Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 7.1e-223 776.9 388 100.0
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 1.6e-187 659.4 388 82.7
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 2.6e-164 582.4 363 79.1
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 5.3e-162 574.7 389 71.2
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 2.6e-161 572.4 388 72.2
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 1.2e-158 563.5 389 69.7
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 3.6e-158 562.0 388 71.6
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 3.0e-157 558.9 386 69.9
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 4.0e-157 558.5 380 72.9
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 6.7e-157 557.8 389 70.4
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 1.3e-155 553.5 390 67.9
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 8.2e-155 550.8 389 69.4
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 3.1e-154 548.9 394 66.8
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 2.0e-153 546.2 389 68.4
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 2.7e-153 545.8 392 67.1
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 2.2e-152 542.7 386 67.9
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 2.2e-152 542.7 392 67.1
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 2.9e-152 542.3 406 67.0
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 8.5e-152 540.8 406 66.5
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 1.9e-151 539.7 395 67.1
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 1.9e-151 539.7 389 67.9
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 2.5e-151 539.3 405 66.4
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 4.2e-151 538.5 391 67.0
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 4.2e-151 538.5 390 67.4
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 5.5e-151 538.1 387 68.0
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 7.2e-151 537.7 364 73.4
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 8.0e-150 534.3 389 67.6
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 1.0e-149 533.9 389 67.4
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 4.0e-149 531.9 382 69.1
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.6e-148 529.3 387 68.0
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 4.4e-148 528.5 390 67.9
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 5.7e-148 528.1 387 68.0
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 9.8e-148 527.3 406 64.5
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 1.3e-147 526.9 388 66.8
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 1.7e-147 526.6 388 66.8
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 2.2e-147 526.2 387 67.7
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 2.8e-147 525.8 388 66.2
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 2.8e-147 525.8 389 65.8
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 4.8e-147 525.0 387 67.4
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 8.3e-147 524.2 388 67.0
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 1.8e-146 523.1 387 67.2
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 1.8e-146 523.1 382 68.8
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 3.1e-146 522.3 387 67.4
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 9.1e-146 520.8 369 69.4
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 1.2e-145 520.4 367 69.2
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 1.2e-145 520.4 361 70.9
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 2.0e-145 519.6 392 63.0
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 3.5e-145 518.8 409 64.1
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 2.3e-144 516.2 388 64.9
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 8.6e-144 514.2 387 65.4
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 3.3e-143 512.3 396 65.2
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.6e-142 510.0 343 72.6
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 2.1e-142 509.6 392 66.1
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 2.1e-142 509.6 399 64.9
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 3.6e-142 508.8 384 64.6
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 4.7e-142 508.4 384 64.3
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 8.0e-142 507.7 388 64.2
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 1.0e-141 507.3 379 64.9
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 4.0e-141 505.4 388 63.4
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 1.2e-140 503.8 388 62.4
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 2.0e-140 503.1 386 64.5
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 5.7e-140 501.5 403 61.8
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 7.5e-140 501.1 383 64.5
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 2.2e-139 499.6 387 64.1
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 2.2e-139 499.6 415 61.9
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 2.8e-139 499.2 374 65.2
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 1.8e-138 496.5 390 62.3
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 1.8e-138 496.5 385 64.4
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 3.1e-138 495.7 386 62.2
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 4.1e-138 495.4 378 65.3
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 5.4e-138 495.0 382 64.9
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 7.0e-138 494.6 389 64.3
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 1.3e-136 490.3 390 63.1
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 1.7e-136 490.0 367 66.5
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 6.6e-136 488.0 389 63.8
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 7.3e-135 484.6 349 68.5
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 2.3e-133 479.6 387 61.2
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 1.2e-132 477.2 389 60.7
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 1.2e-132 477.2 387 60.7
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 4.4e-132 475.3 371 64.4
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 2.9e-131 472.6 387 60.5
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 3.7e-131 472.2 389 59.6
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 4.9e-131 471.9 387 59.4
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 1.9e-130 469.9 394 60.2
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 2.4e-130 469.5 388 59.3
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 7.0e-130 468.0 389 59.1
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 6.6e-128 461.5 389 58.9
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 6.6e-128 461.5 389 58.9
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 1.2e-126 457.2 422 56.4
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 6.2e-126 454.9 373 62.7
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 7.5e-124 448.0 409 57.7
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 1.3e-123 447.2 364 61.5
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 2.7e-121 439.5 321 66.4
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 3.1e-117 426.0 388 57.7
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 2.6e-116 422.9 346 61.3
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 7.1e-114 414.8 344 61.0
AUR62019310 Chenopodium quinoa HOM05D005612 ORTHO05D007014 2.5e-111 406.4 263 73.4
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 7.3e-111 404.8 335 60.0
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 2.7e-105 386.3 350 54.3
VMungo1127G0102 Vigna mungo HOM05D005612 ORTHO05D007014 3.0e-104 382.9 251 72.9
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 4.0e-101 372.5 306 60.1
SGA_v2.0_scaffold153G37000 Striga asiatica HOM05D005612 ORTHO05D007014 9.6e-95 351.3 222 78.8
MBI14_g08144_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 6.4e-91 338.6 265 65.7
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 8.4e-91 338.2 323 54.8
ATR0686G054 Amborella trichopoda HOM05D005612 ORTHO05D007014 3.3e-87 326.2 262 61.1
CARHR140520 Cardamine hirsuta HOM05D005612 ORTHO05D007014 5.5e-82 308.9 201 71.1
Aa31LG1G26830 Aethionema arabicum HOM05D005612 ORTHO05D007014 2.7e-81 306.6 193 71.5
Duzib138G0844 Durio zibethinus HOM05D005612 ORTHO05D007014 6.5e-75 285.4 163 81.0
SMO119G0175 Selaginella moellendorffii HOM05D005612 ORTHO05D007014 7.9e-73 278.5 271 49.4
Dinv32369 Davidia involucrata HOM05D005612 ORTHO05D007014 6.7e-64 248.8 194 66.0
Zm00001eb012290 Zea mays HOM05D005612 ORTHO05D007014 2.5e-63 246.9 188 62.8
Zm00001eb249030 Zea mays HOM05D005612 ORTHO05D007014 2.2e-62 243.8 178 66.3
FAN19G0199 Fragaria x ananassa HOM05D005612 ORTHO05D007014 2.0e-60 237.3 130 81.5
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis HOM05D005612 ORTHO05D007014 4.4e-55 219.5 219 52.1
MSTRG.28297 Avicennia marina HOM05D005612 ORTHO05D007014 8.2e-54 215.3 113 86.7
Pp3c17_6010 Physcomitrium patens HOM05D005612 ORTHO05D007014 5.0e-51 206.1 212 48.1
CARHR140530 Cardamine hirsuta HOM05D005612 ORTHO05D007014 5.0e-43 179.5 189 48.1
Medtr8g102045 Medicago truncatula HOM05D005612 ORTHO05D007014 7.2e-42 175.6 124 70.2
Medtr8g102040 Medicago truncatula HOM05D005612 ORTHO05D007014 7.5e-39 165.6 130 62.3
Oeu011925.1 Olea europaea HOM05D005612 ORTHO05D007014 1.8e-37 161.0 200 46.5
Zm00001eb385140 Zea mays HOM05D005612 ORTHO05D007014 1.8e-37 161.0 133 60.2
Zm00001eb084960 Zea mays HOM05D005612 ORTHO05D007014 2.0e-36 157.5 133 59.4
Rhsim01G0149000 Rhododendron simsii HOM05D005612 ORTHO05D007014 2.6e-31 140.6 240 35.8
Gohir.A08G135200 Gossypium hirsutum HOM05D005612 ORTHO05D007014 2.2e-30 137.5 167 45.5
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 4.9e-30 136.3 84 75.0
SEGI_33395 Sequoiadendron giganteum HOM05D005612 ORTHO05D007014 6.6e-27 125.9 173 41.6
Gohir.A08G135550 Gossypium hirsutum HOM05D005612 ORTHO05D007014 2.6e-23 114.0 104 57.7
Glyma.20G076400 Glycine max HOM05D005612 ORTHO05D007014 3.4e-23 113.6 75 66.7
TAR626G0370 Trochodendron aralioides HOM05D005612 ORTHO05D007014 7.5e-23 112.5 63 81.0
Haze_18350 Corylus avellana HOM05D005612 ORTHO05D007014 1.4e-21 108.2 72 72.2
Zm00001eb321930 Zea mays HOM05D005612 ORTHO05D007014 1.4e-21 108.2 109 52.3
MBI14_g08143_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 9.2e-21 105.5 114 49.1
Os06g0571300 Oryza sativa ssp. japonica HOM05D005612 ORTHO05D007014 2.8e-17 94.0 94 54.3
MD15G1255900 Malus domestica HOM05D001392 ORTHO05D036605 2.9e-14 84.0 45 86.7
Lalb_Chr08g0243441 Lupinus albus HOM05D005612 ORTHO05D007014 3.0e-11 73.9 45 75.6
Medtr8g102042 Medicago truncatula HOM05D005612 ORTHO05D007014 7.3e-10 69.3 66 53.0
Dinv39084 Davidia involucrata HOM05D005612 ORTHO05D007014 6.2e-09 66.2 105 37.1
Lalb_Chr16g0388221 Lupinus albus HOM05D005612 ORTHO05D007014 1.3e-06 58.5 34 73.5


User provided reference genes

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