Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01717 Erythranthe guttata HOM05D005825 ORTHO05D006483 7.1e-184 647.1 326 100.0
MSTRG.19597 Avicennia marina HOM05D005825 ORTHO05D006483 2.8e-148 528.9 326 81.6
Oeu007499.1 Olea europaea HOM05D005825 ORTHO05D006483 5.7e-141 504.6 332 76.8
SalBow3G4290 Salvia bowleyana HOM05D005825 ORTHO05D006483 4.5e-138 495.0 327 76.5
Peaxi162Scf00157g01524 Petunia axillaris HOM05D005825 ORTHO05D006483 8.0e-135 484.2 333 74.5
Sopen12g004430 Solanum pennellii HOM05D005825 ORTHO05D006483 1.0e-134 483.8 329 74.8
SGA_v2.0_scaffold299G47720 Striga asiatica HOM05D005825 ORTHO05D006483 1.0e-134 483.8 327 74.9
Solyc12g009430.2 Solanum lycopersicum HOM05D005825 ORTHO05D006483 1.4e-134 483.4 329 74.8
CAN.G1591.11 Capsicum annuum HOM05D005825 ORTHO05D006483 9.7e-133 477.2 326 74.2
vmacro20556 Vaccinium macrocarpon HOM05D005825 ORTHO05D006483 1.1e-131 473.8 327 73.4
PGSC0003DMG400002918 Solanum tuberosum HOM05D005825 ORTHO05D006483 1.7e-129 466.5 323 74.0
DCAR_009187 Daucus carota HOM05D005825 ORTHO05D006483 2.2e-129 466.1 327 72.5
Dinv36528 Davidia involucrata HOM05D005825 ORTHO05D006483 2.7e-127 459.1 326 70.9
unitig_748.g8100 Utricularia gibba HOM05D005825 ORTHO05D006483 1.4e-126 456.8 324 71.6
Lj2C942T8 Lonicera japonica HOM05D005825 ORTHO05D006483 2.3e-126 456.1 352 67.3
Nitab4.5_0014105g0010 Nicotiana tabacum HOM05D005825 ORTHO05D006483 5.2e-126 454.9 321 73.5
Nitab4.5_0002658g0050 Nicotiana tabacum HOM05D005825 ORTHO05D006483 6.8e-126 454.5 328 72.6
Thecc.09G126400 Theobroma cacao HOM05D005825 ORTHO05D006483 6.8e-126 454.5 326 71.8
arahy.Tifrunner.gnm1.ann1.1NB5KJ Arachis hypogaea HOM05D005825 ORTHO05D006483 8.8e-126 454.1 328 68.0
Rhsim01G0070600 Rhododendron simsii HOM05D005825 ORTHO05D006483 1.2e-125 453.8 326 70.9
Hund09127 Selenicereus undatus HOM05D005825 ORTHO05D006483 1.2e-125 453.8 323 70.9
Cpa.g.sc75.29 Carica papaya HOM05D005825 ORTHO05D006483 2.6e-125 452.6 325 71.4
Lalb_Chr13g0301881 Lupinus albus HOM05D005825 ORTHO05D006483 5.7e-125 451.4 328 70.1
arahy.Tifrunner.gnm1.ann1.9UEQ51 Arachis hypogaea HOM05D005825 ORTHO05D006483 7.5e-125 451.1 325 67.7
Duzib168G1077 Durio zibethinus HOM05D005825 ORTHO05D006483 1.7e-124 449.9 328 71.0
Phvul.003G164300 Phaseolus vulgaris HOM05D005825 ORTHO05D006483 4.8e-124 448.4 326 68.7
Gorai.010G064100 Gossypium raimondii HOM05D005825 ORTHO05D006483 8.3e-124 447.6 326 70.9
EL10Ac8g18654 Beta vulgaris HOM05D005825 ORTHO05D006483 1.1e-123 447.2 326 68.7
Glyma.13G167400 Glycine max HOM05D005825 ORTHO05D006483 3.1e-123 445.7 326 68.4
Gohir.D06G054601 Gossypium hirsutum HOM05D005825 ORTHO05D006483 3.1e-123 445.7 326 70.6
Actinidia40470 Actinidia chinensis HOM05D005825 ORTHO05D006483 4.1e-123 445.3 324 69.8
CSS0017066 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 4.1e-123 445.3 324 69.8
Gohir.A06G056101 Gossypium hirsutum HOM05D005825 ORTHO05D006483 9.1e-123 444.1 326 70.6
Ca_21683_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.2e-122 443.7 326 68.7
CSS0027185 Camellia sinensis var. sinensis HOM05D005825 ORTHO05D006483 1.6e-122 443.4 324 69.8
Sed0008025 Sechium edule HOM05D005825 ORTHO05D006483 2.0e-122 443.0 327 67.3
Lj2A929T15 Lonicera japonica HOM05D005825 ORTHO05D006483 2.7e-122 442.6 352 65.9
CANSAT11G1244 Cannabis sativa HOM05D005825 ORTHO05D006483 3.5e-122 442.2 327 69.7
Carub.0004s0696 Capsella rubella HOM05D005825 ORTHO05D006483 4.5e-122 441.8 323 70.3
Lalb_Chr12g0197941 Lupinus albus HOM05D005825 ORTHO05D006483 4.5e-122 441.8 327 69.7
THA.LOC104815280 Tarenaya hassleriana HOM05D005825 ORTHO05D006483 5.9e-122 441.4 326 68.1
Rhsim01G0071200 Rhododendron simsii HOM05D005825 ORTHO05D006483 7.7e-122 441.0 331 68.0
TWI34G0282 Tripterygium wilfordii HOM05D005825 ORTHO05D006483 1.3e-121 440.3 330 69.4
AL4G19680 Arabidopsis lyrata HOM05D005825 ORTHO05D006483 2.9e-121 439.1 327 68.2
Lsat_1_v5_gn_8_58680 Lactuca sativa HOM05D005825 ORTHO05D006483 2.9e-121 439.1 325 68.9
VMungo1215G3451 Vigna mungo HOM05D005825 ORTHO05D006483 2.9e-121 439.1 326 67.5
DCAR_017816 Daucus carota HOM05D005825 ORTHO05D006483 3.8e-121 438.7 362 63.0
AT2G26680 Arabidopsis thaliana HOM05D005825 ORTHO05D006483 1.1e-120 437.2 327 68.2
PGR142G1018 Punica granatum HOM05D005825 ORTHO05D006483 1.1e-120 437.2 331 68.9
Sp4g09150 Schrenkiella parvula HOM05D005825 ORTHO05D006483 1.5e-120 436.8 323 67.8
TAR625G0074 Trochodendron aralioides HOM05D005825 ORTHO05D006483 1.9e-120 436.4 323 67.8
Ah.09g226210 Amaranthus hybridus HOM05D005825 ORTHO05D006483 2.5e-120 436.0 324 68.5
MELO3C004508.2 Cucumis melo HOM05D005825 ORTHO05D006483 2.5e-120 436.0 325 67.7
Thhalv10002044m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 5.5e-120 434.9 323 67.8
Lj4g0013357 Lotus japonicus HOM05D005825 ORTHO05D006483 1.6e-119 433.3 326 68.1
Medtr4g114160 Medicago truncatula HOM05D005825 ORTHO05D006483 1.6e-119 433.3 326 67.2
Sabra02G0094300 Salix brachista HOM05D005825 ORTHO05D006483 1.6e-119 433.3 325 70.5
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 2.1e-119 433.0 323 67.2
MD02G1032800 Malus domestica HOM05D005825 ORTHO05D006483 2.1e-119 433.0 325 68.0
arahy.Tifrunner.gnm1.ann1.85XGXJ Arachis hypogaea HOM05D005825 ORTHO05D006483 2.8e-119 432.6 325 65.8
Cfa003372 Carpinus fangiana HOM05D005825 ORTHO05D006483 2.8e-119 432.6 328 67.4
HanXRQChr17g0537731 Helianthus annuus HOM05D005825 ORTHO05D006483 2.8e-119 432.6 323 69.3
Psat4g040200 Pisum sativum HOM05D005825 ORTHO05D006483 2.8e-119 432.6 326 67.2
Prupe.7G242700 Prunus persica HOM05D005825 ORTHO05D006483 4.7e-119 431.8 324 67.6
ClCG11G003030 Citrullus lanatus HOM05D005825 ORTHO05D006483 8.0e-119 431.0 327 66.4
FAN28G2006 Fragaria x ananassa HOM05D005825 ORTHO05D006483 1.4e-118 430.3 325 67.7
Potri.014G017900 Populus trichocarpa HOM05D005825 ORTHO05D006483 1.4e-118 430.3 325 70.5
CsaV3_2G002850 Cucumis sativus L. HOM05D005825 ORTHO05D006483 1.8e-118 429.9 327 66.7
FAN19G0135 Fragaria x ananassa HOM05D005825 ORTHO05D006483 2.3e-118 429.5 325 68.3
Eucgr.C01173 Eucalyptus grandis HOM05D005825 ORTHO05D006483 3.0e-118 429.1 329 66.9
BcaB06g28186 Brassica carinata HOM05D005825 ORTHO05D006483 4.0e-118 428.7 323 67.2
FvH4_1g03280 Fragaria vesca HOM05D005825 ORTHO05D006483 4.0e-118 428.7 325 68.0
FAN23G1198 Fragaria x ananassa HOM05D005825 ORTHO05D006483 5.2e-118 428.3 327 68.2
AUR62013360 Chenopodium quinoa HOM05D005825 ORTHO05D006483 6.8e-118 427.9 284 73.9
Hma1.2p1_0018F.1_g012420 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 6.8e-118 427.9 326 66.6
Manes.06G058801 Manihot esculenta HOM05D005825 ORTHO05D006483 6.8e-118 427.9 328 68.0
Ciclev10008932m.g Citrus clementina HOM05D005825 ORTHO05D006483 8.8e-118 427.6 324 67.0
Sabra14G0011800 Salix brachista HOM05D005825 ORTHO05D006483 8.8e-118 427.6 324 70.4
Atru.chr7.1162 Acer truncatum HOM05D005825 ORTHO05D006483 1.2e-117 427.2 325 67.7
arahy.Tifrunner.gnm1.ann1.R6UVTB Arachis hypogaea HOM05D005825 ORTHO05D006483 1.5e-117 426.8 325 64.9
Hma1.2p1_2368F.1_g320700 Hydrangea macrophylla HOM05D005825 ORTHO05D006483 1.5e-117 426.8 326 66.3
RcHm_v2.0_Chr2g0088431 Rosa chinensis HOM05D005825 ORTHO05D006483 1.5e-117 426.8 329 67.2
A04p21320 Brassica napus HOM05D005825 ORTHO05D006483 3.4e-117 425.6 325 67.1
BraA04t17698Z Brassica rapa HOM05D005825 ORTHO05D006483 3.4e-117 425.6 325 67.1
FAN26G2420 Fragaria x ananassa HOM05D005825 ORTHO05D006483 4.4e-117 425.2 327 67.9
PSO675G5818 Papaver somniferum HOM05D005825 ORTHO05D006483 2.8e-116 422.5 325 65.8
Nn2g12789 Nelumbo nucifera HOM05D005825 ORTHO05D006483 4.9e-116 421.8 332 66.0
Sc08g0006620 Simmondsia chinensis HOM05D005825 ORTHO05D006483 1.1e-115 420.6 328 65.5
HanXRQChr17g0537711 Helianthus annuus HOM05D005825 ORTHO05D006483 1.8e-115 419.9 323 67.2
CiPaw.03G244100 Carya illinoinensis HOM05D005825 ORTHO05D006483 2.4e-115 419.5 327 65.4
Aqoxy5G01398 Aquilegia oxysepala HOM05D005825 ORTHO05D006483 3.1e-115 419.1 323 67.2
PSO782G3266 Papaver somniferum HOM05D005825 ORTHO05D006483 4.1e-115 418.7 325 65.8
MBI16_g24711_MAGBIO Magnolia biondii HOM05D005825 ORTHO05D006483 7.0e-115 417.9 323 65.3
C04p57230 Brassica napus HOM05D005825 ORTHO05D006483 9.2e-115 417.5 324 64.8
BolC4t27250H Brassica oleracea HOM05D005825 ORTHO05D006483 2.7e-114 416.0 324 64.8
BcaC02g08209 Brassica carinata HOM05D005825 ORTHO05D006483 8.6e-113 411.0 326 65.3
Thhalv10023596m.g Eutrema salsugineum HOM05D005825 ORTHO05D006483 1.1e-112 410.6 323 65.6
CDE04G1080 Ceratophyllum demersum HOM05D005825 ORTHO05D006483 8.0e-111 404.4 324 64.5
HPP92_017605 Vanilla planifolia HOM05D005825 ORTHO05D006483 1.2e-109 400.6 329 64.1
HanXRQChr06g0180341 Helianthus annuus HOM05D005825 ORTHO05D006483 2.2e-108 396.4 291 69.8
Os03g0566600 Oryza sativa ssp. japonica HOM05D005825 ORTHO05D006483 2.1e-103 379.8 280 65.7
SHI03392 Sapria himalayana HOM05D005825 ORTHO05D006483 1.8e-102 376.7 383 53.0
ATR0225G021 Amborella trichopoda HOM05D005825 ORTHO05D006483 3.4e-101 372.5 263 70.0
AUR62011128 Chenopodium quinoa HOM05D005825 ORTHO05D006483 9.8e-101 370.9 324 60.8
Haze_25579 Corylus avellana HOM05D005825 ORTHO05D006483 1.7e-100 370.2 329 60.2
QL10p023454 Quercus lobata HOM05D005825 ORTHO05D006483 1.7e-100 370.2 502 44.0
Zm00001eb043030 Zea mays HOM05D005825 ORTHO05D006483 1.7e-100 370.2 267 67.4
Potri.002G119800 Populus trichocarpa HOM05D005825 ORTHO05D006483 1.2e-82 310.8 190 82.6
TPR.G10697 Trifolium pratense HOM05D005825 ORTHO05D006483 3.0e-81 306.2 185 82.7
AagrBONN_evm.TU.Sc2ySwM_344.1792 Anthoceros agrestis HOM05D005825 ORTHO05D006483 8.7e-81 304.7 267 55.1
ECA246G2031 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-80 303.5 199 75.4
SMO147G0115 Selaginella moellendorffii HOM05D005825 ORTHO05D006483 4.3e-80 302.4 262 56.1
CiPaw.04G171000 Carya illinoinensis HOM05D005825 ORTHO05D006483 6.4e-76 288.5 178 79.2
Glyma.17G115000 Glycine max HOM05D005825 ORTHO05D006483 1.4e-75 287.3 178 80.3
Cc06_g08520 Coffea canephora HOM05D005825 ORTHO05D006483 1.9e-75 287.0 170 82.9
GSVIVG01015529001 Vitis vinifera HOM05D005825 ORTHO05D006483 7.8e-74 281.6 167 83.8
CARHR118580 Cardamine hirsuta HOM05D005825 ORTHO05D006483 3.3e-64 249.6 207 62.8
Ca_13270_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 5.5e-51 205.7 186 55.9
Actinidia21988 Actinidia chinensis HOM05D005825 ORTHO05D006483 2.7e-50 203.4 122 82.0
VMungo0647G0470 Vigna mungo HOM05D005825 ORTHO05D006483 4.8e-47 192.6 136 63.2
Ca_14592_v3 Cicer arietinum L. HOM05D005825 ORTHO05D006483 1.1e-46 191.4 216 49.5
CARHR118590 Cardamine hirsuta HOM05D005825 ORTHO05D006483 9.0e-46 188.3 119 75.6
Eucgr.G00617 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.1e-43 181.4 121 75.2
Eucgr.B02426 Eucalyptus grandis HOM05D005825 ORTHO05D006483 2.1e-42 177.2 121 73.6
Eucgr.C03225 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.4e-38 164.5 115 70.4
Eucgr.E01840 Eucalyptus grandis HOM05D005825 ORTHO05D006483 1.4e-33 147.9 121 66.1
Eucgr.B02447 Eucalyptus grandis HOM05D005825 ORTHO05D006483 8.8e-33 145.2 95 77.9
TAR381G0761 Trochodendron aralioides HOM05D005825 ORTHO05D006483 2.6e-32 143.7 152 48.7
CAN.G204.2 Capsicum annuum HOM05D005825 ORTHO05D006483 2.4e-22 110.5 73 74.0
SalBow6G2945 Salvia bowleyana HOM05D000060 ORTHO05D000082 3.8e-20 103.2 127 49.6
MCO17G084 Micromonas commoda HOM05D051517 ORTHO05D006483 1.8e-14 84.3 186 30.6
Zm00001eb219900 Zea mays HOM05D005825 ORTHO05D006483 5.0e-12 76.3 164 36.0
Cre02.g103000 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 3.6e-10 70.1 144 34.0
VMungo0464G1687 Vigna mungo HOM05D005825 ORTHO05D006483 6.1e-10 69.3 55 60.0
Cre12.g488550 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 1.0e-09 68.6 148 32.4
MCO17G075 Micromonas commoda HOM05D051517 ORTHO05D006483 1.0e-09 68.6 188 28.2
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 8.3e-07 58.9 52 61.5
Cre09.g386756 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 1.1e-06 58.5 178 28.1
Cre09.g386747 Chlamydomonas reinhardtii HOM05D005825 ORTHO05D006483 1.4e-06 58.2 181 28.7
Cre12.g552600 Chlamydomonas reinhardtii HOM05D024924 ORTHO05D006483 5.4e-06 56.2 143 30.1
PRCOL_00003044 Prasinoderma coloniale HOM05D024924 ORTHO05D006483 5.4e-06 56.2 143 29.4


User provided reference genes

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