Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 5.0e-91 337.8 176 100.0
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 3.1e-40 169.1 176 58.5
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 3.4e-39 165.6 179 57.5
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 1.7e-38 163.3 191 56.0
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 2.3e-35 152.9 180 55.0
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 3.0e-35 152.5 176 54.0
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 8.6e-35 151.0 168 54.2
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.1e-34 150.6 170 53.5
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 1.1e-34 150.6 170 52.9
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.9e-34 149.8 173 53.2
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 4.3e-34 148.7 168 51.2
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 9.5e-34 147.5 180 50.6
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 1.8e-32 143.3 169 52.7
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 3.1e-32 142.5 174 50.0
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 4.0e-32 142.1 170 51.2
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 6.8e-32 141.4 171 50.3
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 8.9e-32 141.0 169 52.1
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.2e-31 140.6 165 49.7
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 4.4e-31 138.7 190 48.9
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 1.7e-30 136.7 186 50.0
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 3.8e-30 135.6 173 48.6
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 1.9e-29 133.3 168 49.4
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 3.2e-29 132.5 167 49.7
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 1.2e-28 130.6 186 47.8
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.6e-28 130.2 165 52.7
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 6.0e-28 128.3 165 51.5
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 1.0e-27 127.5 167 48.5
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 5.1e-27 125.2 163 50.3
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 5.1e-27 125.2 167 51.5
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 8.7e-27 124.4 169 45.0
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 8.7e-27 124.4 171 47.4
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 1.1e-26 124.0 172 46.5
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.5e-26 123.6 163 50.3
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.5e-26 123.6 163 50.3
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 1.5e-26 123.6 179 43.6
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 1.9e-26 123.2 166 44.6
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 1.9e-26 123.2 163 49.1
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 2.5e-26 122.9 175 47.4
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 3.3e-26 122.5 170 47.6
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 7.3e-26 121.3 163 49.7
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 1.6e-25 120.2 172 47.7
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 4.7e-25 118.6 169 47.3
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 6.2e-25 118.2 163 49.1
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 8.1e-25 117.9 168 47.6
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 8.1e-25 117.9 166 43.4
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 1.1e-24 117.5 165 43.6
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.8e-24 116.7 163 47.9
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 1.8e-24 116.7 177 46.9
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 3.1e-24 115.9 171 46.8
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 3.1e-24 115.9 171 46.8
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 3.1e-24 115.9 169 44.4
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 4.0e-24 115.5 174 42.5
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 6.9e-24 114.8 185 43.8
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 1.2e-23 114.0 172 43.6
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 1.5e-23 113.6 171 43.3
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 5.8e-23 111.7 173 42.2
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 7.6e-23 111.3 167 44.9
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 1.3e-22 110.5 170 47.6
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 1.3e-22 110.5 182 44.0
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 1.3e-22 110.5 164 46.3
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 1.7e-22 110.2 183 43.7
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 2.9e-22 109.4 176 43.8
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 4.9e-22 108.6 182 43.4
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 6.4e-22 108.2 137 49.6
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 1.4e-21 107.1 164 46.3
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 1.4e-21 107.1 177 44.6
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 1.9e-21 106.7 178 41.6
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 2.4e-21 106.3 183 42.6
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 3.2e-21 105.9 168 39.3
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 5.4e-21 105.1 167 46.1
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 7.8e-20 101.3 169 42.0
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 1.0e-19 100.9 174 40.8
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 2.3e-19 99.8 179 41.9
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 3.0e-19 99.4 170 41.2
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 3.0e-19 99.4 179 43.6
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 1.5e-18 97.1 134 48.5
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 1.9e-18 96.7 160 41.9
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 1.3e-17 94.0 179 41.3
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 3.6e-17 92.4 154 43.5
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.4e-16 90.5 163 41.7
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 1.8e-16 90.1 186 37.6
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 3.1e-16 89.4 173 41.0
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 2.0e-15 86.7 114 44.7
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 7.1e-13 78.2 178 35.4
Dinv32421 Davidia involucrata HOM05D007580 ORTHO05D009620 1.6e-12 77.0 125 44.8
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 2.1e-12 76.6 181 29.8
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 3.5e-12 75.9 165 39.4
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 6.7e-11 71.6 175 34.3
AUR62033366 Chenopodium quinoa HOM05D007580 ORTHO05D009620 1.5e-10 70.5 99 46.5
AUR62026657 Chenopodium quinoa HOM05D007580 ORTHO05D009620 2.8e-09 66.2 151 35.8
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 6.2e-09 65.1 182 35.2
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 3.1e-08 62.8 108 41.7


User provided reference genes

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