Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01734 Erythranthe guttata HOM05D005215 ORTHO05D006382 2.9e-125 451.8 213 100.0
Migut.C00229 Erythranthe guttata HOM05D005215 ORTHO05D006382 1.6e-123 446.0 213 98.6
Migut.F00868 Erythranthe guttata HOM05D005215 ORTHO05D006382 7.8e-123 443.7 213 97.7
SalBow3G3150 Salvia bowleyana HOM05D005215 ORTHO05D006382 8.9e-111 403.7 209 89.5
SGA_v2.0_scaffold329G48861 Striga asiatica HOM05D005215 ORTHO05D006382 4.9e-109 397.9 213 86.9
Cc02_g09580 Coffea canephora HOM05D005215 ORTHO05D006382 1.5e-105 386.3 208 85.1
MSTRG.27562 Avicennia marina HOM05D005215 ORTHO05D006382 4.3e-105 384.8 213 82.6
TWI15G0816 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 2.1e-104 382.5 213 81.7
Dinv11822 Davidia involucrata HOM05D005215 ORTHO05D006382 3.6e-104 381.7 213 81.7
Nitab4.5_0009484g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 4.8e-104 381.3 209 83.7
Atru.chr12.1046 Acer truncatum HOM05D005215 ORTHO05D006382 6.2e-104 380.9 211 81.5
AUR62042083 Chenopodium quinoa HOM05D005215 ORTHO05D006382 8.1e-104 380.6 213 81.2
Ciclev10016681m.g Citrus clementina HOM05D005215 ORTHO05D006382 1.1e-103 380.2 213 80.8
Nitab4.5_0002586g0020 Nicotiana tabacum HOM05D005215 ORTHO05D006382 1.8e-103 379.4 209 83.7
Hma1.2p1_0756F.1_g213190 Hydrangea macrophylla HOM05D005215 ORTHO05D006382 3.1e-103 378.6 213 81.2
CAN.G1417.3 Capsicum annuum HOM05D005215 ORTHO05D006382 5.3e-103 377.9 209 82.8
ClCG08G008310 Citrullus lanatus HOM05D005215 ORTHO05D006382 5.3e-103 377.9 208 83.7
PGR044G2198 Punica granatum HOM05D005215 ORTHO05D006382 1.2e-102 376.7 209 81.3
Solyc11g006770.3 Solanum lycopersicum HOM05D005215 ORTHO05D006382 1.2e-102 376.7 209 83.3
PGSC0003DMG400023967 Solanum tuberosum HOM05D005215 ORTHO05D006382 1.2e-102 376.7 209 83.3
Peaxi162Scf00125g00233 Petunia axillaris HOM05D005215 ORTHO05D006382 1.5e-102 376.3 209 83.7
Lsat_1_v5_gn_2_104201 Lactuca sativa HOM05D005215 ORTHO05D006382 2.0e-102 375.9 208 82.7
Psat0s1904g0160 Pisum sativum HOM05D005215 ORTHO05D006382 3.4e-102 375.2 208 82.2
CiPaw.13G040900 Carya illinoinensis HOM05D005215 ORTHO05D006382 4.4e-102 374.8 213 82.6
arahy.Tifrunner.gnm1.ann1.E5H8ET Arachis hypogaea HOM05D005215 ORTHO05D006382 5.8e-102 374.4 211 82.5
Sed0008445 Sechium edule HOM05D005215 ORTHO05D006382 5.8e-102 374.4 208 83.2
Sopen11g002700 Solanum pennellii HOM05D005215 ORTHO05D006382 7.6e-102 374.0 208 83.2
Actinidia34727 Actinidia chinensis HOM05D005215 ORTHO05D006382 9.9e-102 373.6 213 80.8
vmacro07260 Vaccinium macrocarpon HOM05D005215 ORTHO05D006382 9.9e-102 373.6 214 81.8
EL10Ac4g07754 Beta vulgaris HOM05D005215 ORTHO05D006382 1.3e-101 373.2 211 79.6
Thecc.10G114600 Theobroma cacao HOM05D005215 ORTHO05D006382 1.7e-101 372.9 213 81.7
Manes.18G138580 Manihot esculenta HOM05D005215 ORTHO05D006382 2.2e-101 372.5 213 80.3
MBI01_g04055_MAGBIO Magnolia biondii HOM05D005215 ORTHO05D006382 3.8e-101 371.7 211 79.1
Potri.010G240000 Populus trichocarpa HOM05D005215 ORTHO05D006382 3.8e-101 371.7 213 81.2
Nn6g34863 Nelumbo nucifera HOM05D005215 ORTHO05D006382 6.4e-101 370.9 208 81.2
CSS0033765 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 8.4e-101 370.5 213 80.8
QL04p046761 Quercus lobata HOM05D005215 ORTHO05D006382 8.4e-101 370.5 212 78.8
Aqoxy4G02757 Aquilegia oxysepala HOM05D005215 ORTHO05D006382 1.4e-100 369.8 209 80.9
Hund06789 Selenicereus undatus HOM05D005215 ORTHO05D006382 1.4e-100 369.8 213 79.3
TPR.G2443 Trifolium pratense HOM05D005215 ORTHO05D006382 1.9e-100 369.4 208 80.8
Lj5g0024589 Lotus japonicus HOM05D005215 ORTHO05D006382 3.2e-100 368.6 211 81.0
TWI63G0161 Tripterygium wilfordii HOM05D005215 ORTHO05D006382 3.2e-100 368.6 213 78.4
Medtr1g111860 Medicago truncatula HOM05D005215 ORTHO05D006382 5.4e-100 367.9 208 80.8
Gohir.D05G288400 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.6e-99 366.3 213 81.2
Gorai.009G303500 Gossypium raimondii HOM05D005215 ORTHO05D006382 1.6e-99 366.3 213 81.2
TAR623G0377 Trochodendron aralioides HOM05D005215 ORTHO05D006382 2.7e-99 365.5 213 77.9
TAR369G1081 Trochodendron aralioides HOM05D005215 ORTHO05D006382 3.5e-99 365.2 213 77.5
CiPaw.14G033600 Carya illinoinensis HOM05D005215 ORTHO05D006382 4.6e-99 364.8 213 80.3
Eucgr.J00268 Eucalyptus grandis HOM05D005215 ORTHO05D006382 4.6e-99 364.8 213 79.3
CDE06G1220 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 6.0e-99 364.4 209 78.5
HanXRQChr07g0194041 Helianthus annuus HOM05D005215 ORTHO05D006382 6.0e-99 364.4 208 79.8
HanXRQChr11g0321671 Helianthus annuus HOM05D005215 ORTHO05D006382 7.9e-99 364.0 208 80.8
GSVIVG01010684001 Vitis vinifera HOM05D005215 ORTHO05D006382 7.9e-99 364.0 204 81.4
arahy.Tifrunner.gnm1.ann1.KL5LPC Arachis hypogaea HOM05D005215 ORTHO05D006382 1.0e-98 363.6 234 74.8
CSS0044679 Camellia sinensis var. sinensis HOM05D005215 ORTHO05D006382 1.0e-98 363.6 213 79.3
Gohir.A05G287300 Gossypium hirsutum HOM05D005215 ORTHO05D006382 1.0e-98 363.6 213 80.8
CDE08G0922 Ceratophyllum demersum HOM05D005215 ORTHO05D006382 1.3e-98 363.2 209 78.0
Duzib114G0243 Durio zibethinus HOM05D005215 ORTHO05D006382 2.3e-98 362.5 213 78.9
Lsat_1_v5_gn_0_8140 Lactuca sativa HOM05D005215 ORTHO05D006382 3.0e-98 362.1 208 80.8
Sc06g0002380 Simmondsia chinensis HOM05D005215 ORTHO05D006382 5.1e-98 361.3 209 79.4
Sed0014754 Sechium edule HOM05D005215 ORTHO05D006382 1.1e-97 360.1 208 79.3
Potri.008G019200 Populus trichocarpa HOM05D005215 ORTHO05D006382 2.5e-97 359.0 213 77.9
HPP92_020962 Vanilla planifolia HOM05D005215 ORTHO05D006382 2.5e-97 359.0 210 76.2
Sabra08G0012600 Salix brachista HOM05D005215 ORTHO05D006382 3.3e-97 358.6 213 78.9
THA.LOC104801304 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 3.3e-97 358.6 213 77.5
ECA232G3141 Erigeron canadensis HOM05D005215 ORTHO05D006382 5.6e-97 357.8 208 79.8
DCAR_006336 Daucus carota HOM05D005215 ORTHO05D006382 7.3e-97 357.5 204 80.4
Actinidia18624 Actinidia chinensis HOM05D005215 ORTHO05D006382 9.6e-97 357.1 198 81.8
CANSAT56G3442 Cannabis sativa HOM05D005215 ORTHO05D006382 3.6e-96 355.1 213 77.0
Oeu030225.2 Olea europaea HOM05D005215 ORTHO05D006382 1.8e-95 352.8 217 78.3
Os10g0573100 Oryza sativa ssp. japonica HOM05D005215 ORTHO05D006382 1.8e-95 352.8 211 77.3
Prupe.2G069900 Prunus persica HOM05D005215 ORTHO05D006382 1.8e-95 352.8 213 76.5
THA.LOC104811337 Tarenaya hassleriana HOM05D005215 ORTHO05D006382 1.8e-95 352.8 210 75.7
Cpa.g.sc704.2 Carica papaya HOM05D005215 ORTHO05D006382 2.4e-95 352.4 193 82.9
AUR62041518 Chenopodium quinoa HOM05D005215 ORTHO05D006382 2.4e-95 352.4 233 71.2
RcHm_v2.0_Chr7g0197741 Rosa chinensis HOM05D005215 ORTHO05D006382 2.4e-95 352.4 211 78.2
AL4G36010 Arabidopsis lyrata HOM05D005215 ORTHO05D006382 4.0e-95 351.7 212 74.5
Glyma.20G074500 Glycine max HOM05D005215 ORTHO05D006382 6.9e-95 350.9 213 77.5
Aa31LG5G21000 Aethionema arabicum HOM05D005215 ORTHO05D006382 2.6e-94 349.0 211 74.4
CARHR133400 Cardamine hirsuta HOM05D005215 ORTHO05D006382 3.4e-94 348.6 207 77.3
PSO339G4522 Papaver somniferum HOM05D005215 ORTHO05D006382 3.4e-94 348.6 211 75.4
AT2G38710 Arabidopsis thaliana HOM05D005215 ORTHO05D006382 5.8e-94 347.8 207 76.3
MD02G1262000 Malus domestica HOM05D005215 ORTHO05D006382 7.6e-94 347.4 208 75.0
Sp4g21070 Schrenkiella parvula HOM05D005215 ORTHO05D006382 9.9e-94 347.1 206 75.7
Carub.0004s2071 Capsella rubella HOM05D005215 ORTHO05D006382 1.3e-93 346.7 206 75.7
Glyma.10G123100 Glycine max HOM05D005215 ORTHO05D006382 1.3e-93 346.7 213 76.5
PSO384G1677 Papaver somniferum HOM05D005215 ORTHO05D006382 1.3e-93 346.7 208 76.4
Phvul.007G235600 Phaseolus vulgaris HOM05D005215 ORTHO05D006382 1.3e-93 346.7 211 75.8
BcaC02g07452 Brassica carinata HOM05D005215 ORTHO05D006382 2.2e-93 345.9 210 74.8
C03p25540 Brassica napus HOM05D005215 ORTHO05D006382 2.2e-93 345.9 208 76.4
FvH4_5g02370 Fragaria vesca HOM05D005215 ORTHO05D006382 2.2e-93 345.9 211 76.8
FAN13G0513 Fragaria x ananassa HOM05D005215 ORTHO05D006382 2.2e-93 345.9 200 79.5
ATR0776G030 Amborella trichopoda HOM05D005215 ORTHO05D006382 4.9e-93 344.7 208 76.9
BraA03t11391Z Brassica rapa HOM05D005215 ORTHO05D006382 6.4e-93 344.4 208 76.4
Thhalv10017213m.g Eutrema salsugineum HOM05D005215 ORTHO05D006382 6.4e-93 344.4 206 75.2
FAN18G1091 Fragaria x ananassa HOM05D005215 ORTHO05D006382 6.4e-93 344.4 211 76.3
VMungo0720G2906 Vigna mungo HOM05D005215 ORTHO05D006382 6.4e-93 344.4 209 75.6
BolC3t14941H Brassica oleracea HOM05D005215 ORTHO05D006382 8.4e-93 344.0 208 76.0
BraA04t18418Z Brassica rapa HOM05D005215 ORTHO05D006382 2.4e-92 342.4 210 73.8
C04p66830 Brassica napus HOM05D005215 ORTHO05D006382 3.2e-92 342.0 210 73.8
BolC4t28184H Brassica oleracea HOM05D005215 ORTHO05D006382 4.2e-92 341.7 210 73.8
Zm00001eb390460 Zea mays HOM05D005215 ORTHO05D006382 4.2e-92 341.7 209 74.6
FAN04G2904 Fragaria x ananassa HOM05D005215 ORTHO05D006382 7.1e-92 340.9 200 78.5
SEGI_01358 Sequoiadendron giganteum HOM05D005215 ORTHO05D006382 7.1e-92 340.9 208 76.0
MD07G1058400 Malus domestica HOM05D005215 ORTHO05D006382 1.2e-91 340.1 207 74.4
A03p21550 Brassica napus HOM05D005215 ORTHO05D006382 1.6e-91 339.7 208 75.0
Oeu026607.3 Olea europaea HOM05D005215 ORTHO05D006382 2.3e-90 335.9 295 58.3
Pp3c3_21710 Physcomitrium patens HOM05D005215 ORTHO05D006382 7.4e-89 330.9 202 74.3
Mapoly0059s0056 Marchantia polymorpha HOM05D005215 ORTHO05D006382 2.1e-88 329.3 205 71.7
SMO331G0011 Selaginella moellendorffii HOM05D005215 ORTHO05D006382 2.1e-88 329.3 204 72.1
AagrBONN_evm.TU.Sc2ySwM_117.3510 Anthoceros agrestis HOM05D005215 ORTHO05D006382 1.4e-87 326.6 201 72.1
Haze_03299 Corylus avellana HOM05D005215 ORTHO05D006382 1.8e-87 326.2 253 65.2
Lj3A925G70 Lonicera japonica HOM05D005215 ORTHO05D006382 2.6e-86 322.4 178 85.4
PSO339G6572 Papaver somniferum HOM05D005215 ORTHO05D006382 5.8e-86 321.2 209 69.9
Ah.11g047220 Amaranthus hybridus HOM05D005215 ORTHO05D006382 1.0e-85 320.5 212 71.2
PSO801G0072 Papaver somniferum HOM05D005215 ORTHO05D006382 6.5e-85 317.8 209 68.9
Dinv10934 Davidia involucrata HOM05D005215 ORTHO05D006382 1.8e-82 309.7 166 83.7
FAN08G2650 Fragaria x ananassa HOM05D005215 ORTHO05D006382 9.6e-81 303.9 201 71.6
MELO3C019899.2 Cucumis melo HOM05D005215 ORTHO05D006382 1.6e-80 303.1 173 82.1
COL.COLO4_05151 Corchorus olitorius HOM05D005215 ORTHO05D006382 4.1e-71 271.9 427 40.0
Lalb_Chr06g0166341 Lupinus albus HOM05D005215 ORTHO05D006382 2.2e-69 266.2 145 81.4
Lalb_Chr02g0146211 Lupinus albus HOM05D005215 ORTHO05D006382 8.5e-69 264.2 145 80.0
Nn2g14190 Nelumbo nucifera HOM05D005215 ORTHO05D006382 8.8e-66 254.2 208 60.6
A04p29510 Brassica napus HOM05D005215 ORTHO05D006382 5.7e-65 251.5 145 75.9
Pp3c4_19060 Physcomitrium patens HOM05D005215 ORTHO05D006382 1.7e-64 250.0 171 69.0
CsaV3_6G004280 Cucumis sativus L. HOM05D005215 ORTHO05D006382 2.6e-54 216.1 113 85.0
CBR_g39962 Chara braunii HOM05D005215 ORTHO05D006382 1.0e-53 214.2 140 70.7
Cre03.g146687 Chlamydomonas reinhardtii HOM05D005215 ORTHO05D006382 2.0e-49 199.9 189 50.3
Haze_26289 Corylus avellana HOM05D005215 ORTHO05D006382 2.2e-48 196.4 196 50.5
Ca_25655_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 2.0e-46 189.9 125 69.6
Potri.008G019325 Populus trichocarpa HOM05D005215 ORTHO05D006382 3.2e-44 182.6 109 78.9
MCO01G395 Micromonas commoda HOM05D005215 ORTHO05D006382 2.8e-40 169.5 195 44.6
unitig_88.g27810 Utricularia gibba HOM05D005215 ORTHO05D006382 6.3e-40 168.3 88 83.0
PRCOL_00005793 Prasinoderma coloniale HOM05D005215 ORTHO05D006382 5.4e-39 165.2 219 44.7
Sc06g0000010 Simmondsia chinensis HOM05D005215 ORTHO05D006382 5.5e-36 155.2 97 75.3
Dinv02216 Davidia involucrata HOM05D005215 ORTHO05D006382 1.2e-33 147.5 74 85.1
BcaNung04832 Brassica carinata HOM05D005215 ORTHO05D006382 3.7e-32 142.5 100 68.0
Cfa010328 Carpinus fangiana HOM05D005215 ORTHO05D006382 7.0e-31 138.3 79 82.3
unitig_88.g27811 Utricularia gibba HOM05D005215 ORTHO05D006382 4.9e-24 115.5 69 79.7
Sabra16G0322800 Salix brachista HOM05D005215 ORTHO05D006382 8.0e-19 98.2 72 68.1
Lalb_Chr06g0166351 Lupinus albus HOM05D005215 ORTHO05D006382 1.0e-18 97.8 74 63.5
Lalb_Chr02g0146221 Lupinus albus HOM05D005215 ORTHO05D006382 1.5e-17 94.0 66 69.7
Actinidia27053 Actinidia chinensis HOM05D005215 ORTHO05D006382 2.6e-17 93.2 60 75.0
Migut.F00867 Erythranthe guttata HOM05D012249 ORTHO05D014194 2.3e-10 70.1 35 85.7
Peaxi162Scf00959g00416 Petunia axillaris HOM05D005215 ORTHO05D006382 1.5e-09 67.4 40 77.5
Peaxi162Scf00959g00417 Petunia axillaris HOM05D005215 ORTHO05D306904 7.5e-09 65.1 60 63.3
GSVIVG01037606001 Vitis vinifera HOM05D005215 ORTHO05D014194 1.7e-08 63.9 35 74.3
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.9e-08 63.2 32 87.5


User provided reference genes

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