Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00159 Erythranthe guttata HOM05D005039 ORTHO05D006145 1.3e-258 896.0 469 100.0
SGA_v2.0_scaffold188G40301 Striga asiatica HOM05D005039 ORTHO05D006145 2.6e-251 871.7 469 96.2
SalBow7G2894 Salvia bowleyana HOM05D005039 ORTHO05D006145 3.6e-245 851.3 469 93.0
MSTRG.24939 Avicennia marina HOM05D005039 ORTHO05D006145 1.0e-244 849.7 469 93.0
Dinv29126 Davidia involucrata HOM05D005039 ORTHO05D006145 3.6e-237 824.7 469 90.4
CANSAT21G2526 Cannabis sativa HOM05D005039 ORTHO05D006145 8.0e-237 823.5 469 90.4
GSVIVG01024328001 Vitis vinifera HOM05D005039 ORTHO05D006145 1.0e-236 823.2 469 90.6
CSS0008859 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 2.0e-235 818.9 469 91.0
MBI04_g12218_MAGBIO Magnolia biondii HOM05D005039 ORTHO05D006145 1.3e-234 816.2 470 89.1
Nn3g19238 Nelumbo nucifera HOM05D005039 ORTHO05D006145 1.7e-234 815.8 469 89.8
TAR629G1612 Trochodendron aralioides HOM05D005039 ORTHO05D006145 1.7e-234 815.8 469 89.8
Aqoxy1G03063 Aquilegia oxysepala HOM05D005039 ORTHO05D006145 2.8e-234 815.1 468 89.5
TWI79G0887 Tripterygium wilfordii HOM05D005039 ORTHO05D006145 2.8e-234 815.1 469 90.2
MELO3C021899.2 Cucumis melo HOM05D005039 ORTHO05D006145 3.7e-234 814.7 469 89.1
Sopen07g023860 Solanum pennellii HOM05D005039 ORTHO05D006145 1.1e-233 813.1 470 89.6
MD07G1310900 Malus domestica HOM05D005039 ORTHO05D006145 3.1e-233 811.6 469 89.6
Solyc07g045330.3 Solanum lycopersicum HOM05D005039 ORTHO05D006145 3.1e-233 811.6 470 89.4
Sed0001134 Sechium edule HOM05D005039 ORTHO05D006145 4.1e-233 811.2 469 88.7
CAN.G437.12 Capsicum annuum HOM05D005039 ORTHO05D006145 9.1e-233 810.1 470 89.6
CsaV3_2G014060 Cucumis sativus L. HOM05D005039 ORTHO05D006145 2.0e-232 808.9 469 89.3
RcHm_v2.0_Chr1g0384591 Rosa chinensis HOM05D005039 ORTHO05D006145 2.0e-232 808.9 469 89.3
Cfa016075 Carpinus fangiana HOM05D005039 ORTHO05D006145 3.5e-232 808.1 469 89.3
Potri.013G077700 Populus trichocarpa HOM05D005039 ORTHO05D006145 3.5e-232 808.1 470 87.9
FvH4_7g34230 Fragaria vesca HOM05D005039 ORTHO05D006145 5.9e-232 807.4 469 88.7
FAN10G2688 Fragaria x ananassa HOM05D005039 ORTHO05D006145 5.9e-232 807.4 469 88.7
HanXRQChr16g0512151 Helianthus annuus HOM05D005039 ORTHO05D006145 3.8e-231 804.7 469 88.7
Ciclev10031435m.g Citrus clementina HOM05D005039 ORTHO05D006145 6.5e-231 803.9 469 89.8
Manes.08G160900 Manihot esculenta HOM05D005039 ORTHO05D006145 6.5e-231 803.9 469 88.5
FAN01G1789 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.5e-230 802.7 469 88.1
QL09p020758 Quercus lobata HOM05D005039 ORTHO05D006145 1.9e-230 802.4 468 89.1
vmacro06372 Vaccinium macrocarpon HOM05D005039 ORTHO05D006145 1.9e-230 802.4 506 83.6
FAN03G0337 Fragaria x ananassa HOM05D005039 ORTHO05D006145 2.5e-230 802.0 471 88.3
Glyma.11G109900 Glycine max HOM05D005039 ORTHO05D006145 2.5e-230 802.0 469 88.1
Lsat_1_v5_gn_9_47921 Lactuca sativa HOM05D005039 ORTHO05D006145 2.5e-230 802.0 469 88.5
Glyma.12G014800 Glycine max HOM05D005039 ORTHO05D006145 7.2e-230 800.4 469 88.1
Atru.chr12.1876 Acer truncatum HOM05D005039 ORTHO05D006145 2.1e-229 798.9 469 88.5
Ca_26497_v3 Cicer arietinum L. HOM05D005039 ORTHO05D006145 1.0e-228 796.6 469 87.2
Gohir.A02G125900 Gossypium hirsutum HOM05D005039 ORTHO05D006145 1.2e-227 793.1 469 86.4
Gohir.D03G054700 Gossypium hirsutum HOM05D005039 ORTHO05D006145 1.2e-227 793.1 469 86.4
Phvul.011G017800 Phaseolus vulgaris HOM05D005039 ORTHO05D006145 1.2e-227 793.1 469 87.4
Lj3g0003232 Lotus japonicus HOM05D005039 ORTHO05D006145 2.0e-227 792.3 468 87.0
Thecc.05G222600 Theobroma cacao HOM05D005039 ORTHO05D006145 2.0e-227 792.3 469 86.4
Gorai.003G057600 Gossypium raimondii HOM05D005039 ORTHO05D006145 2.6e-227 792.0 469 86.1
Lalb_Chr09g0320081 Lupinus albus HOM05D005039 ORTHO05D006145 3.4e-227 791.6 468 85.9
Hund09811 Selenicereus undatus HOM05D005039 ORTHO05D006145 4.4e-227 791.2 493 84.4
ECA232G0266 Erigeron canadensis HOM05D005039 ORTHO05D006145 7.5e-227 790.4 462 88.1
Nn1g02122 Nelumbo nucifera HOM05D005039 ORTHO05D006145 9.8e-227 790.0 469 87.2
Ah.13g072370 Amaranthus hybridus HOM05D005039 ORTHO05D006145 2.8e-226 788.5 469 88.1
PSO782G0889 Papaver somniferum HOM05D005039 ORTHO05D006145 3.7e-226 788.1 470 86.4
ATR0829G179 Amborella trichopoda HOM05D005039 ORTHO05D006145 6.3e-226 787.3 469 85.7
Medtr5g005440 Medicago truncatula HOM05D005039 ORTHO05D006145 8.3e-226 786.9 468 86.5
Sabra13G0066500 Salix brachista HOM05D005039 ORTHO05D006145 1.4e-225 786.2 506 81.2
Duzib106G2059 Durio zibethinus HOM05D005039 ORTHO05D006145 3.1e-225 785.0 469 86.1
THA.LOC104805716 Tarenaya hassleriana HOM05D005039 ORTHO05D006145 4.1e-225 784.6 469 86.1
PSO063G4466 Papaver somniferum HOM05D005039 ORTHO05D006145 5.4e-225 784.3 470 86.2
EL10Ac3g05043 Beta vulgaris HOM05D005039 ORTHO05D006145 1.9e-222 775.8 545 77.4
Eucgr.K00067 Eucalyptus grandis HOM05D005039 ORTHO05D006145 2.8e-221 771.9 449 89.1
Peaxi162Scf00802g00029 Petunia axillaris HOM05D005039 ORTHO05D006145 1.4e-220 769.6 470 86.6
Nitab4.5_0006992g0040 Nicotiana tabacum HOM05D005039 ORTHO05D006145 6.3e-218 760.8 491 82.9
Sp7g25580 Schrenkiella parvula HOM05D005039 ORTHO05D006145 6.3e-218 760.8 469 83.8
Zm00001eb430290 Zea mays HOM05D005039 ORTHO05D006145 6.3e-218 760.8 469 82.5
Nitab4.5_0009864g0010 Nicotiana tabacum HOM05D005039 ORTHO05D006145 1.1e-217 760.0 470 86.0
AL2G19600 Arabidopsis lyrata HOM05D005039 ORTHO05D006145 1.8e-217 759.2 469 83.2
Carub.0002s1015 Capsella rubella HOM05D005039 ORTHO05D006145 2.4e-217 758.8 469 83.4
Aa31LG2G2190 Aethionema arabicum HOM05D005039 ORTHO05D006145 3.1e-217 758.4 469 83.2
AT1G64990 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 4.1e-217 758.1 469 82.9
Carub.0007s1322 Capsella rubella HOM05D005039 ORTHO05D006145 4.1e-217 758.1 469 84.0
Os04g0600800 Oryza sativa ssp. japonica HOM05D005039 ORTHO05D006145 5.4e-217 757.7 469 82.1
AUR62002093 Chenopodium quinoa HOM05D005039 ORTHO05D006145 9.2e-217 756.9 469 83.8
Thhalv10025115m.g Eutrema salsugineum HOM05D005039 ORTHO05D006145 1.2e-216 756.5 469 82.9
Oeu027894.4 Olea europaea HOM05D005039 ORTHO05D006145 4.5e-216 754.6 492 81.3
C01p23870 Brassica napus HOM05D005039 ORTHO05D006145 5.9e-216 754.2 469 82.7
BcaC09g50566 Brassica carinata HOM05D005039 ORTHO05D006145 7.8e-216 753.8 469 82.7
BolC1t02332H Brassica oleracea HOM05D005039 ORTHO05D006145 7.8e-216 753.8 469 82.7
BcaNung01651 Brassica carinata HOM05D005039 ORTHO05D006145 1.7e-215 752.7 469 82.7
A01p18920 Brassica napus HOM05D005039 ORTHO05D006145 1.7e-215 752.7 469 82.5
Sp5g19320 Schrenkiella parvula HOM05D005039 ORTHO05D006145 2.3e-215 752.3 469 82.1
AT4G27630 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 2.9e-215 751.9 469 82.9
CARHR235330 Cardamine hirsuta HOM05D005039 ORTHO05D006145 3.8e-215 751.5 469 82.3
C02p21070 Brassica napus HOM05D005039 ORTHO05D006145 4.3e-214 748.0 470 82.3
BraA02t06350Z Brassica rapa HOM05D005039 ORTHO05D006145 4.3e-214 748.0 470 82.3
CARHR056390 Cardamine hirsuta HOM05D005039 ORTHO05D006145 4.7e-213 744.6 469 81.9
A02p12960 Brassica napus HOM05D005039 ORTHO05D006145 2.3e-212 742.3 471 82.0
BolC2t08248H Brassica oleracea HOM05D005039 ORTHO05D006145 2.0e-211 739.2 493 78.5
Duzib128G1855 Durio zibethinus HOM05D005039 ORTHO05D006145 5.8e-211 737.6 469 81.2
BraA01t01833Z Brassica rapa HOM05D005039 ORTHO05D006145 3.7e-210 734.9 497 77.7
PGR142G1194 Punica granatum HOM05D005039 ORTHO05D006145 2.4e-209 732.3 441 85.9
Sc13g0011000 Simmondsia chinensis HOM05D005039 ORTHO05D006145 6.2e-205 717.6 418 89.5
Rhsim03G0224300 Rhododendron simsii HOM05D005039 ORTHO05D006145 2.5e-198 695.7 470 79.8
unitig_0.g2070 Utricularia gibba HOM05D005039 ORTHO05D006145 7.3e-198 694.1 461 80.3
ClCG09G017310 Citrullus lanatus HOM05D005039 ORTHO05D006145 1.1e-196 690.3 397 89.4
arahy.Tifrunner.gnm1.ann1.GG16T8 Arachis hypogaea HOM05D005039 ORTHO05D006145 3.4e-195 685.3 418 84.4
arahy.Tifrunner.gnm1.ann1.IZT0PT Arachis hypogaea HOM05D005039 ORTHO05D006145 3.4e-195 685.3 418 84.4
Actinidia08765 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.9e-193 679.5 418 85.4
AUR62028211 Chenopodium quinoa HOM05D005039 ORTHO05D006145 7.3e-190 667.5 423 81.8
CSS0032758 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 8.1e-189 664.1 469 76.8
Mapoly0094s0006 Marchantia polymorpha HOM05D005039 ORTHO05D006145 8.1e-189 664.1 469 71.0
DCAR_020429 Daucus carota HOM05D005039 ORTHO05D006145 6.4e-186 654.4 383 88.8
Cc02_g00100 Coffea canephora HOM05D005039 ORTHO05D006145 9.9e-171 604.0 373 83.6
CiPaw.05G212800 Carya illinoinensis HOM05D005039 ORTHO05D006145 1.2e-168 597.0 350 86.6
VMungo1127G0275 Vigna mungo HOM05D005039 ORTHO05D006145 2.1e-168 596.3 374 82.6
SMO304G0068 Selaginella moellendorffii HOM05D005039 ORTHO05D006145 1.3e-167 593.6 467 65.1
Prupe.2G329100 Prunus persica HOM05D005039 ORTHO05D006145 1.5e-166 590.1 340 91.5
HPP92_014410 Vanilla planifolia HOM05D005039 ORTHO05D006145 1.1e-164 583.9 469 68.2
Psat7g155320 Pisum sativum HOM05D005039 ORTHO05D006145 1.8e-164 583.2 365 84.1
CBR_g72647 Chara braunii HOM05D005039 ORTHO05D006145 2.4e-164 582.8 470 61.7
Lj3A884T54 Lonicera japonica HOM05D005039 ORTHO05D006145 4.3e-158 562.0 324 92.3
BcaB05g25317 Brassica carinata HOM05D005039 ORTHO05D006145 9.1e-140 501.1 312 79.8
MD01G1239200 Malus domestica HOM05D005039 ORTHO05D006145 5.3e-132 475.3 365 69.9
Actinidia34332 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.2e-131 474.2 308 82.8
CDE11G0732 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 1.6e-128 463.8 324 78.1
PGSC0003DMG401017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 3.8e-114 416.0 246 89.8
PGSC0003DMG402017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 7.8e-91 338.6 182 90.7
Actinidia24520 Actinidia chinensis HOM05D005039 ORTHO05D006145 2.3e-87 327.0 173 93.1
Haze_00371 Corylus avellana HOM05D005039 ORTHO05D006145 9.8e-86 321.6 238 73.9
COL.COLO4_15139 Corchorus olitorius HOM05D005039 ORTHO05D006145 2.9e-85 320.1 312 60.3
AagrBONN_evm.TU.Sc2ySwM_369.165 Anthoceros agrestis HOM05D005039 ORTHO05D006145 9.5e-81 305.1 302 57.0
Cre16.g674739 Chlamydomonas reinhardtii HOM05D005039 ORTHO05D006145 4.7e-80 302.8 505 38.0
AagrBONN_evm.TU.Sc2ySwM_117.727 Anthoceros agrestis HOM05D005039 ORTHO05D006145 1.1e-73 281.6 210 60.0
AagrBONN_evm.TU.Sc2ySwM_369.410 Anthoceros agrestis HOM05D005039 ORTHO05D006145 3.4e-70 270.0 294 54.1
BcaC03g14670 Brassica carinata HOM05D005039 ORTHO05D006145 2.1e-67 260.8 160 86.9
EL10Ac3g05835 Beta vulgaris HOM05D005039 ORTHO05D006145 1.7e-58 231.1 195 68.2
BcaB05g24073 Brassica carinata HOM05D005039 ORTHO05D006145 1.5e-57 228.0 138 88.4
CARHR057320 Cardamine hirsuta HOM05D005039 ORTHO05D006145 4.3e-57 226.5 407 41.0
Cc02_g00110 Coffea canephora HOM05D005039 ORTHO05D006145 5.8e-54 216.1 119 95.8
MCO06G137 Micromonas commoda HOM05D005039 ORTHO05D006145 9.0e-47 192.2 332 36.1
SEGI_29432 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 2.6e-46 190.7 111 91.0
PRCOL_00000150 Prasinoderma coloniale HOM05D005039 ORTHO05D006145 1.7e-45 188.0 492 30.5
CDE11G0023 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 1.1e-44 185.3 107 79.4
SEGI_13634 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 6.0e-43 179.5 105 81.0
Cpa.g.sc43.133 Carica papaya HOM05D005039 ORTHO05D006145 2.5e-41 174.1 111 83.8
CSS0027952 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 9.0e-39 165.6 91 92.3
CSS0015728 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 3.7e-32 143.7 83 85.5
Cpa.g.sc43.132 Carica papaya HOM05D005039 ORTHO05D006145 7.2e-28 129.4 74 86.5
COL.COLO4_15138 Corchorus olitorius HOM05D005039 ORTHO05D006145 9.4e-28 129.0 72 84.7
CSS0031224 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 2.7e-27 127.5 74 83.8
ClCG09G017320 Citrullus lanatus HOM05D005039 ORTHO05D006145 1.0e-26 125.6 72 86.1
Carub.0008s0531 Capsella rubella HOM05D005039 ORTHO05D006145 3.0e-26 124.0 81 77.8
Cpa.g.sc43.136 Carica papaya HOM05D005039 ORTHO05D006145 3.0e-26 124.0 72 84.7
Oeu028985.2 Olea europaea HOM05D005039 ORTHO05D006145 7.4e-25 119.4 99 67.7
SHI14975 Sapria himalayana HOM05D000023 ORTHO05D000014 2.4e-23 114.4 79 74.7
Solyc07g045270.2 Solanum lycopersicum HOM05D005039 ORTHO05D006145 1.0e-21 109.0 57 86.0
SEGI_05893 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 2.5e-20 104.4 70 68.6
Zm00001eb027530 Zea mays HOM05D011105 ORTHO05D007705 2.4e-15 87.8 57 80.7
Carub.0008s0533 Capsella rubella HOM05D005039 ORTHO05D006145 2.6e-14 84.3 52 82.7
Potri.019G042201 Populus trichocarpa HOM05D005039 ORTHO05D006145 1.3e-13 82.0 52 86.5
MD01G1239000 Malus domestica HOM05D005039 ORTHO05D006145 2.2e-13 81.3 46 95.7
EL10Ac7g16242 Beta vulgaris HOM05D005039 ORTHO05D006145 2.9e-13 80.9 44 93.2
GSVIVG01028619001 Vitis vinifera HOM05D005039 ORTHO05D048867 2.5e-12 77.8 74 58.1


User provided reference genes

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