Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01769 Erythranthe guttata HOM05D003837 ORTHO05D004751 1.2e-152 543.1 269 100.0
Migut.B01768 Erythranthe guttata HOM05D003837 ORTHO05D004751 3.2e-137 491.9 271 88.6
Nitab4.5_0000386g0040 Nicotiana tabacum HOM05D003837 ORTHO05D004751 3.9e-135 485.0 269 87.0
MSTRG.17276 Avicennia marina HOM05D003837 ORTHO05D004751 6.6e-135 484.2 269 86.2
Oeu010619.1 Olea europaea HOM05D003837 ORTHO05D004751 1.5e-134 483.0 269 86.2
Gorai.004G042000 Gossypium raimondii HOM05D003837 ORTHO05D004751 1.9e-134 482.6 269 86.2
Sopen10g006240 Solanum pennellii HOM05D003837 ORTHO05D004751 3.3e-134 481.9 269 86.2
Gohir.D08G043400 Gossypium hirsutum HOM05D003837 ORTHO05D004751 7.3e-134 480.7 269 85.5
Nitab4.5_0002811g0010 Nicotiana tabacum HOM05D003837 ORTHO05D004751 7.3e-134 480.7 269 86.2
Solyc10g012410.3 Solanum lycopersicum HOM05D003837 ORTHO05D004751 9.5e-134 480.3 269 86.6
SalBow3G2595 Salvia bowleyana HOM05D003837 ORTHO05D004751 1.2e-133 479.9 270 85.9
Gohir.A08G032500 Gossypium hirsutum HOM05D003837 ORTHO05D004751 1.6e-133 479.6 269 85.9
PGSC0003DMG400006508 Solanum tuberosum HOM05D003837 ORTHO05D004751 2.1e-133 479.2 269 85.9
Duzib138G0194 Durio zibethinus HOM05D003837 ORTHO05D004751 6.8e-132 474.2 269 84.4
Thecc.01G357600 Theobroma cacao HOM05D003837 ORTHO05D004751 1.2e-131 473.4 269 84.4
CAN.G116.14 Capsicum annuum HOM05D003837 ORTHO05D004751 2.6e-131 472.2 269 85.1
TAR629G3438 Trochodendron aralioides HOM05D003837 ORTHO05D004751 2.6e-131 472.2 269 83.6
CiPaw.01G063000 Carya illinoinensis HOM05D003837 ORTHO05D004751 9.8e-131 470.3 269 84.0
Cc02_g38180 Coffea canephora HOM05D003837 ORTHO05D004751 9.8e-131 470.3 269 84.4
unitig_61.g26385 Utricularia gibba HOM05D003837 ORTHO05D004751 1.3e-130 469.9 267 85.0
Lsat_1_v5_gn_7_4380 Lactuca sativa HOM05D003837 ORTHO05D004751 1.7e-130 469.5 266 83.8
GSVIVG01026949001 Vitis vinifera HOM05D003837 ORTHO05D004751 2.9e-130 468.8 269 83.6
AL4G45220 Arabidopsis lyrata HOM05D003837 ORTHO05D004751 8.3e-130 467.2 269 82.9
Dinv43830 Davidia involucrata HOM05D003837 ORTHO05D004751 2.4e-129 465.7 269 83.3
Sp4g28060 Schrenkiella parvula HOM05D003837 ORTHO05D004751 3.2e-129 465.3 269 82.5
arahy.Tifrunner.gnm1.ann1.8FQY9T Arachis hypogaea HOM05D003837 ORTHO05D004751 4.1e-129 464.9 269 81.8
CANSAT56G1308 Cannabis sativa HOM05D003837 ORTHO05D004751 4.1e-129 464.9 269 81.8
Hma1.2p1_0780F.1_g216730 Hydrangea macrophylla HOM05D003837 ORTHO05D004751 5.4e-129 464.5 267 83.1
Potri.014G086100 Populus trichocarpa HOM05D003837 ORTHO05D004751 5.4e-129 464.5 269 83.3
arahy.Tifrunner.gnm1.ann1.LGM3J9 Arachis hypogaea HOM05D003837 ORTHO05D004751 7.0e-129 464.2 269 81.4
MELO3C021202.2 Cucumis melo HOM05D003837 ORTHO05D004751 7.0e-129 464.2 270 83.7
AT2G45990 Arabidopsis thaliana HOM05D003837 ORTHO05D004751 1.2e-128 463.4 269 82.5
ECA236G1077 Erigeron canadensis HOM05D003837 ORTHO05D004751 2.0e-128 462.6 269 81.4
Atru.chr5.511 Acer truncatum HOM05D003837 ORTHO05D004751 2.7e-128 462.2 269 81.0
arahy.Tifrunner.gnm1.ann1.50MGD9 Arachis hypogaea HOM05D003837 ORTHO05D004751 2.7e-128 462.2 269 81.4
Psat3g107800 Pisum sativum HOM05D003837 ORTHO05D004751 2.7e-128 462.2 269 81.0
QL04p053649 Quercus lobata HOM05D003837 ORTHO05D004751 2.7e-128 462.2 268 82.1
EL10Ac1g00400 Beta vulgaris HOM05D003837 ORTHO05D004751 3.5e-128 461.8 274 81.8
Medtr7g077870 Medicago truncatula HOM05D003837 ORTHO05D004751 4.6e-128 461.5 269 81.0
Sed0000473 Sechium edule HOM05D003837 ORTHO05D004751 4.6e-128 461.5 269 82.2
Lj9A584G62 Lonicera japonica HOM05D003837 ORTHO05D004751 7.8e-128 460.7 267 82.8
Glyma.18G234200 Glycine max HOM05D003837 ORTHO05D004751 1.3e-127 459.9 269 80.7
MBI18_g02839_MAGBIO Magnolia biondii HOM05D003837 ORTHO05D004751 1.3e-127 459.9 269 80.3
Rhsim01G0163300 Rhododendron simsii HOM05D003837 ORTHO05D004751 3.0e-127 458.8 269 81.8
Carub.0004s2869 Capsella rubella HOM05D003837 ORTHO05D004751 3.9e-127 458.4 269 81.4
Sabra14G0062400 Salix brachista HOM05D003837 ORTHO05D004751 3.9e-127 458.4 269 81.4
BcaC02g12159 Brassica carinata HOM05D003837 ORTHO05D004751 6.6e-127 457.6 270 82.2
Thhalv10001586m.g Eutrema salsugineum HOM05D003837 ORTHO05D004751 6.6e-127 457.6 269 80.7
FvH4_7g14620 Fragaria vesca HOM05D003837 ORTHO05D004751 8.6e-127 457.2 269 80.3
FAN06G1674 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.6e-127 457.2 269 80.3
vmacro21886 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 8.6e-127 457.2 269 80.7
vmacro23130 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 8.6e-127 457.2 269 80.7
Phvul.008G061600 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 1.5e-126 456.4 269 80.7
arahy.Tifrunner.gnm1.ann1.MHF7VE Arachis hypogaea HOM05D003837 ORTHO05D004751 1.9e-126 456.1 269 80.3
BraA05t19561Z Brassica rapa HOM05D003837 ORTHO05D004751 1.9e-126 456.1 270 81.9
RcHm_v2.0_Chr1g0356141 Rosa chinensis HOM05D003837 ORTHO05D004751 1.9e-126 456.1 269 80.7
Ah.05g180500 Amaranthus hybridus HOM05D003837 ORTHO05D004751 2.5e-126 455.7 271 80.1
C04p06910 Brassica napus HOM05D003837 ORTHO05D004751 2.5e-126 455.7 270 81.9
Ca_07930_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 2.5e-126 455.7 281 76.9
FAN10G2900 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.5e-126 455.7 269 79.9
Aa31LG1G27400 Aethionema arabicum HOM05D003837 ORTHO05D004751 3.3e-126 455.3 269 80.7
AUR62004375 Chenopodium quinoa HOM05D003837 ORTHO05D004751 4.3e-126 454.9 271 80.8
CARHR141260 Cardamine hirsuta HOM05D003837 ORTHO05D004751 5.6e-126 454.5 269 80.7
Rhsim01G0190400 Rhododendron simsii HOM05D003837 ORTHO05D004751 7.3e-126 454.1 269 81.0
Eucgr.E01551 Eucalyptus grandis HOM05D003837 ORTHO05D004751 9.5e-126 453.8 269 80.3
A05p05980 Brassica napus HOM05D003837 ORTHO05D004751 1.2e-125 453.4 270 81.5
PGR042G3540 Punica granatum HOM05D003837 ORTHO05D004751 2.1e-125 452.6 270 81.1
Manes.01G255600 Manihot esculenta HOM05D003837 ORTHO05D004751 2.8e-125 452.2 263 82.1
AUR62022582 Chenopodium quinoa HOM05D003837 ORTHO05D004751 3.6e-125 451.8 271 79.7
FAN06G4414 Fragaria x ananassa HOM05D003837 ORTHO05D004751 8.1e-125 450.7 275 78.5
PSO017G1131 Papaver somniferum HOM05D003837 ORTHO05D004751 8.1e-125 450.7 269 78.4
FAN01G2145 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.4e-124 449.9 269 78.8
FAN03G2321 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.4e-124 449.9 275 78.5
FAN10G2259 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.8e-124 449.5 275 78.2
MD01G1065200 Malus domestica HOM05D003837 ORTHO05D004751 1.8e-124 449.5 269 78.8
Haze_15524 Corylus avellana HOM05D003837 ORTHO05D004751 1.5e-123 446.4 306 73.5
BolC4t22312H Brassica oleracea HOM05D003837 ORTHO05D004751 3.4e-123 445.3 286 77.3
DCAR_025196 Daucus carota HOM05D003837 ORTHO05D004751 9.8e-123 443.7 269 79.9
FAN01G0904 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.8e-123 443.7 269 78.8
arahy.Tifrunner.gnm1.ann1.1HB2SZ Arachis hypogaea HOM05D003837 ORTHO05D004751 1.9e-121 439.5 269 76.2
arahy.Tifrunner.gnm1.ann1.AX1MHW Arachis hypogaea HOM05D003837 ORTHO05D004751 3.2e-121 438.7 269 78.4
Lalb_Chr04g0253801 Lupinus albus HOM05D003837 ORTHO05D004751 4.1e-121 438.3 267 76.4
PSO063G2236 Papaver somniferum HOM05D003837 ORTHO05D004751 4.1e-121 438.3 261 78.5
Ciclev10021690m.g Citrus clementina HOM05D003837 ORTHO05D004751 5.4e-121 438.0 269 79.2
arahy.Tifrunner.gnm1.ann1.SJDP6S Arachis hypogaea HOM05D003837 ORTHO05D004751 7.1e-121 437.6 269 76.2
VMungo1383G2611 Vigna mungo HOM05D003837 ORTHO05D004751 2.1e-120 436.0 268 76.9
Ciclev10021689m.g Citrus clementina HOM05D003837 ORTHO05D004751 3.5e-120 435.3 269 76.6
CANSAT56G2444 Cannabis sativa HOM05D003837 ORTHO05D004751 1.0e-119 433.7 269 77.0
Actinidia02836 Actinidia chinensis HOM05D003837 ORTHO05D004751 1.7e-119 433.0 275 78.9
Lalb_Chr10g0095951 Lupinus albus HOM05D003837 ORTHO05D004751 2.3e-119 432.6 267 76.4
TPR.G37767 Trifolium pratense HOM05D003837 ORTHO05D004751 6.6e-119 431.0 269 76.2
Os07g0418000 Oryza sativa ssp. japonica HOM05D003837 ORTHO05D004751 1.1e-118 430.3 267 74.2
Lj1g0003798 Lotus japonicus HOM05D003837 ORTHO05D004751 1.9e-118 429.5 269 75.5
Medtr7g077880 Medicago truncatula HOM05D003837 ORTHO05D004751 2.5e-118 429.1 269 75.1
Glyma.18G234300 Glycine max HOM05D003837 ORTHO05D004751 3.3e-118 428.7 269 74.3
Prupe.2G172200 Prunus persica HOM05D003837 ORTHO05D004751 5.6e-118 427.9 269 77.7
TPR.G37852 Trifolium pratense HOM05D003837 ORTHO05D004751 5.6e-118 427.9 269 74.3
ClCG06G003610 Citrullus lanatus HOM05D003837 ORTHO05D004751 7.3e-118 427.6 269 77.3
TWI14G0320 Tripterygium wilfordii HOM05D003837 ORTHO05D004751 7.3e-118 427.6 269 77.3
CsaV3_6G000640 Cucumis sativus L. HOM05D003837 ORTHO05D004751 1.2e-117 426.8 269 78.1
FvH4_7g14540 Fragaria vesca HOM05D003837 ORTHO05D004751 3.6e-117 425.2 269 77.0
THA.LOC104802037 Tarenaya hassleriana HOM05D003837 ORTHO05D004751 3.1e-116 422.2 269 76.6
Psat3g107760 Pisum sativum HOM05D003837 ORTHO05D004751 5.2e-116 421.4 269 73.6
Cfa003906 Carpinus fangiana HOM05D003837 ORTHO05D004751 2.0e-115 419.5 252 80.6
Phvul.008G061500 Phaseolus vulgaris HOM05D003837 ORTHO05D004751 3.4e-115 418.7 267 74.2
Zm00001eb094870 Zea mays HOM05D003837 ORTHO05D004751 3.4e-115 418.7 267 72.3
HPP92_025965 Vanilla planifolia HOM05D003837 ORTHO05D004751 7.6e-115 417.5 269 73.2
Cpa.g.sc11.20 Carica papaya HOM05D003837 ORTHO05D004751 4.9e-114 414.8 269 74.7
VMungo1383G0868 Vigna mungo HOM05D003837 ORTHO05D004751 8.4e-114 414.1 265 74.3
SEGI_21942 Sequoiadendron giganteum HOM05D003837 ORTHO05D004751 1.9e-113 412.9 269 72.5
arahy.Tifrunner.gnm1.ann1.I86G4G Arachis hypogaea HOM05D003837 ORTHO05D004751 3.2e-113 412.1 244 80.3
HanXRQChr04g0121181 Helianthus annuus HOM05D003837 ORTHO05D004751 4.1e-113 411.8 269 73.6
Peaxi162Scf00008g02421 Petunia axillaris HOM05D003837 ORTHO05D004751 4.1e-113 411.8 269 77.7
FAN06G3658 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.6e-112 409.8 269 74.3
COL.COLO4_12726 Corchorus olitorius HOM05D003837 ORTHO05D004751 2.7e-112 409.1 269 76.2
Ca_07931_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 7.8e-112 407.5 269 70.3
CDE05G2325 Ceratophyllum demersum HOM05D003837 ORTHO05D004751 1.0e-111 407.1 266 73.3
RcHm_v2.0_Chr1g0356101 Rosa chinensis HOM05D003837 ORTHO05D004751 3.0e-111 405.6 269 73.2
Hund27264 Selenicereus undatus HOM05D003837 ORTHO05D004751 1.1e-110 403.7 269 71.4
FAN06G0309 Fragaria x ananassa HOM05D003837 ORTHO05D004751 9.6e-110 400.6 269 72.9
FAN06G3536 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.0e-108 395.2 276 69.6
FAN10G0266 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.0e-108 395.2 270 71.5
FAN10G3579 Fragaria x ananassa HOM05D003837 ORTHO05D004751 4.0e-108 395.2 270 71.5
FAN01G2925 Fragaria x ananassa HOM05D003837 ORTHO05D004751 1.5e-107 393.3 276 69.9
HanXRQChr04g0121171 Helianthus annuus HOM05D003837 ORTHO05D004751 1.5e-107 393.3 269 70.3
Pp3c11_2170 Physcomitrium patens HOM05D003837 ORTHO05D004751 3.4e-107 392.1 270 68.5
FAN16G2327 Fragaria x ananassa HOM05D003837 ORTHO05D004751 5.8e-107 391.3 271 69.7
FvH4_3g44250 Fragaria vesca HOM05D003837 ORTHO05D004751 7.6e-107 391.0 271 69.7
Nn1g01565 Nelumbo nucifera HOM05D003837 ORTHO05D004751 7.6e-107 391.0 269 70.3
AagrBONN_evm.TU.Sc2ySwM_228.2910 Anthoceros agrestis HOM05D003837 ORTHO05D004751 1.3e-106 390.2 270 68.1
ATR0680G377 Amborella trichopoda HOM05D003837 ORTHO05D004751 2.9e-106 389.0 235 77.4
FAN11G2601 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.9e-106 389.0 271 69.4
FAN06G3952 Fragaria x ananassa HOM05D003837 ORTHO05D004751 6.4e-106 387.9 276 68.8
SMO118G0280 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 1.4e-105 386.7 269 67.7
AagrBONN_evm.TU.Sc2ySwM_228.5133 Anthoceros agrestis HOM05D003837 ORTHO05D004751 7.1e-105 384.4 269 67.3
arahy.Tifrunner.gnm1.ann1.438NR4 Arachis hypogaea HOM05D003837 ORTHO05D004751 5.1e-103 378.3 272 70.6
Mapoly0002s0196 Marchantia polymorpha HOM05D003837 ORTHO05D004751 6.6e-103 377.9 270 67.0
Pp3c23_10590 Physcomitrium patens HOM05D003837 ORTHO05D004751 6.6e-103 377.9 271 66.8
Ca_07932_v3 Cicer arietinum L. HOM05D003837 ORTHO05D004751 1.5e-102 376.7 269 66.9
Atru.chr5.512 Acer truncatum HOM05D003837 ORTHO05D004751 2.5e-102 375.9 212 83.5
Lj1g0022323 Lotus japonicus HOM05D003837 ORTHO05D004751 2.5e-102 375.9 236 76.3
RcHm_v2.0_Chr1g0356011 Rosa chinensis HOM05D003837 ORTHO05D004751 9.6e-102 374.0 270 67.4
RcHm_v2.0_Chr1g0356041 Rosa chinensis HOM05D003837 ORTHO05D004751 1.8e-100 369.8 270 67.0
RcHm_v2.0_Chr1g0356051 Rosa chinensis HOM05D003837 ORTHO05D004751 9.9e-99 364.0 271 67.2
RcHm_v2.0_Chr1g0355961 Rosa chinensis HOM05D003837 ORTHO05D004751 1.4e-97 360.1 271 65.7
Pp3c24_7060 Physcomitrium patens HOM05D003837 ORTHO05D004751 1.8e-95 353.2 249 67.1
Actinidia02835 Actinidia chinensis HOM05D003837 ORTHO05D004751 8.7e-95 350.9 197 86.8
AUR62004376 Chenopodium quinoa HOM05D003837 ORTHO05D004751 1.6e-93 346.7 211 79.1
CBR_g30756 Chara braunii HOM05D003837 ORTHO05D004751 1.7e-90 336.7 295 58.3
Glyma.09G258500 Glycine max HOM05D003837 ORTHO05D004751 3.9e-87 325.5 217 73.7
FAN10G2608 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.1e-85 319.7 189 78.3
Sc26g0000870 Simmondsia chinensis HOM05D003837 ORTHO05D004751 4.0e-84 315.5 187 78.6
SMO118G0457 Selaginella moellendorffii HOM05D003837 ORTHO05D004751 9.6e-78 294.3 269 55.8
CSS0003015 Camellia sinensis var. sinensis HOM05D003837 ORTHO05D004751 1.4e-63 247.3 189 66.7
FvH4_7g14570 Fragaria vesca HOM05D003837 ORTHO05D004751 8.5e-58 228.0 143 76.2
FAN10G2382 Fragaria x ananassa HOM05D003837 ORTHO05D004751 2.5e-57 226.5 133 78.9
vmacro20932 Vaccinium macrocarpon HOM05D003837 ORTHO05D004751 2.7e-56 223.0 181 63.5
Cre06.g278117 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 3.6e-56 222.6 271 45.0
RcHm_v2.0_Chr1g0356441 Rosa chinensis HOM05D003837 ORTHO05D004751 2.4e-52 209.9 188 61.2
Glyma.09G258400 Glycine max HOM05D003837 ORTHO05D004751 2.6e-51 206.5 127 74.0
MCO05G263 Micromonas commoda HOM05D003837 ORTHO05D004751 2.1e-48 196.8 267 40.8
SGA_v2.0_scaffold95G28830 Striga asiatica HOM05D003837 ORTHO05D004751 1.5e-46 190.7 269 43.5
Cre13.g578900 Chlamydomonas reinhardtii HOM05D003837 ORTHO05D004751 6.8e-39 165.2 278 34.9
arahy.Tifrunner.gnm1.ann1.B43A3C Arachis hypogaea HOM05D003837 ORTHO05D004751 7.7e-35 151.8 129 62.0
FvH4_7g14571 Fragaria vesca HOM05D003837 ORTHO05D004751 1.7e-34 150.6 88 79.5
MD09G1245400 Malus domestica HOM05D003837 ORTHO05D004751 1.9e-33 147.1 82 84.1
Glyma.04G165300 Glycine max HOM05D003837 ORTHO05D004751 2.8e-29 133.3 109 61.5
MD09G1245300 Malus domestica HOM05D003837 ORTHO05D004751 9.2e-28 128.3 76 76.3
arahy.Tifrunner.gnm1.ann1.DBMD67 Arachis hypogaea HOM05D003837 ORTHO05D004751 9.5e-25 118.2 69 79.7
Ciclev10006592m.g Citrus clementina HOM05D003837 ORTHO05D033091 4.9e-21 105.9 67 68.7
RcHm_v2.0_Chr1g0356021 Rosa chinensis HOM05D003837 ORTHO05D004751 1.4e-20 104.4 108 51.9
Actinidia37295 Actinidia chinensis HOM05D003837 ORTHO05D004751 7.0e-20 102.1 68 72.1
A05p05950 Brassica napus HOM05D003837 ORTHO05D033091 2.3e-15 87.0 49 81.6
BraA05t19558Z Brassica rapa HOM05D003837 ORTHO05D033091 2.3e-15 87.0 49 81.6
Ciclev10013186m.g Citrus clementina HOM05D003837 ORTHO05D004751 8.9e-15 85.1 84 51.2
A06p08350 Brassica napus HOM05D003837 ORTHO05D099682 4.9e-13 79.3 65 61.5
AUR62043290 Chenopodium quinoa HOM05D008055 ORTHO05D009927 9.2e-12 75.1 60 60.0
BolC9t54120H Brassica oleracea HOM05D003837 ORTHO05D033622 1.0e-10 71.6 57 64.9
BolC7t40474H Brassica oleracea HOM05D003837 ORTHO05D033622 1.7e-10 70.9 57 63.2
C09p56440 Brassica napus HOM05D003837 ORTHO05D101394 4.0e-07 59.7 51 60.8
Ciclev10003222m.g Citrus clementina HOM05D003684 ORTHO05D004428 9.9e-06 55.1 40 60.0


User provided reference genes

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