Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01640 Erythranthe guttata HOM05D004961 ORTHO05D006258 0.0e+00 1337.8 664 100.0
SalBow5G3969 Salvia bowleyana HOM05D004961 ORTHO05D006258 1.1e-292 1009.6 667 75.6
SalBow5G5559 Salvia bowleyana HOM05D004961 ORTHO05D006258 1.1e-292 1009.6 667 75.6
SGA_v2.0_scaffold11G05589 Striga asiatica HOM05D004961 ORTHO05D006258 9.8e-265 916.8 665 68.6
Migut.N01639 Erythranthe guttata HOM05D004961 ORTHO05D006258 3.5e-262 908.3 666 68.6
Thecc.01G375500 Theobroma cacao HOM05D004961 ORTHO05D006258 1.9e-247 859.4 666 65.5
Gohir.A11G081100 Gossypium hirsutum HOM05D004961 ORTHO05D006258 2.1e-246 855.9 660 65.9
vmacro13395 Vaccinium macrocarpon HOM05D004961 ORTHO05D006258 2.1e-246 855.9 637 67.2
Cc02_g36640 Coffea canephora HOM05D004961 ORTHO05D006258 6.0e-246 854.4 661 66.3
Oeu005782.1 Olea europaea HOM05D004961 ORTHO05D006258 3.0e-245 852.0 659 66.6
Gohir.D11G085600 Gossypium hirsutum HOM05D004961 ORTHO05D006258 5.6e-244 847.8 660 65.6
Gorai.007G091500 Gossypium raimondii HOM05D004961 ORTHO05D006258 5.6e-244 847.8 660 65.8
Rhsim07G0027200 Rhododendron simsii HOM05D004961 ORTHO05D006258 1.5e-241 839.7 631 66.1
CSS0024555 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 2.2e-240 835.9 668 63.5
CANSAT56G2246 Cannabis sativa HOM05D004961 ORTHO05D006258 2.4e-239 832.4 658 63.7
Cfa001712 Carpinus fangiana HOM05D004961 ORTHO05D006258 3.2e-239 832.0 670 63.7
Manes.05G044700 Manihot esculenta HOM05D004961 ORTHO05D006258 9.2e-239 830.5 660 64.2
COL.COLO4_12554 Corchorus olitorius HOM05D004961 ORTHO05D006258 1.6e-238 829.7 661 63.5
Haze_16810 Corylus avellana HOM05D004961 ORTHO05D006258 4.6e-238 828.2 670 63.3
TWI14G0737 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 3.0e-237 825.5 671 63.3
TWI59G0003 Tripterygium wilfordii HOM05D004961 ORTHO05D006258 8.6e-237 823.9 665 62.9
QL08p052244 Quercus lobata HOM05D004961 ORTHO05D006258 2.5e-236 822.4 652 64.7
MD07G1123000 Malus domestica HOM05D004961 ORTHO05D006258 4.3e-236 821.6 667 63.4
Nitab4.5_0000457g0390 Nicotiana tabacum HOM05D004961 ORTHO05D006258 4.3e-236 821.6 681 63.6
Lj9P570T30 Lonicera japonica HOM05D004961 ORTHO05D006258 1.6e-235 819.7 541 73.0
Duzib133G1444 Durio zibethinus HOM05D004961 ORTHO05D006258 2.8e-235 818.9 667 63.1
RcHm_v2.0_Chr1g0350691 Rosa chinensis HOM05D004961 ORTHO05D006258 4.7e-235 818.1 563 69.3
Lalb_Chr13g0291711 Lupinus albus HOM05D004961 ORTHO05D006258 1.1e-234 817.0 624 64.3
CSS0035955 Camellia sinensis var. sinensis HOM05D004961 ORTHO05D006258 3.1e-234 815.5 675 61.6
FAN01G0106 Fragaria x ananassa HOM05D004961 ORTHO05D006258 8.9e-234 813.9 665 61.8
Gorai.004G041000 Gossypium raimondii HOM05D004961 ORTHO05D006258 8.9e-234 813.9 658 63.7
CiPaw.02G167000 Carya illinoinensis HOM05D004961 ORTHO05D006258 1.2e-233 813.5 653 63.4
PGR031G0429 Punica granatum HOM05D004961 ORTHO05D006258 1.5e-233 813.1 580 67.6
Gohir.D08G042400 Gossypium hirsutum HOM05D004961 ORTHO05D006258 2.6e-233 812.4 658 63.5
Sabra14G0049800 Salix brachista HOM05D004961 ORTHO05D006258 3.4e-233 812.0 670 63.0
FvH4_7g11970 Fragaria vesca HOM05D004961 ORTHO05D006258 5.8e-233 811.2 659 62.2
FAN10G1405 Fragaria x ananassa HOM05D004961 ORTHO05D006258 5.8e-233 811.2 659 62.2
Nitab4.5_0005372g0040 Nicotiana tabacum HOM05D004961 ORTHO05D006258 7.6e-233 810.8 681 62.8
Prupe.2G146400 Prunus persica HOM05D004961 ORTHO05D006258 7.6e-233 810.8 668 62.6
Dinv43717 Davidia involucrata HOM05D004961 ORTHO05D006258 9.9e-233 810.4 655 64.3
FAN06G1099 Fragaria x ananassa HOM05D004961 ORTHO05D006258 1.7e-232 809.7 659 62.1
Hma1.2p1_0033F.1_g021010 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 1.7e-232 809.7 671 62.4
Gohir.A08G031300 Gossypium hirsutum HOM05D004961 ORTHO05D006258 2.2e-232 809.3 660 63.0
Potri.014G070200 Populus trichocarpa HOM05D004961 ORTHO05D006258 2.2e-232 809.3 669 63.4
Ca_23848_v3 Cicer arietinum L. HOM05D004961 ORTHO05D006258 2.9e-232 808.9 632 63.0
Hma1.2p1_2294F.1_g319110 Hydrangea macrophylla HOM05D004961 ORTHO05D006258 2.9e-232 808.9 671 62.4
Actinidia12261 Actinidia chinensis HOM05D004961 ORTHO05D006258 4.9e-232 808.1 645 65.3
TAR629G2710 Trochodendron aralioides HOM05D004961 ORTHO05D006258 6.4e-232 807.7 659 62.4
FAN03G2819 Fragaria x ananassa HOM05D004961 ORTHO05D006258 1.1e-231 807.0 667 61.8
CiPaw.01G261500 Carya illinoinensis HOM05D004961 ORTHO05D006258 1.4e-231 806.6 654 62.5
FAN06G1287 Fragaria x ananassa HOM05D004961 ORTHO05D006258 4.2e-231 805.1 665 61.5
FAN10G1351 Fragaria x ananassa HOM05D004961 ORTHO05D006258 4.2e-231 805.1 657 61.9
MD02G1203100 Malus domestica HOM05D004961 ORTHO05D006258 2.3e-229 799.3 662 61.0
Thhalv10005830m.g Eutrema salsugineum HOM05D004961 ORTHO05D006258 3.9e-229 798.5 674 61.9
Oeu037913.2 Olea europaea HOM05D004961 ORTHO05D006258 1.1e-228 797.0 660 63.2
CAN.G388.8 Capsicum annuum HOM05D004961 ORTHO05D006258 2.5e-228 795.8 561 69.9
TPR.G21740 Trifolium pratense HOM05D004961 ORTHO05D006258 2.5e-228 795.8 571 66.7
PGSC0003DMG400012758 Solanum tuberosum HOM05D004961 ORTHO05D006258 4.3e-228 795.0 561 69.9
Atru.chr5.317 Acer truncatum HOM05D004961 ORTHO05D006258 1.6e-227 793.1 569 68.9
Sopen01g037160 Solanum pennellii HOM05D004961 ORTHO05D006258 1.1e-226 790.4 561 69.5
Ciclev10019247m.g Citrus clementina HOM05D004961 ORTHO05D006258 1.4e-226 790.0 641 63.8
Solyc01g091390.2 Solanum lycopersicum HOM05D004961 ORTHO05D006258 1.4e-226 790.0 561 69.7
TAR375G0417 Trochodendron aralioides HOM05D004961 ORTHO05D006258 1.2e-225 786.9 568 67.3
Sp5g02400 Schrenkiella parvula HOM05D004961 ORTHO05D006258 7.6e-225 784.3 670 60.7
MELO3C006184.2 Cucumis melo HOM05D004961 ORTHO05D006258 9.9e-225 783.9 673 58.8
Medtr8g036115 Medicago truncatula HOM05D004961 ORTHO05D006258 1.3e-224 783.5 571 66.4
Sed0003746 Sechium edule HOM05D004961 ORTHO05D006258 1.3e-224 783.5 669 60.2
CsaV3_3G009640 Cucumis sativus L. HOM05D004961 ORTHO05D006258 2.2e-224 782.7 673 58.7
Aa31LG10G15080 Aethionema arabicum HOM05D004961 ORTHO05D006258 7.1e-223 777.7 664 61.3
Aqoxy7G00605 Aquilegia oxysepala HOM05D004961 ORTHO05D006258 7.9e-222 774.2 573 65.8
Nn4g26417 Nelumbo nucifera HOM05D004961 ORTHO05D006258 3.9e-221 771.9 567 66.0
Psat4g195520 Pisum sativum HOM05D004961 ORTHO05D006258 5.1e-221 771.5 550 67.1
Lj3g0023798 Lotus japonicus HOM05D004961 ORTHO05D006258 8.7e-221 770.8 571 66.4
arahy.Tifrunner.gnm1.ann1.T4E2VP Arachis hypogaea HOM05D004961 ORTHO05D006258 1.3e-219 766.9 578 64.7
CARHR171240 Cardamine hirsuta HOM05D004961 ORTHO05D006258 1.3e-219 766.9 673 60.6
THA.LOC104802441 Tarenaya hassleriana HOM05D004961 ORTHO05D006258 3.6e-219 765.4 663 61.5
MBI12_g27776_MAGBIO Magnolia biondii HOM05D004961 ORTHO05D006258 8.1e-219 764.2 635 61.3
arahy.Tifrunner.gnm1.ann1.0VBM10 Arachis hypogaea HOM05D004961 ORTHO05D006258 1.8e-218 763.1 669 59.2
ECA236G4958 Erigeron canadensis HOM05D004961 ORTHO05D006258 3.1e-218 762.3 661 59.8
Oeu003482.1 Olea europaea HOM05D004961 ORTHO05D006258 1.3e-216 756.9 659 60.2
AUR62004223 Chenopodium quinoa HOM05D004961 ORTHO05D006258 1.4e-215 753.4 649 59.8
AL5G43170 Arabidopsis lyrata HOM05D004961 ORTHO05D006258 3.2e-215 752.3 671 59.6
Lalb_Chr07g0189751 Lupinus albus HOM05D004961 ORTHO05D006258 6.0e-214 748.0 660 58.5
Carub.0005s2761 Capsella rubella HOM05D004961 ORTHO05D006258 1.3e-213 746.9 683 58.0
EL10Ac1g00903 Beta vulgaris HOM05D004961 ORTHO05D006258 8.7e-213 744.2 563 64.7
Ah.05g174990 Amaranthus hybridus HOM05D004961 ORTHO05D006258 1.1e-212 743.8 562 64.9
Phvul.010G084800 Phaseolus vulgaris HOM05D004961 ORTHO05D006258 1.5e-212 743.4 637 60.8
AT3G60850 Arabidopsis thaliana HOM05D004961 ORTHO05D006258 2.5e-212 742.7 674 59.2
VMungo0331G0268 Vigna mungo HOM05D004961 ORTHO05D006258 1.3e-211 740.3 623 61.2
Peaxi162Scf00021g01613 Petunia axillaris HOM05D004961 ORTHO05D006258 3.1e-210 735.7 634 61.8
DCAR_025114 Daucus carota HOM05D004961 ORTHO05D006258 9.0e-210 734.2 660 58.8
Sed0025415 Sechium edule HOM05D004961 ORTHO05D006258 4.5e-209 731.9 627 59.3
SHI25769 Sapria himalayana HOM05D004961 ORTHO05D006258 2.9e-208 729.2 643 57.4
ECA234G3702 Erigeron canadensis HOM05D004961 ORTHO05D006258 1.9e-207 726.5 667 55.6
Glyma.01G143700 Glycine max HOM05D004961 ORTHO05D006258 1.9e-207 726.5 585 62.7
BcaC07g42645 Brassica carinata HOM05D004961 ORTHO05D006258 4.2e-207 725.3 670 59.0
A09p53100 Brassica napus HOM05D004961 ORTHO05D006258 4.2e-207 725.3 668 58.8
BraA09t40736Z Brassica rapa HOM05D004961 ORTHO05D006258 7.1e-207 724.5 666 58.9
Sc26g0001210 Simmondsia chinensis HOM05D004961 ORTHO05D006258 3.5e-206 722.2 563 63.2
PSO478G4809 Papaver somniferum HOM05D004961 ORTHO05D006258 4.6e-206 721.8 564 61.7
BcaC07g40605 Brassica carinata HOM05D004961 ORTHO05D006258 6.7e-205 718.0 668 57.9
BolC8t51170H Brassica oleracea HOM05D004961 ORTHO05D006258 6.7e-205 718.0 668 57.9
C08p35800 Brassica napus HOM05D004961 ORTHO05D006258 1.1e-204 717.2 668 57.9
Glyma.03G023401 Glycine max HOM05D004961 ORTHO05D006258 1.5e-204 716.8 648 58.5
AUR62013625 Chenopodium quinoa HOM05D004961 ORTHO05D006258 3.7e-203 712.2 543 64.5
HanXRQChr09g0245711 Helianthus annuus HOM05D004961 ORTHO05D006258 6.9e-202 708.0 566 61.8
HanXRQChr06g0169541 Helianthus annuus HOM05D004961 ORTHO05D006258 5.8e-201 704.9 543 65.7
Lsat_1_v5_gn_7_7241 Lactuca sativa HOM05D004961 ORTHO05D006258 3.8e-200 702.2 677 58.5
ATR0810G227 Amborella trichopoda HOM05D004961 ORTHO05D006258 8.4e-200 701.0 644 57.0
HanXRQChr03g0093851 Helianthus annuus HOM05D004961 ORTHO05D006258 8.4e-200 701.0 666 56.8
PSO782G4206 Papaver somniferum HOM05D004961 ORTHO05D006258 1.1e-199 700.7 564 60.3
BcaC08g45088 Brassica carinata HOM05D004961 ORTHO05D006258 2.8e-195 686.0 671 56.5
C06p26950 Brassica napus HOM05D004961 ORTHO05D006258 2.8e-195 686.0 671 56.5
BolC6t37869H Brassica oleracea HOM05D004961 ORTHO05D006258 2.8e-195 686.0 671 56.5
unitig_8.g3388 Utricularia gibba HOM05D004961 ORTHO05D006258 6.9e-194 681.4 428 77.1
Nn4g26286 Nelumbo nucifera HOM05D004961 ORTHO05D006258 2.9e-192 676.0 533 63.4
CDE02G2832 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 3.9e-189 665.6 624 56.2
A07p25240 Brassica napus HOM05D004961 ORTHO05D006258 8.8e-189 664.5 674 55.2
BraA07t30166Z Brassica rapa HOM05D004961 ORTHO05D006258 5.9e-185 651.7 671 54.7
HanXRQChr16g0519241 Helianthus annuus HOM05D004961 ORTHO05D006258 1.1e-175 620.9 563 56.7
HPP92_025672 Vanilla planifolia HOM05D004961 ORTHO05D006258 2.0e-172 610.1 699 50.2
unitig_22.g6802 Utricularia gibba HOM05D004961 ORTHO05D006258 2.2e-171 606.7 420 72.6
SEGI_19190 Sequoiadendron giganteum HOM05D004961 ORTHO05D006258 1.8e-170 603.6 671 49.6
Os03g0247100 Oryza sativa ssp. japonica HOM05D004961 ORTHO05D006258 6.3e-163 578.6 680 49.7
CDE11G0257 Ceratophyllum demersum HOM05D004961 ORTHO05D006258 3.4e-156 556.2 520 58.1
GSVIVG01027619001 Vitis vinifera HOM05D004961 ORTHO05D006258 5.7e-148 528.9 418 64.6
Zm00001eb398630 Zea mays HOM05D004961 ORTHO05D006258 1.2e-142 511.1 558 50.9
ATR0582G166 Amborella trichopoda HOM05D004961 ORTHO05D006258 2.7e-137 493.4 576 45.7
Eucgr.D02450 Eucalyptus grandis HOM05D004961 ORTHO05D006258 8.3e-131 471.9 336 65.2
SMO358G0144 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 2.2e-115 420.6 432 50.5
SGA_v2.0_scaffold43G16471 Striga asiatica HOM05D004961 ORTHO05D006258 7.1e-114 415.6 639 40.2
SMO164G0066 Selaginella moellendorffii HOM05D004961 ORTHO05D006258 4.8e-110 402.9 396 50.5
Nn1g01213 Nelumbo nucifera HOM05D004961 ORTHO05D006258 1.2e-100 371.7 285 60.4
BcaB02g07397 Brassica carinata HOM05D004961 ORTHO05D006258 3.9e-80 303.5 351 49.3
unitig_22.g6801 Utricularia gibba HOM05D004961 ORTHO05D006258 9.1e-77 292.4 218 66.1
Cpa.g.sc18.116 Carica papaya HOM05D004961 ORTHO05D006258 4.5e-60 236.9 176 61.4
BcaC07g40606 Brassica carinata HOM05D003135 ORTHO05D003715 7.2e-58 229.6 373 39.4
BcaC07g40608 Brassica carinata HOM05D003135 ORTHO05D006258 2.6e-39 167.9 165 52.7
Zm00001eb010600 Zea mays HOM05D004961 ORTHO05D006258 4.9e-38 163.7 197 46.7
SMO115G0102 Selaginella moellendorffii HOM05D004961 ORTHO05D037335 4.1e-29 134.0 386 26.7
unitig_8.g3389 Utricularia gibba HOM05D004961 ORTHO05D006258 1.9e-26 125.2 142 50.0
BcaNung07137 Brassica carinata HOM05D004961 ORTHO05D006258 9.5e-26 122.9 77 77.9
HanXRQChr16g0519231 Helianthus annuus HOM05D004961 ORTHO05D006258 2.9e-22 111.3 101 57.4
BcaNung07139 Brassica carinata HOM05D004961 ORTHO05D006258 2.4e-21 108.2 93 57.0
BcaNung07135 Brassica carinata HOM05D004961 ORTHO05D006258 5.4e-13 80.5 189 38.1
MELO3C015747.2 Cucumis melo HOM05D004961 ORTHO05D044953 1.2e-12 79.3 139 41.0
HanXRQChr12g0366651 Helianthus annuus HOM05D001845 ORTHO05D001878 2.6e-07 61.6 53 62.3


User provided reference genes

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