Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 3.5e-149 531.6 260 100.0
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 3.5e-149 531.6 260 100.0
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 9.8e-136 486.9 256 90.6
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 1.6e-133 479.6 256 91.0
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 2.0e-133 479.2 257 88.7
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 3.6e-130 468.4 256 87.1
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 6.2e-130 467.6 256 85.9
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 6.2e-130 467.6 256 86.7
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 8.0e-130 467.2 256 85.9
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 2.3e-129 465.7 262 87.8
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 5.2e-129 464.5 256 87.1
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 5.2e-129 464.5 256 85.9
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 5.2e-129 464.5 256 85.9
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 1.5e-128 463.0 256 85.9
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 2.0e-128 462.6 256 85.9
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 3.4e-128 461.8 256 85.5
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 5.8e-128 461.1 256 85.9
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 7.5e-128 460.7 256 85.2
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 1.3e-127 459.9 256 85.5
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 2.9e-127 458.8 249 88.4
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 2.9e-127 458.8 256 87.1
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 3.7e-127 458.4 256 85.2
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 4.9e-127 458.0 256 85.2
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 6.4e-127 457.6 256 85.2
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 6.4e-127 457.6 256 86.7
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 1.1e-126 456.8 256 84.4
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 1.4e-126 456.4 255 86.3
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 1.9e-126 456.1 256 84.8
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 5.4e-126 454.5 256 84.0
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 7.0e-126 454.1 256 84.4
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 9.2e-126 453.8 256 84.0
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 1.2e-125 453.4 257 82.5
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 1.6e-125 453.0 256 85.5
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 1.6e-125 453.0 256 85.5
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 3.5e-125 451.8 255 84.7
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 3.5e-125 451.8 256 83.6
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 3.5e-125 451.8 256 85.2
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 6.0e-125 451.1 249 86.3
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 1.7e-124 449.5 264 82.6
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 1.7e-124 449.5 260 83.5
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 2.3e-124 449.1 255 84.7
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 2.3e-124 449.1 256 82.8
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 3.0e-124 448.7 256 84.0
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 3.9e-124 448.4 256 84.4
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 5.0e-124 448.0 256 84.8
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 6.6e-124 447.6 257 83.7
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 6.6e-124 447.6 256 84.8
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 8.6e-124 447.2 256 83.2
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 8.6e-124 447.2 256 83.2
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 1.1e-123 446.8 256 82.4
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 1.9e-123 446.0 256 84.4
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 3.3e-123 445.3 256 83.2
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 7.3e-123 444.1 256 83.6
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 7.3e-123 444.1 255 82.4
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 1.2e-122 443.4 258 82.2
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.6e-122 443.0 256 82.0
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.6e-122 443.0 256 82.0
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 1.6e-122 443.0 256 82.0
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 2.1e-122 442.6 301 72.8
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 4.7e-122 441.4 258 81.8
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 4.7e-122 441.4 256 81.2
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 4.7e-122 441.4 256 82.0
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 1.4e-121 439.9 256 81.6
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 1.4e-121 439.9 256 81.6
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 1.4e-121 439.9 256 81.6
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 1.4e-121 439.9 256 81.6
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 1.4e-121 439.9 256 81.6
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 1.8e-121 439.5 256 81.2
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 2.3e-121 439.1 256 81.2
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 2.3e-121 439.1 257 82.9
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 4.0e-121 438.3 256 82.0
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 8.9e-121 437.2 256 81.2
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 1.2e-120 436.8 256 80.5
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 2.6e-120 435.6 256 80.5
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 3.4e-120 435.3 256 81.6
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 3.4e-120 435.3 256 81.6
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 3.4e-120 435.3 256 81.6
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 3.4e-120 435.3 256 80.5
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 3.4e-120 435.3 256 80.5
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 4.4e-120 434.9 270 78.1
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 5.8e-120 434.5 270 77.8
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 3.7e-119 431.8 256 81.2
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 4.9e-119 431.4 262 78.2
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 4.1e-118 428.3 261 77.0
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 1.6e-117 426.4 256 79.3
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.1e-117 426.0 256 80.1
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 3.0e-116 422.2 255 78.8
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 6.6e-116 421.0 230 88.3
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 2.5e-115 419.1 255 79.6
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 6.2e-114 414.5 255 77.6
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 3.1e-113 412.1 257 76.3
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 2.6e-112 409.1 253 78.7
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 7.6e-112 407.5 281 74.4
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.3e-111 406.8 256 78.5
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 3.5e-109 398.7 213 86.9
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 4.3e-107 391.7 256 74.2
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 1.6e-106 389.8 250 76.8
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 1.7e-103 379.8 256 73.8
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 2.9e-103 379.0 214 83.2
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 2.4e-102 375.9 231 78.4
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 9.3e-102 374.0 222 80.2
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 4.6e-101 371.7 255 73.7
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 3.4e-96 355.5 257 66.9
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 7.9e-93 344.4 198 83.8
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 3.3e-91 339.0 247 68.4
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 3.3e-91 339.0 251 66.9
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 1.5e-88 330.1 250 66.0
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 4.9e-87 325.1 203 75.9
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 2.4e-86 322.8 251 64.5
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 3.1e-73 279.3 159 82.4
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 6.5e-71 271.6 152 82.9
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 1.4e-70 270.4 169 74.6
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 2.8e-66 256.1 132 92.4
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 1.3e-63 247.3 141 82.3
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 2.3e-60 236.5 257 51.4
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 1.7e-58 230.3 249 47.0
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 3.4e-56 222.6 153 71.9
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 1.9e-54 216.9 198 59.6
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.4e-52 210.7 112 89.3
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 6.7e-52 208.4 116 80.2
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 7.0e-49 198.4 114 82.5
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 2.6e-48 196.4 156 62.8
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 2.6e-48 196.4 105 88.6
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 3.5e-48 196.1 268 41.0
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 2.5e-46 189.9 105 86.7
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.0e-44 184.5 256 44.9
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 3.7e-42 176.0 105 81.9
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 4.8e-42 175.6 105 80.0
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 4.1e-41 172.6 104 81.7
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 5.7e-35 152.1 91 75.8
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.8e-33 147.1 116 64.7
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 1.2e-29 134.4 67 98.5
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.8e-25 120.6 102 59.8
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.7e-23 114.0 96 62.5
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 1.0e-20 104.8 59 83.1
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 1.7e-15 87.4 55 74.5
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 1.2e-13 81.3 60 70.0
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 9.2e-09 65.1 40 82.5


User provided reference genes

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