Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01887 Erythranthe guttata HOM05D002242 ORTHO05D002275 4.7e-121 438.0 232 100.0
MSTRG.28269 Avicennia marina HOM05D002242 ORTHO05D002275 4.8e-33 145.6 255 42.7
SalBow3G1264 Salvia bowleyana HOM05D002242 ORTHO05D002275 5.8e-31 138.7 253 43.5
SalBow5G1307 Salvia bowleyana HOM05D002242 ORTHO05D002275 2.1e-28 130.2 215 41.9
Oeu043226.1 Olea europaea HOM05D002242 ORTHO05D002275 1.1e-24 117.9 248 39.9
Migut.O00897 Erythranthe guttata HOM05D002242 ORTHO05D002275 1.4e-24 117.5 215 40.5
MSTRG.17354 Avicennia marina HOM05D002242 ORTHO05D002275 2.4e-24 116.7 251 39.8
Oeu007879.1 Olea europaea HOM05D002242 ORTHO05D002275 5.9e-23 112.1 247 40.1
Hma1.2p1_0101F.1_g049310 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 6.5e-22 108.6 269 37.5
Cc02_g39550 Coffea canephora HOM05D002242 ORTHO05D002275 7.2e-21 105.1 249 37.8
Prupe.2G190500 Prunus persica HOM05D002242 ORTHO05D002275 7.9e-20 101.7 243 35.0
Atru.chr5.685 Acer truncatum HOM05D002242 ORTHO05D002275 1.0e-19 101.3 267 36.3
Oeu004958.1 Olea europaea HOM05D002242 ORTHO05D002275 2.3e-19 100.1 253 36.4
Dinv34219 Davidia involucrata HOM05D002242 ORTHO05D002275 3.0e-19 99.8 260 35.4
CSS0021112 Camellia sinensis var. sinensis HOM05D002242 ORTHO05D002275 4.8e-17 92.4 225 37.3
Migut.N01536 Erythranthe guttata HOM05D002242 ORTHO05D002275 1.1e-16 91.3 94 56.4
GSVIVG01027167001 Vitis vinifera HOM05D002242 ORTHO05D002275 1.1e-16 91.3 255 34.9
Actinidia20250 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.8e-16 90.5 259 35.9
Cpa.g.sc96.41 Carica papaya HOM05D002242 ORTHO05D002275 2.4e-16 90.1 244 36.1
Actinidia07972 Actinidia chinensis HOM05D002242 ORTHO05D002275 4.1e-16 89.4 245 35.9
CANSAT56G1040 Cannabis sativa HOM05D002242 ORTHO05D002275 4.1e-16 89.4 241 33.2
Ciclev10021650m.g Citrus clementina HOM05D002242 ORTHO05D002275 9.1e-16 88.2 274 33.2
Oeu004983.1 Olea europaea HOM05D002242 ORTHO05D002275 1.2e-15 87.8 248 33.9
Duzib138G1576 Durio zibethinus HOM05D002242 ORTHO05D002275 3.4e-15 86.3 268 35.4
Hma1.2p1_0390F.1_g142630 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 7.7e-15 85.1 242 34.7
Peaxi162Scf00087g02228 Petunia axillaris HOM05D002242 ORTHO05D002275 7.7e-15 85.1 238 35.3
TAR636G3588 Trochodendron aralioides HOM05D002242 ORTHO05D002275 1.0e-14 84.7 243 33.3
Thecc.01G340500 Theobroma cacao HOM05D002242 ORTHO05D002275 1.7e-14 84.0 263 36.1
TAR425G0001 Trochodendron aralioides HOM05D002242 ORTHO05D002275 1.7e-14 84.0 220 35.5
FAN10G2930 Fragaria x ananassa HOM05D002242 ORTHO05D002275 2.2e-14 83.6 252 32.9
FAN10G3865 Fragaria x ananassa HOM05D002242 ORTHO05D002275 2.2e-14 83.6 248 33.5
Manes.05G021600 Manihot esculenta HOM05D002242 ORTHO05D002275 2.2e-14 83.6 243 33.3
FAN03G2616 Fragaria x ananassa HOM05D002242 ORTHO05D002275 2.9e-14 83.2 238 35.3
MBI06_g38007_MAGBIO Magnolia biondii HOM05D002242 ORTHO05D002275 2.9e-14 83.2 254 32.3
SGA_v2.0_scaffold232G43549 Striga asiatica HOM05D002242 ORTHO05D002275 2.9e-14 83.2 234 36.3
FAN01G2189 Fragaria x ananassa HOM05D002242 ORTHO05D002275 3.8e-14 82.8 247 33.2
Sopen01g039800 Solanum pennellii HOM05D002242 ORTHO05D002275 3.8e-14 82.8 228 33.8
RcHm_v2.0_Chr1g0360071 Rosa chinensis HOM05D002242 ORTHO05D002275 5.0e-14 82.4 253 32.0
Sabra02G0140300 Salix brachista HOM05D002242 ORTHO05D002275 5.0e-14 82.4 238 33.6
Solyc01g096080.3 Solanum lycopersicum HOM05D002242 ORTHO05D002275 5.0e-14 82.4 228 33.8
Dinv32603 Davidia involucrata HOM05D002242 ORTHO05D002275 1.1e-13 81.3 239 35.6
FvH4_7g16850 Fragaria vesca HOM05D002242 ORTHO05D002275 1.1e-13 81.3 245 33.1
DCAR_005401 Daucus carota HOM05D002242 ORTHO05D002275 1.4e-13 80.9 253 34.0
HanXRQChr16g0524311 Helianthus annuus HOM05D002242 ORTHO05D002275 3.2e-13 79.7 242 31.8
Glyma.07G054700 Glycine max HOM05D002242 ORTHO05D002275 7.2e-13 78.6 246 35.8
DCAR_025263 Daucus carota HOM05D002242 ORTHO05D002275 9.4e-13 78.2 228 35.5
Glyma.03G258400 Glycine max HOM05D002242 ORTHO05D002275 9.4e-13 78.2 238 31.5
Gohir.A11G097800 Gossypium hirsutum HOM05D002242 ORTHO05D002275 9.4e-13 78.2 268 33.6
Peaxi162Scf00345g00124 Petunia axillaris HOM05D002242 ORTHO05D002275 9.4e-13 78.2 255 35.3
SGA_v2.0_scaffold22G09962 Striga asiatica HOM05D002242 ORTHO05D002275 9.4e-13 78.2 227 34.8
Nitab4.5_0010712g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 1.2e-12 77.8 251 33.9
Psat3g001920 Pisum sativum HOM05D002242 ORTHO05D002275 1.2e-12 77.8 239 32.2
CiPaw.01G077500 Carya illinoinensis HOM05D002242 ORTHO05D002275 1.6e-12 77.4 254 33.1
CAN.G1415.21 Capsicum annuum HOM05D002242 ORTHO05D002275 2.1e-12 77.0 237 33.3
Sopen05g028980 Solanum pennellii HOM05D002242 ORTHO05D002275 2.7e-12 76.6 230 30.0
PGSC0003DMG400007035 Solanum tuberosum HOM05D002242 ORTHO05D002275 4.7e-12 75.9 220 32.7
Glyma.16G023500 Glycine max HOM05D002242 ORTHO05D002275 6.1e-12 75.5 249 32.5
Lsat_1_v5_gn_4_33660 Lactuca sativa HOM05D002242 ORTHO05D002275 6.1e-12 75.5 265 33.2
QL09p008666 Quercus lobata HOM05D002242 ORTHO05D002275 7.9e-12 75.1 93 49.5
Sabra14G0073600 Salix brachista HOM05D002242 ORTHO05D002275 7.9e-12 75.1 246 33.3
FAN06G1161 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.0e-11 74.7 251 32.3
Manes.01G244900 Manihot esculenta HOM05D002242 ORTHO05D002275 1.0e-11 74.7 258 32.2
FAN06G0152 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.4e-11 74.3 245 32.2
Nitab4.5_0003046g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 1.4e-11 74.3 86 54.7
QL08p045696 Quercus lobata HOM05D002242 ORTHO05D002275 1.4e-11 74.3 246 33.7
Ah.05g179410 Amaranthus hybridus HOM05D002242 ORTHO05D002275 1.8e-11 73.9 135 43.0
PGSC0003DMG400000119 Solanum tuberosum HOM05D002242 ORTHO05D002275 1.8e-11 73.9 225 31.1
Medtr7g117695 Medicago truncatula HOM05D002242 ORTHO05D002275 2.3e-11 73.6 242 33.5
Nitab4.5_0001763g0050 Nicotiana tabacum HOM05D002242 ORTHO05D002275 2.3e-11 73.6 255 33.3
Gohir.D11G102500 Gossypium hirsutum HOM05D002242 ORTHO05D002275 3.0e-11 73.2 258 33.7
Ca_09517_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 3.9e-11 72.8 240 33.3
unitig_899.g14793 Utricularia gibba HOM05D002242 ORTHO05D002275 3.9e-11 72.8 222 35.1
Prupe.2G309000 Prunus persica HOM05D002242 ORTHO05D002275 5.1e-11 72.4 236 31.8
Potri.014G100200 Populus trichocarpa HOM05D002242 ORTHO05D002275 6.7e-11 72.0 269 30.9
FAN03G3456 Fragaria x ananassa HOM05D002242 ORTHO05D002275 8.8e-11 71.6 232 32.3
MD01G1083500 Malus domestica HOM05D002242 ORTHO05D002275 8.8e-11 71.6 242 32.6
Potri.002G172900 Populus trichocarpa HOM05D002242 ORTHO05D002275 8.8e-11 71.6 257 32.3
Haze_15674 Corylus avellana HOM05D002242 ORTHO05D002275 1.1e-10 71.2 238 32.8
Ca_12786_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 1.5e-10 70.9 220 31.4
Medtr8g027435 Medicago truncatula HOM05D002242 ORTHO05D002275 1.5e-10 70.9 105 45.7
Nitab4.5_0004497g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 1.5e-10 70.9 86 52.3
Dinv37328 Davidia involucrata HOM05D002242 ORTHO05D002275 2.0e-10 70.5 98 48.0
Solyc05g050550.4 Solanum lycopersicum HOM05D002242 ORTHO05D002275 2.0e-10 70.5 225 30.2
TWI23G0291 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 2.0e-10 70.5 216 33.3
unitig_62.g23788 Utricularia gibba HOM05D002242 ORTHO05D002275 2.0e-10 70.5 222 32.0
TWI59G0079 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 2.6e-10 70.1 221 33.9
VMungo0647G2336 Vigna mungo HOM05D002242 ORTHO05D002275 3.3e-10 69.7 242 30.6
MD07G1286900 Malus domestica HOM05D002242 ORTHO05D002275 4.4e-10 69.3 219 32.9
Actinidia08657 Actinidia chinensis HOM05D002242 ORTHO05D002275 5.7e-10 68.9 98 44.9
COL.COLO4_06225 Corchorus olitorius HOM05D002242 ORTHO05D002275 5.7e-10 68.9 272 30.9
Hund27189 Selenicereus undatus HOM05D002242 ORTHO05D002275 5.7e-10 68.9 249 32.9
Gohir.A07G136800 Gossypium hirsutum HOM05D002242 ORTHO05D002275 7.4e-10 68.6 254 33.1
Lalb_Chr18g0044551 Lupinus albus HOM05D002242 ORTHO05D002275 7.4e-10 68.6 227 31.7
AUR62004507 Chenopodium quinoa HOM05D002242 ORTHO05D002275 9.7e-10 68.2 124 44.4
Glyma.19G257000 Glycine max HOM05D002242 ORTHO05D002275 9.7e-10 68.2 237 32.1
EL10Ac1g00249 Beta vulgaris HOM05D002242 ORTHO05D002275 1.7e-09 67.4 195 34.9
Lsat_1_v5_gn_6_85600 Lactuca sativa HOM05D002242 ORTHO05D002275 1.7e-09 67.4 103 44.7
MD07G1152200 Malus domestica HOM05D002242 ORTHO05D002275 1.7e-09 67.4 239 32.2
Dinv29268 Davidia involucrata HOM05D002242 ORTHO05D002275 2.2e-09 67.0 220 31.4
FAN01G0248 Fragaria x ananassa HOM05D002242 ORTHO05D002275 2.2e-09 67.0 232 31.9
HanXRQChr17g0563391 Helianthus annuus HOM05D002242 ORTHO05D002275 2.2e-09 67.0 239 36.0
Nn1g00284 Nelumbo nucifera HOM05D002242 ORTHO05D002275 3.7e-09 66.2 246 29.7
Gorai.007G109600 Gossypium raimondii HOM05D002242 ORTHO05D002275 4.8e-09 65.9 244 32.4
Manes.02G144300 Manihot esculenta HOM05D002242 ORTHO05D002275 4.8e-09 65.9 228 27.6
Eucgr.H01540 Eucalyptus grandis HOM05D002242 ORTHO05D002275 6.3e-09 65.5 246 31.3
Eucgr.H01594 Eucalyptus grandis HOM05D002242 ORTHO05D002275 6.3e-09 65.5 246 31.3
Hma1.2p1_0404F.1_g145270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 6.3e-09 65.5 97 42.3
Hma1.2p1_1587F.1_g292270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 6.3e-09 65.5 97 42.3
Gohir.D07G142066 Gossypium hirsutum HOM05D002242 ORTHO05D002275 8.2e-09 65.1 258 31.0
Gorai.008G268100 Gossypium raimondii HOM05D002242 ORTHO05D002275 8.2e-09 65.1 245 29.8
Psat4g214600 Pisum sativum HOM05D002242 ORTHO05D002275 8.2e-09 65.1 89 44.9
Sc01g0002560 Simmondsia chinensis HOM05D002242 ORTHO05D002275 8.2e-09 65.1 209 34.0
FAN06G4446 Fragaria x ananassa HOM05D002242 ORTHO05D002275 1.1e-08 64.7 215 31.6
Gorai.001G153800 Gossypium raimondii HOM05D002242 ORTHO05D002275 1.1e-08 64.7 123 42.3
PGR142G4389 Punica granatum HOM05D002242 ORTHO05D002275 1.1e-08 64.7 226 28.8
TWI39G0876 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 1.1e-08 64.7 230 30.0
Lj3g0010764 Lotus japonicus HOM05D002242 ORTHO05D002275 1.4e-08 64.3 215 31.6
Gorai.008G126300 Gossypium raimondii HOM05D002242 ORTHO05D002275 2.4e-08 63.5 132 40.9
Aa31LG5G990 Aethionema arabicum HOM05D002242 ORTHO05D002275 3.1e-08 63.2 268 28.4
Duzib084G0563 Durio zibethinus HOM05D002242 ORTHO05D002275 3.1e-08 63.2 247 27.9
Gohir.A12G113100 Gossypium hirsutum HOM05D002242 ORTHO05D002275 3.1e-08 63.2 132 40.9
MD01G1217700 Malus domestica HOM05D002242 ORTHO05D002275 3.1e-08 63.2 230 30.0
ClCG06G002630 Citrullus lanatus HOM05D002242 ORTHO05D002275 4.1e-08 62.8 208 31.2
Gohir.A12G249200 Gossypium hirsutum HOM05D002242 ORTHO05D002275 4.1e-08 62.8 246 30.1
Potri.015G011900 Populus trichocarpa HOM05D002242 ORTHO05D002275 4.1e-08 62.8 68 52.9
Thecc.03G200400 Theobroma cacao HOM05D002242 ORTHO05D002275 4.1e-08 62.8 253 28.5
Lalb_Chr10g0100621 Lupinus albus HOM05D002242 ORTHO05D002275 5.3e-08 62.4 242 30.2
BcaB01g02293 Brassica carinata HOM05D002242 ORTHO05D002275 7.0e-08 62.0 278 28.8
Gohir.D12G250000 Gossypium hirsutum HOM05D002242 ORTHO05D002275 7.0e-08 62.0 245 29.4
TWI14G0218 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 7.0e-08 62.0 220 31.8
CiPaw.06G045500 Carya illinoinensis HOM05D002242 ORTHO05D002275 9.1e-08 61.6 216 31.0
Haze_00202 Corylus avellana HOM05D002242 ORTHO05D002275 9.1e-08 61.6 238 31.1
Manes.01G184600 Manihot esculenta HOM05D002242 ORTHO05D002275 9.1e-08 61.6 79 49.4
Phvul.001G075100 Phaseolus vulgaris HOM05D002242 ORTHO05D002275 9.1e-08 61.6 204 30.4
THA.LOC104817057 Tarenaya hassleriana HOM05D002242 ORTHO05D002275 9.1e-08 61.6 262 32.8
Actinidia28112 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.2e-07 61.2 204 35.8
arahy.Tifrunner.gnm1.ann1.QL2KDB Arachis hypogaea HOM05D002242 ORTHO05D002275 1.2e-07 61.2 256 30.1
ECA234G4607 Erigeron canadensis HOM05D002242 ORTHO05D002275 1.2e-07 61.2 223 37.2
Peaxi162Scf00716g00032 Petunia axillaris HOM05D000078 ORTHO05D000025 1.5e-07 60.8 80 51.2
vmacro06390 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 1.5e-07 60.8 83 48.2
vmacro13169 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 1.5e-07 60.8 134 39.6
VMungo0540G1854 Vigna mungo HOM05D002242 ORTHO05D002275 1.5e-07 60.8 91 48.4
Lj4g0010373 Lotus japonicus HOM05D002242 ORTHO05D002275 2.0e-07 60.5 212 29.7
FvH4_7g31360 Fragaria vesca HOM05D002242 ORTHO05D002275 2.6e-07 60.1 220 31.4
FAN06G3788 Fragaria x ananassa HOM05D002242 ORTHO05D002275 2.6e-07 60.1 220 31.4
Lj1g0020065 Lotus japonicus HOM05D002242 ORTHO05D002275 2.6e-07 60.1 232 31.9
TPR.G12108 Trifolium pratense HOM05D002242 ORTHO05D002275 2.6e-07 60.1 227 29.1
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 3.4e-07 59.7 282 28.7
CsaV3_6G008510 Cucumis sativus L. HOM05D002242 ORTHO05D002275 3.4e-07 59.7 213 30.5
Rhsim03G0209500 Rhododendron simsii HOM05D002242 ORTHO05D002275 3.4e-07 59.7 246 27.6
TPR.G20223 Trifolium pratense HOM05D002242 ORTHO05D002275 3.4e-07 59.7 244 30.3
CiPaw.05G197700 Carya illinoinensis HOM05D002242 ORTHO05D002275 4.5e-07 59.3 206 31.6
Sabra15G0009600 Salix brachista HOM05D002242 ORTHO05D002275 4.5e-07 59.3 203 30.5
THA.LOC104825883 Tarenaya hassleriana HOM05D002242 ORTHO05D002275 4.5e-07 59.3 283 29.7
Cfa016239 Carpinus fangiana HOM05D002242 ORTHO05D002275 5.9e-07 58.9 101 43.6
Gohir.D12G116600 Gossypium hirsutum HOM05D002242 ORTHO05D002275 5.9e-07 58.9 132 39.4
Lalb_Chr17g0342761 Lupinus albus HOM05D002242 ORTHO05D002275 5.9e-07 58.9 99 40.4
Phvul.006G114400 Phaseolus vulgaris HOM05D002242 ORTHO05D002275 5.9e-07 58.9 66 57.6
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 7.7e-07 58.5 259 29.3
Eucgr.E00045 Eucalyptus grandis HOM05D002242 ORTHO05D002275 7.7e-07 58.5 102 42.2
PSO782G1347 Papaver somniferum HOM05D002242 ORTHO05D002275 7.7e-07 58.5 262 33.6
TPR.G4734 Trifolium pratense HOM05D002242 ORTHO05D002275 7.7e-07 58.5 82 43.9
AT4G00950 Arabidopsis thaliana HOM05D002242 ORTHO05D002275 1.3e-06 57.8 286 27.6
Rhsim01G0174300 Rhododendron simsii HOM05D002242 ORTHO05D002275 1.3e-06 57.8 228 29.8
Ah.13g070390 Amaranthus hybridus HOM05D002242 ORTHO05D002275 1.7e-06 57.4 71 50.7
ATR0602G287 Amborella trichopoda HOM05D002242 ORTHO05D002275 1.7e-06 57.4 102 41.2
PSO478G1176 Papaver somniferum HOM05D002242 ORTHO05D002275 1.7e-06 57.4 267 28.1
Potri.012G016700 Populus trichocarpa HOM05D002242 ORTHO05D002275 1.7e-06 57.4 69 49.3
RcHm_v2.0_Chr1g0380431 Rosa chinensis HOM05D002242 ORTHO05D002275 1.7e-06 57.4 232 29.7
Glyma.04G234700 Glycine max HOM05D002242 ORTHO05D002275 2.2e-06 57.0 213 29.1
Peaxi162Scf00740g00136 Petunia axillaris HOM05D002242 ORTHO05D002275 2.2e-06 57.0 200 31.5
Ciclev10021848m.g Citrus clementina HOM05D002242 ORTHO05D002275 2.9e-06 56.6 268 28.7
Sp4g28580 Schrenkiella parvula HOM05D010353 ORTHO05D011141 2.9e-06 56.6 79 45.6
Thhalv10001658m.g Eutrema salsugineum HOM05D010353 ORTHO05D011141 3.8e-06 56.2 233 28.8
Medtr1g007905 Medicago truncatula HOM05D002242 ORTHO05D002275 3.8e-06 56.2 249 27.7
BcaC04g24107 Brassica carinata HOM05D002242 ORTHO05D002275 5.0e-06 55.8 282 28.0
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 5.0e-06 55.8 282 28.0
CARHR141870 Cardamine hirsuta HOM05D010353 ORTHO05D011141 5.0e-06 55.8 81 45.7
ClCG01G000400 Citrullus lanatus HOM05D002242 ORTHO05D002275 5.0e-06 55.8 105 45.7
MELO3C022264.2 Cucumis melo HOM05D000003 ORTHO05D000004 6.5e-06 55.5 67 49.3
CsaV3_3G007960 Cucumis sativus L. HOM05D002242 ORTHO05D002275 6.5e-06 55.5 104 41.3
unitig_578.g16275 Utricularia gibba HOM05D002242 ORTHO05D002275 6.5e-06 55.5 186 32.8
Phvul.009G051700 Phaseolus vulgaris HOM05D002242 ORTHO05D002275 8.5e-06 55.1 229 30.1


User provided reference genes

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