Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.C00158 Erythranthe guttata HOM05D005414 ORTHO05D006844 5.7e-133 477.6 250 100.0
SGA_v2.0_scaffold188G40302 Striga asiatica HOM05D005414 ORTHO05D006844 1.4e-94 350.1 244 74.2
MSTRG.24938 Avicennia marina HOM05D005414 ORTHO05D006844 8.9e-94 347.4 234 74.4
SalBow7G3693 Salvia bowleyana HOM05D005414 ORTHO05D006844 8.9e-94 347.4 240 72.1
Cc10_g06420 Coffea canephora HOM05D005414 ORTHO05D006844 1.2e-90 337.0 239 66.5
Solyc04g072050.4 Solanum lycopersicum HOM05D005414 ORTHO05D006844 7.8e-90 334.3 243 67.5
Sopen04g028220 Solanum pennellii HOM05D005414 ORTHO05D006844 7.8e-90 334.3 243 67.5
PGSC0003DMG400031145 Solanum tuberosum HOM05D005414 ORTHO05D006844 7.8e-90 334.3 244 67.2
Actinidia17760 Actinidia chinensis HOM05D005414 ORTHO05D006844 2.5e-88 329.3 237 66.2
Ciclev10002272m.g Citrus clementina HOM05D005414 ORTHO05D006844 2.4e-86 322.8 242 63.2
Rhsim06G0093200 Rhododendron simsii HOM05D005414 ORTHO05D006844 1.2e-85 320.5 237 65.4
CSS0029717 Camellia sinensis var. sinensis HOM05D005414 ORTHO05D006844 3.4e-85 318.9 237 65.4
CSS0025663 Camellia sinensis var. sinensis HOM05D005414 ORTHO05D006844 4.4e-85 318.5 237 65.0
Peaxi162Scf00226g00114 Petunia axillaris HOM05D005414 ORTHO05D006844 7.1e-83 311.2 266 60.2
Oeu061453.3 Olea europaea HOM05D005414 ORTHO05D006844 2.7e-82 309.3 206 73.8
Duzib041G0057 Durio zibethinus HOM05D005414 ORTHO05D006844 3.3e-80 302.4 234 62.8
MD10G1038100 Malus domestica HOM05D005414 ORTHO05D006844 4.3e-80 302.0 245 61.6
Hma1.2p1_2282F.1_g318850 Hydrangea macrophylla HOM05D005414 ORTHO05D006844 5.6e-80 301.6 237 63.3
Potri.002G062600 Populus trichocarpa HOM05D005414 ORTHO05D006844 5.6e-80 301.6 237 64.1
Prupe.8G044100 Prunus persica HOM05D005414 ORTHO05D006844 5.6e-80 301.6 245 61.2
Atru.chr13.1979 Acer truncatum HOM05D005414 ORTHO05D006844 1.3e-79 300.4 241 61.4
Thecc.08G163500 Theobroma cacao HOM05D005414 ORTHO05D006844 2.1e-79 299.7 243 62.6
RcHm_v2.0_Chr6g0273701 Rosa chinensis HOM05D005414 ORTHO05D006844 3.6e-79 298.9 245 61.6
Sabra05G0151200 Salix brachista HOM05D005414 ORTHO05D006844 3.6e-79 298.9 237 59.9
Glyma.20G171300 Glycine max HOM05D005414 ORTHO05D006844 4.8e-79 298.5 243 61.7
CiPaw.16G007400 Carya illinoinensis HOM05D005414 ORTHO05D006844 8.1e-79 297.7 238 60.9
TPR.G17052 Trifolium pratense HOM05D005414 ORTHO05D006844 8.1e-79 297.7 243 59.7
Eucgr.F02672 Eucalyptus grandis HOM05D005414 ORTHO05D006844 1.1e-78 297.4 237 60.8
Lj5g0014662 Lotus japonicus HOM05D005414 ORTHO05D006844 1.8e-78 296.6 243 60.5
arahy.Tifrunner.gnm1.ann1.X1PAW1 Arachis hypogaea HOM05D005414 ORTHO05D006844 2.4e-78 296.2 238 61.8
Medtr1g097430 Medicago truncatula HOM05D005414 ORTHO05D006844 2.4e-78 296.2 238 60.9
unitig_32.g11168 Utricularia gibba HOM05D005414 ORTHO05D006844 4.0e-78 295.4 241 63.1
arahy.Tifrunner.gnm1.ann1.66PYZ2 Arachis hypogaea HOM05D005414 ORTHO05D006844 6.9e-78 294.7 238 61.8
Gohir.A06G116400 Gossypium hirsutum HOM05D005414 ORTHO05D006844 6.9e-78 294.7 240 60.4
Lalb_Chr02g0141631 Lupinus albus HOM05D005414 ORTHO05D006844 6.9e-78 294.7 243 60.1
PSO210G6322 Papaver somniferum HOM05D005414 ORTHO05D006844 1.7e-76 290.0 234 60.7
Psat6g189560 Pisum sativum HOM05D005414 ORTHO05D006844 2.2e-76 289.7 240 59.2
PGR042G0638 Punica granatum HOM05D005414 ORTHO05D006844 2.9e-76 289.3 240 59.6
FvH4_2g12810 Fragaria vesca HOM05D005414 ORTHO05D006844 3.8e-76 288.9 245 59.6
Gorai.010G131400 Gossypium raimondii HOM05D005414 ORTHO05D006844 4.9e-76 288.5 239 59.4
HanXRQChr05g0144171 Helianthus annuus HOM05D005414 ORTHO05D006844 4.9e-76 288.5 237 57.4
Phvul.007G085100 Phaseolus vulgaris HOM05D005414 ORTHO05D006844 8.4e-76 287.7 236 59.3
PSO170G2436 Papaver somniferum HOM05D005414 ORTHO05D006844 1.4e-75 287.0 234 60.7
VMungo0720G1060 Vigna mungo HOM05D005414 ORTHO05D006844 1.9e-75 286.6 243 57.2
FAN27G1467 Fragaria x ananassa HOM05D005414 ORTHO05D006844 2.7e-74 282.7 245 58.8
Gohir.D06G114900 Gossypium hirsutum HOM05D005414 ORTHO05D006844 2.7e-74 282.7 240 58.8
GSVIVG01013697001 Vitis vinifera HOM05D005414 ORTHO05D006844 4.6e-74 282.0 217 62.7
ECA232G1443 Erigeron canadensis HOM05D005414 ORTHO05D006844 1.3e-73 280.4 234 58.5
MBI04_g42207_MAGBIO Magnolia biondii HOM05D005414 ORTHO05D006844 3.3e-72 275.8 260 53.1
vmacro21198 Vaccinium macrocarpon HOM05D005414 ORTHO05D006844 3.3e-72 275.8 206 64.1
Phvul.007G085000 Phaseolus vulgaris HOM05D005414 ORTHO05D006844 4.3e-72 275.4 239 58.2
Solyc04g072031.1 Solanum lycopersicum HOM05D005414 ORTHO05D006844 4.3e-72 275.4 200 66.0
THA.LOC104809748 Tarenaya hassleriana HOM05D005414 ORTHO05D006844 1.5e-69 266.9 246 54.1
Manes.18G096200 Manihot esculenta HOM05D005414 ORTHO05D006844 1.9e-67 260.0 211 60.2
Sc26g0002600 Simmondsia chinensis HOM05D005414 ORTHO05D006844 1.9e-67 260.0 229 53.7
CAN.G564.21 Capsicum annuum HOM05D005414 ORTHO05D006844 2.4e-67 259.6 197 62.4
Os06g0581300 Oryza sativa ssp. japonica HOM05D005414 ORTHO05D006844 7.1e-67 258.1 245 50.2
Zm00001eb385480 Zea mays HOM05D005414 ORTHO05D006844 7.1e-67 258.1 232 51.7
CDE05G1245 Ceratophyllum demersum HOM05D005414 ORTHO05D006844 1.3e-65 253.8 219 53.4
Glyma.20G171400 Glycine max HOM05D005414 ORTHO05D006844 1.3e-65 253.8 245 55.1
Nitab4.5_0001000g0190 Nicotiana tabacum HOM05D005414 ORTHO05D006844 8.7e-65 251.1 237 56.1
QL02p036452 Quercus lobata HOM05D005414 ORTHO05D006844 1.1e-64 250.8 225 56.0
Nn5g28873 Nelumbo nucifera HOM05D005414 ORTHO05D000799 2.5e-64 249.6 196 60.2
BolC5t30882H Brassica oleracea HOM05D005414 ORTHO05D006844 4.3e-64 248.8 240 53.8
BcaNung07190 Brassica carinata HOM05D005414 ORTHO05D006844 7.4e-64 248.1 240 53.3
TAR628G0132 Trochodendron aralioides HOM05D005414 ORTHO05D000799 7.4e-64 248.1 197 58.9
BcaNung07397 Brassica carinata HOM05D005414 ORTHO05D006844 1.3e-63 247.3 240 53.3
TWI60G0913 Tripterygium wilfordii HOM05D005414 ORTHO05D006844 1.6e-63 246.9 211 60.2
C05p21870 Brassica napus HOM05D005414 ORTHO05D006844 2.8e-63 246.1 240 52.9
DCAR_009609 Daucus carota HOM05D005414 ORTHO05D006844 2.8e-63 246.1 179 64.2
Sed0023257 Sechium edule HOM05D005414 ORTHO05D006844 2.8e-63 246.1 239 52.7
CDE05G3275 Ceratophyllum demersum HOM05D005414 ORTHO05D006844 6.2e-63 245.0 229 51.5
A09p41990 Brassica napus HOM05D005414 ORTHO05D006844 8.1e-63 244.6 239 52.3
BraA09t39686Z Brassica rapa HOM05D005414 ORTHO05D006844 8.1e-63 244.6 239 52.3
CsaV3_6G004870 Cucumis sativus L. HOM05D005414 ORTHO05D006844 1.1e-62 244.2 250 49.6
Aqoxy5G02011 Aquilegia oxysepala HOM05D005414 ORTHO05D006844 1.8e-62 243.4 197 58.4
Sp1g20260 Schrenkiella parvula HOM05D005414 ORTHO05D006844 4.0e-62 242.3 238 52.9
Thhalv10008541m.g Eutrema salsugineum HOM05D005414 ORTHO05D006844 6.9e-62 241.5 239 52.7
MELO3C030042.2 Cucumis melo HOM05D005414 ORTHO05D006844 2.0e-61 240.0 238 50.4
Carub.0001s2226 Capsella rubella HOM05D005414 ORTHO05D006844 2.6e-61 239.6 238 52.9
AL1G36290 Arabidopsis lyrata HOM05D005414 ORTHO05D006844 3.4e-61 239.2 238 52.5
Aa31LG7G6700 Aethionema arabicum HOM05D005414 ORTHO05D006844 6.5e-60 235.0 233 49.8
AT1G22750 Arabidopsis thaliana HOM05D005414 ORTHO05D006844 6.5e-60 235.0 237 51.5
QL02p036925 Quercus lobata HOM05D005414 ORTHO05D006844 2.7e-58 229.6 294 43.5
Nitab4.5_0007691g0020 Nicotiana tabacum HOM05D005414 ORTHO05D006844 3.5e-58 229.2 237 54.9
MELO3C019962.2 Cucumis melo HOM05D005414 ORTHO05D006844 1.3e-57 227.3 244 48.8
CAN.G564.22 Capsicum annuum HOM05D005414 ORTHO05D006844 3.0e-57 226.1 197 56.3
ClCG08G007190 Citrullus lanatus HOM05D005414 ORTHO05D006844 3.0e-57 226.1 238 50.8
Sabra02G0050500 Salix brachista HOM05D005414 ORTHO05D006844 3.9e-57 225.7 207 57.5
CANSAT25G0738 Cannabis sativa HOM05D005414 ORTHO05D006844 4.3e-56 222.2 232 50.4
FAN24G1739 Fragaria x ananassa HOM05D005414 ORTHO05D006844 5.7e-56 221.9 266 47.4
CsaV3_6G004860 Cucumis sativus L. HOM05D005414 ORTHO05D006844 7.4e-56 221.5 245 47.3
HanXRQChr11g0320131 Helianthus annuus HOM05D005414 ORTHO05D006844 2.5e-51 206.5 234 42.7
HanXRQChr11g0320151 Helianthus annuus HOM05D005414 ORTHO05D006844 5.5e-51 205.3 225 44.4
Lsat_1_v5_gn_9_42481 Lactuca sativa HOM05D005414 ORTHO05D006844 7.2e-51 204.9 230 47.8
Lsat_1_v5_gn_4_170780 Lactuca sativa HOM05D005414 ORTHO05D006844 1.2e-50 204.1 233 47.2
Lsat_1_v5_gn_9_42501 Lactuca sativa HOM05D005414 ORTHO05D006844 1.2e-50 204.1 237 42.6
Hund26672 Selenicereus undatus HOM05D005414 ORTHO05D006844 4.6e-50 202.2 174 55.2
HanXRQChr11g0320121 Helianthus annuus HOM05D005414 ORTHO05D006844 1.0e-49 201.1 237 43.0
Potri.005G198600 Populus trichocarpa HOM05D005414 ORTHO05D006844 2.4e-46 189.9 195 51.8
ECA232G3911 Erigeron canadensis HOM05D005414 ORTHO05D006844 3.4e-45 186.0 236 40.7
FAN15G1775 Fragaria x ananassa HOM05D005414 ORTHO05D006844 5.9e-45 185.3 277 41.5
Cpa.g.sc26.122 Carica papaya HOM05D005414 ORTHO05D006844 6.1e-42 175.3 162 53.1
HanXRQChr11g0320141 Helianthus annuus HOM05D005414 ORTHO05D006844 1.0e-41 174.5 237 36.7
Lsat_1_v5_gn_1_83841 Lactuca sativa HOM05D005414 ORTHO05D006844 1.5e-40 170.6 234 40.6
HanXRQChr15g0484681 Helianthus annuus HOM05D005414 ORTHO05D006844 2.0e-40 170.2 232 39.7
HanXRQChr15g0485041 Helianthus annuus HOM05D005414 ORTHO05D006844 4.1e-38 162.5 235 36.2
HanXRQChr07g0196141 Helianthus annuus HOM05D005414 ORTHO05D006844 5.9e-37 158.7 235 38.3
HanXRQChr15g0484961 Helianthus annuus HOM05D005414 ORTHO05D006844 1.4e-35 154.1 232 37.5
Sopen04g028200 Solanum pennellii HOM05D005414 ORTHO05D006844 1.0e-33 147.9 122 58.2
CARHR023110 Cardamine hirsuta HOM05D005414 ORTHO05D006844 1.8e-33 147.1 154 48.7
Lsat_1_v5_gn_2_41300 Lactuca sativa HOM05D005414 ORTHO05D006844 6.7e-33 145.2 203 42.4
ATR1120G143 Amborella trichopoda HOM05D005414 ORTHO05D006844 1.1e-32 144.4 113 59.3
HPP92_008789 Vanilla planifolia HOM05D005414 ORTHO05D006844 7.7e-29 131.7 107 58.9
AUR62032103 Chenopodium quinoa HOM05D005414 ORTHO05D006844 1.0e-28 131.3 183 41.5
ECA232G0081 Erigeron canadensis HOM05D005414 ORTHO05D006844 2.2e-28 130.2 151 40.4
SEGI_39181 Sequoiadendron giganteum HOM05D005414 ORTHO05D006844 1.5e-27 127.5 106 57.5
Pp3c21_15140 Physcomitrium patens HOM05D005414 ORTHO05D006844 4.7e-26 122.5 104 56.7
Lsat_1_v5_gn_1_83961 Lactuca sativa HOM05D005414 ORTHO05D006844 1.4e-25 120.9 205 35.6
EL10Ac1g01628 Beta vulgaris HOM05D005414 ORTHO05D006844 1.5e-24 117.5 238 32.4
TPR.G31416 Trifolium pratense HOM05D005414 ORTHO05D006844 7.5e-24 115.2 106 52.8
AagrBONN_evm.TU.Sc2ySwM_228.1176 Anthoceros agrestis HOM05D005414 ORTHO05D006844 1.4e-22 110.9 116 47.4
SMO331G0045 Selaginella moellendorffii HOM05D005414 ORTHO05D006844 5.3e-22 109.0 104 49.0
Sed0017348 Sechium edule HOM05D005414 ORTHO05D006844 3.8e-20 102.8 155 39.4
CBR_g58808 Chara braunii HOM05D005414 ORTHO05D006844 4.2e-19 99.4 105 51.4
Mapoly0067s0091 Marchantia polymorpha HOM05D005414 ORTHO05D006844 1.2e-18 97.8 106 46.2
AUR62034915 Chenopodium quinoa HOM05D005414 ORTHO05D006844 2.6e-16 90.1 166 36.1
Lsat_1_v5_gn_1_117841 Lactuca sativa HOM05D001315 ORTHO05D004199 7.5e-16 88.6 125 40.8
Lsat_1_v5_gn_1_20800 Lactuca sativa HOM05D000069 ORTHO05D006844 1.7e-15 87.4 121 41.3
Lsat_1_v5_gn_9_72760 Lactuca sativa HOM05D005414 ORTHO05D006844 1.8e-14 84.0 216 27.3
HanXRQChr11g0320081 Helianthus annuus HOM05D005414 ORTHO05D006844 2.9e-12 76.6 71 46.5
Lsat_1_v5_gn_1_83821 Lactuca sativa HOM05D005414 ORTHO05D006844 5.0e-12 75.9 107 42.1
HanXRQChr01g0001821 Helianthus annuus HOM05D005414 ORTHO05D006844 1.6e-10 70.9 113 34.5
ECA233G0443 Erigeron canadensis HOM05D005414 ORTHO05D006844 3.6e-10 69.7 71 42.3
Ah.16g108650 Amaranthus hybridus HOM05D005414 ORTHO05D006844 8.8e-09 65.1 75 48.0
CAN.G564.24 Capsicum annuum HOM05D005414 ORTHO05D006844 3.4e-08 63.2 112 35.7


User provided reference genes

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