSO675G6700 Papaver somniferum HOM05D007400 ORTHO05D009351 5.7e-35 151.0 92 80.4
Lj2A352T41 Lonicera japonica HOM05D007400 ORTHO05D009351 7.5e-35 150.6 91 76.9
DCAR_003791 Daucus carota HOM05D007400 ORTHO05D009351 9.8e-35 150.2 91 80.2
Atru.chr10.612 Acer truncatum HOM05D007400 ORTHO05D009351 1.7e-34 149.4 92 81.5
AUR62011827 Chenopodium quinoa HOM05D007400 ORTHO05D009351 1.7e-34 149.4 87 79.3
Manes.16G059200 Manihot esculenta HOM05D007400 ORTHO05D009351 4.9e-34 147.9 93 81.7
VMungo0720G1846 Vigna mungo HOM05D007400 ORTHO05D009351 3.1e-33 145.2 98 76.5
Sc05g0000500 Simmondsia chinensis HOM05D007400 ORTHO05D009351 9.2e-33 143.7 87 77.0
Mapoly0025s0105 Marchantia polymorpha HOM05D007400 ORTHO05D009351 2.7e-32 142.1 87 73.6
SGA_v2.0_scaffold341G49377 Striga asiatica HOM05D007400 ORTHO05D009351 1.3e-31 139.8 79 86.1
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 2.3e-31 139.0 90 68.9
Pp3c2_2300 Physcomitrium patens HOM05D007400 ORTHO05D009351 5.0e-31 137.9 88 73.9
Ah.02g112190 Amaranthus hybridus HOM05D007400 ORTHO05D009351 8.6e-31 137.1 77 81.8
EL10As5g23512 Beta vulgaris HOM05D007400 ORTHO05D009351 8.6e-31 137.1 78 82.1
MBI09_g37060_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 8.6e-31 137.1 133 57.9
Ca_11627_v3 Cicer arietinum L. HOM05D007400 ORTHO05D009351 1.1e-30 136.7 87 79.3
AUR62024671 Chenopodium quinoa HOM05D007400 ORTHO05D009351 5.6e-30 134.4 78 79.5
SMO270G0023 Selaginella moellendorffii HOM05D007400 ORTHO05D009351 2.1e-29 132.5 84 69.0
MBI09_g28984_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 4.4e-27 124.8 153 49.0
CSS0044125 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 7.8e-24 114.0 61 88.5
PSO675G3258 Papaver somniferum HOM05D007400 ORTHO05D009351 5.0e-23 111.3 68 77.9
Rhsim02G0169200 Rhododendron simsii HOM05D007400 ORTHO05D009351 6.4e-18 94.4 206 34.5
CSS0019726 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 3.2e-17 92.0 50 86.0
MBI08_g39084_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 9.2e-17 90.5 50 86.0
Prupe.1G087100 Prunus persica HOM05D007400 ORTHO05D009351 1.2e-16 90.1 50 82.0
COL.COLO4_30978 Corchorus olitorius HOM05D000065 ORTHO05D001606 2.1e-16 89.4 50 84.0
Dinv04112 Davidia involucrata HOM05D007400 ORTHO05D009351 2.7e-16 89.0 50 80.0
AL7G34250 Arabidopsis lyrata HOM05D007400 ORTHO05D009351 4.6e-16 88.2 50 82.0
FAN12G2033 Fragaria x ananassa HOM05D007400 ORTHO05D009351 1.3e-15 86.7 49 81.6
Psat6g078400 Pisum sativum HOM05D007400 ORTHO05D009351 2.3e-15 85.9 49 85.7
AL7G34270 Arabidopsis lyrata HOM05D000741 ORTHO05D000506 8.6e-15 84.0 102 48.0
Sabra12G0089100 Salix brachista HOM05D007400 ORTHO05D009351 4.7e-13 78.2 60 65.0
MBI03_g31611_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 8.3e-10 67.4 38 81.6
Pp3c5_13790 Physcomitrium patens HOM05D002468 ORTHO05D009172 1.1e-06 57.0 87 37.9
SMO356G0109 Selaginella moellendorffii HOM05D007127 ORTHO05D008803 1.5e-06 56.6 63 46.0
AagrBONN_evm.TU.Sc2ySwM_368.1220 Anthoceros agrestis HOM05D007127 ORTHO05D008803 2.5e-06 55.8 87 33.3
FAN25G0358 Fragaria x ananassa HOM05D007127 ORTHO05D008803 5.6e-06 54.7 86 34.9


User provided reference genes

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