Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 4.7e-21 103.6 52 100.0
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 8.8e-12 72.8 52 71.2
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 1.2e-11 72.4 52 67.3
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 2.0e-11 71.6 52 67.3
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 9.8e-11 69.3 52 67.3
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 9.8e-11 69.3 52 63.5
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 1.3e-10 68.9 52 63.5
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 1.3e-10 68.9 52 67.3
unitig_52.g17066 Utricularia gibba HOM05D008687 ORTHO05D010822 2.8e-10 67.8 44 68.2
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 8.3e-10 66.2 52 61.5
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 8.3e-10 66.2 52 61.5
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 8.3e-10 66.2 52 59.6
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 1.8e-09 65.1 51 62.7
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 1.8e-09 65.1 52 63.5
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 2.4e-09 64.7 53 66.0
SalBow3G0692 Salvia bowleyana HOM05D008687 ORTHO05D010822 3.1e-09 64.3 33 87.9
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 4.1e-09 63.9 52 65.4
Phvul.010G111800 Phaseolus vulgaris HOM05D008687 ORTHO05D010822 7.0e-09 63.2 52 53.8
Glyma.07G057502 Glycine max HOM05D008687 ORTHO05D010822 1.6e-08 62.0 52 53.8
Lalb_Chr17g0342441 Lupinus albus HOM05D008687 ORTHO05D010822 1.6e-08 62.0 52 55.8
Lalb_Chr10g0100361 Lupinus albus HOM05D008687 ORTHO05D010822 2.7e-08 61.2 52 53.8
Potri.014G095901 Populus trichocarpa HOM05D008687 ORTHO05D010822 3.5e-08 60.8 52 61.5
Sc01g0002900 Simmondsia chinensis HOM05D008687 ORTHO05D010822 4.5e-08 60.5 52 57.7
TPR.G20504 Trifolium pratense HOM05D008687 ORTHO05D010822 1.0e-07 59.3 52 53.8
Thecc.01G345800 Theobroma cacao HOM05D008687 ORTHO05D010822 1.7e-07 58.5 52 59.6
Nn1g02205 Nelumbo nucifera HOM05D008687 ORTHO05D010822 2.9e-07 57.8 45 60.0
Glyma.16G026500 Glycine max HOM05D008687 ORTHO05D010822 5.0e-07 57.0 52 48.1
Psat4g160200 Pisum sativum HOM05D008687 ORTHO05D010822 6.5e-07 56.6 52 53.8
Ca_26755_v3 Cicer arietinum L. HOM05D008687 ORTHO05D010822 8.5e-07 56.2 52 53.8
Lj3g0001832 Lotus japonicus HOM05D008687 ORTHO05D010822 1.1e-06 55.8 52 50.0
DCAR_006145 Daucus carota HOM05D008687 ORTHO05D010822 1.9e-06 55.1 52 51.9
Gohir.A07G139100 Gossypium hirsutum HOM05D008687 ORTHO05D010822 2.5e-06 54.7 43 62.8
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 3.2e-06 54.3 52 53.8
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 3.2e-06 54.3 52 53.8
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 3.2e-06 54.3 52 53.8
Gorai.001G156200 Gossypium raimondii HOM05D008687 ORTHO05D010822 4.2e-06 53.9 41 58.5
Cc02_g39090 Coffea canephora HOM05D008687 ORTHO05D010822 5.5e-06 53.5 33 72.7
COL.COLO4_06317 Corchorus olitorius HOM05D008687 ORTHO05D010822 5.5e-06 53.5 52 51.9
Gohir.D07G144200 Gossypium hirsutum HOM05D008687 ORTHO05D010822 9.5e-06 52.8 41 56.1


User provided reference genes

Program Settings