Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01564 Erythranthe guttata HOM05D000104 ORTHO05D013430 1.1e-40 169.5 83 100.0
SGA_v2.0_scaffold153G36942 Striga asiatica HOM05D000104 ORTHO05D008354 1.9e-24 115.5 65 80.0
SalBow5G1524 Salvia bowleyana HOM05D000104 ORTHO05D008354 4.2e-24 114.4 95 61.1
ECA236G2937 Erigeron canadensis HOM05D000104 ORTHO05D008354 5.3e-19 97.4 65 66.2
HanXRQChr06g0168811 Helianthus annuus HOM05D000104 ORTHO05D008354 2.0e-18 95.5 65 67.7
Nitab4.5_0004415g0060 Nicotiana tabacum HOM05D000104 ORTHO05D008354 6.5e-17 90.5 65 67.7
Oeu009614.2 Olea europaea HOM05D000104 ORTHO05D008354 6.5e-17 90.5 65 66.2
DCAR_032106 Daucus carota HOM05D000104 ORTHO05D008354 2.5e-16 88.6 65 64.6
Lsat_1_v5_gn_7_11220 Lactuca sativa HOM05D000104 ORTHO05D008354 3.2e-16 88.2 63 66.7
Prupe.2G122400 Prunus persica HOM05D000104 ORTHO05D008354 3.2e-16 88.2 65 64.6
Sopen01g036380 Solanum pennellii HOM05D000104 ORTHO05D008354 4.2e-16 87.8 65 64.6
Dinv44094 Davidia involucrata HOM05D000104 ORTHO05D008354 5.5e-16 87.4 65 66.2
PGSC0003DMG400025981 Solanum tuberosum HOM05D000104 ORTHO05D008354 9.4e-16 86.7 65 63.1
Solyc01g090650.1 Solanum lycopersicum HOM05D000104 ORTHO05D008354 1.2e-15 86.3 65 63.1
Peaxi162Scf00377g00830 Petunia axillaris HOM05D000104 ORTHO05D008354 2.7e-15 85.1 82 52.4
PGR004G1640 Punica granatum HOM05D000104 ORTHO05D008354 2.7e-15 85.1 66 65.2
GSVIVG01018218001 Vitis vinifera HOM05D000104 ORTHO05D008354 2.7e-15 85.1 62 67.7
MD07G1098400 Malus domestica HOM05D000104 ORTHO05D008354 3.6e-15 84.7 65 61.5
Thecc.01G387600 Theobroma cacao HOM05D000104 ORTHO05D008354 3.6e-15 84.7 65 66.2
QL04p034775 Quercus lobata HOM05D000104 ORTHO05D008354 8.0e-15 83.6 66 62.1
CANSAT21G1228 Cannabis sativa HOM05D000104 ORTHO05D008354 1.0e-14 83.2 65 64.6
Cc02_g24760 Coffea canephora HOM05D000104 ORTHO05D008354 1.0e-14 83.2 62 64.5
RcHm_v2.0_Chr1g0346091 Rosa chinensis HOM05D000104 ORTHO05D008354 1.0e-14 83.2 65 61.5
Atru.chr5.195 Acer truncatum HOM05D000104 ORTHO05D008354 4.0e-14 81.3 66 60.6
Gohir.D08G158800 Gossypium hirsutum HOM05D000104 ORTHO05D008354 4.0e-14 81.3 65 61.5
Lalb_Chr03g0040101 Lupinus albus HOM05D000104 ORTHO05D008354 6.8e-14 80.5 65 55.4
Duzib133G0313 Durio zibethinus HOM05D000104 ORTHO05D008354 8.8e-14 80.1 65 60.0
TAR503G0004 Trochodendron aralioides HOM05D000104 ORTHO05D008354 8.8e-14 80.1 62 61.3
FvH4_7g09450 Fragaria vesca HOM05D000104 ORTHO05D008354 1.2e-13 79.7 64 59.4
Manes.04G038200 Manihot esculenta HOM05D000104 ORTHO05D008354 1.2e-13 79.7 65 55.4
Nitab4.5_0003110g0070 Nicotiana tabacum HOM05D000104 ORTHO05D008354 1.2e-13 79.7 80 52.5
Rhsim07G0033300 Rhododendron simsii HOM05D001240 ORTHO05D008354 1.5e-13 79.3 61 60.7
Gorai.004G164900 Gossypium raimondii HOM05D000104 ORTHO05D008354 2.0e-13 79.0 65 60.0
Haze_02745 Corylus avellana HOM05D000104 ORTHO05D013430 3.4e-13 78.2 79 55.7
Aqoxy5G04143 Aquilegia oxysepala HOM05D000104 ORTHO05D008354 5.7e-13 77.4 65 58.5
HPP92_022464 Vanilla planifolia HOM05D000104 ORTHO05D008354 5.7e-13 77.4 65 53.8
Aa31LG1G26570 Aethionema arabicum HOM05D000104 ORTHO05D008354 7.5e-13 77.0 65 55.4
FAN06G0717 Fragaria x ananassa HOM05D000104 ORTHO05D008354 9.8e-13 76.6 61 60.7
FAN06G1402 Fragaria x ananassa HOM05D000104 ORTHO05D008354 9.8e-13 76.6 61 60.7
CSS0013679 Camellia sinensis var. sinensis HOM05D000104 ORTHO05D008354 1.3e-12 76.3 61 60.7
CDE11G0513 Ceratophyllum demersum HOM05D000104 ORTHO05D008354 1.3e-12 76.3 82 50.0
THA.LOC104802482 Tarenaya hassleriana HOM05D000104 ORTHO05D008354 1.3e-12 76.3 65 56.9
Phvul.008G141500 Phaseolus vulgaris HOM05D000104 ORTHO05D008354 2.8e-12 75.1 65 55.4
Ciclev10018815m.g Citrus clementina HOM05D000104 ORTHO05D008354 3.7e-12 74.7 62 58.1
FAN10G0005 Fragaria x ananassa HOM05D000104 ORTHO05D008354 3.7e-12 74.7 61 59.0
Nn1g00931 Nelumbo nucifera HOM05D000104 ORTHO05D008354 3.7e-12 74.7 65 53.8
Hund17069 Selenicereus undatus HOM05D000104 ORTHO05D008354 4.8e-12 74.3 82 48.8
AT2G44980 Arabidopsis thaliana HOM05D000104 ORTHO05D008354 6.3e-12 73.9 65 53.8
arahy.Tifrunner.gnm1.ann1.G09REB Arachis hypogaea HOM05D000104 ORTHO05D008354 6.3e-12 73.9 82 43.9
FAN10G3495 Fragaria x ananassa HOM05D000104 ORTHO05D008354 8.3e-12 73.6 60 60.0
MBI04_g09528_MAGBIO Magnolia biondii HOM05D000104 ORTHO05D008354 8.3e-12 73.6 62 59.7
Potri.014G056700 Populus trichocarpa HOM05D000104 ORTHO05D008354 8.3e-12 73.6 68 52.9
Medtr7g039320 Medicago truncatula HOM05D000104 ORTHO05D008354 1.1e-11 73.2 65 53.8
COL.COLO4_12448 Corchorus olitorius HOM05D000104 ORTHO05D008354 1.4e-11 72.8 65 58.5
PSO170G6209 Papaver somniferum HOM05D000104 ORTHO05D008354 1.4e-11 72.8 65 55.4
PSO384G0152 Papaver somniferum HOM05D000104 ORTHO05D008354 1.4e-11 72.8 65 52.3
PSO407G0156 Papaver somniferum HOM05D000104 ORTHO05D008354 1.4e-11 72.8 65 55.4
AL4G44080 Arabidopsis lyrata HOM05D000104 ORTHO05D008354 1.8e-11 72.4 65 52.3
Lj7C540T8 Lonicera japonica HOM05D000104 ORTHO05D008354 1.8e-11 72.4 65 56.9
Lj1g0027884 Lotus japonicus HOM05D000104 ORTHO05D008354 1.8e-11 72.4 65 53.8
Sp4g27050 Schrenkiella parvula HOM05D000104 ORTHO05D008354 1.8e-11 72.4 65 55.4
Sed0015521 Sechium edule HOM05D000104 ORTHO05D008354 1.8e-11 72.4 65 53.8
Zm00001eb404510 Zea mays HOM05D000104 ORTHO05D008354 1.8e-11 72.4 63 57.1
Glyma.01G073400 Glycine max HOM05D000104 ORTHO05D008354 2.4e-11 72.0 65 53.8
PSO384G1113 Papaver somniferum HOM05D000104 ORTHO05D008354 2.4e-11 72.0 65 52.3
AUR62004136 Chenopodium quinoa HOM05D000104 ORTHO05D008354 3.1e-11 71.6 65 55.4
MELO3C022279.2 Cucumis melo HOM05D000104 ORTHO05D008354 3.1e-11 71.6 61 57.4
Sabra14G0041300 Salix brachista HOM05D000104 ORTHO05D008354 5.4e-11 70.9 67 47.8
EL10Ac1g00807 Beta vulgaris HOM05D000104 ORTHO05D008354 7.0e-11 70.5 63 57.1
Ca_07352_v3 Cicer arietinum L. HOM05D000104 ORTHO05D008354 9.1e-11 70.1 61 57.4
Os03g0101700 Oryza sativa ssp. japonica HOM05D000104 ORTHO05D013430 1.2e-10 69.7 63 50.8
TPR.G39130 Trifolium pratense HOM05D000104 ORTHO05D013430 2.0e-10 68.9 61 55.7
Thhalv10001305m.g Eutrema salsugineum HOM05D000104 ORTHO05D008354 3.5e-10 68.2 62 56.5
Medtr7g045502 Medicago truncatula HOM05D000104 ORTHO05D013430 3.5e-10 68.2 63 52.4
VMungo1383G2128 Vigna mungo HOM05D000104 ORTHO05D008354 3.5e-10 68.2 63 50.8
arahy.Tifrunner.gnm1.ann1.195NUB Arachis hypogaea HOM05D000104 ORTHO05D008354 1.0e-09 66.6 82 41.5
ATR0057G042 Amborella trichopoda HOM05D000104 ORTHO05D013430 1.3e-09 66.2 68 51.5
C04p05940 Brassica napus HOM05D000104 ORTHO05D008354 1.3e-09 66.2 63 50.8
BolC4t22225H Brassica oleracea HOM05D000104 ORTHO05D008354 1.3e-09 66.2 63 50.8
ClCG06G002490 Citrullus lanatus HOM05D000104 ORTHO05D008354 1.3e-09 66.2 61 54.1
PSO782G4873 Papaver somniferum HOM05D000104 ORTHO05D013430 2.2e-09 65.5 65 46.2
BraA05t19483Z Brassica rapa HOM05D000104 ORTHO05D008354 3.8e-09 64.7 63 50.8
Psat3g158480 Pisum sativum HOM05D000104 ORTHO05D013430 6.5e-09 63.9 59 55.9
A05p05090 Brassica napus HOM05D000104 ORTHO05D008354 1.1e-08 63.2 63 50.8
CARHR140240 Cardamine hirsuta HOM05D000104 ORTHO05D008354 3.2e-08 61.6 62 51.6
Pp3c10_6710 Physcomitrium patens HOM05D000104 ORTHO05D008354 4.7e-07 57.8 32 81.2
BcaNung03081 Brassica carinata HOM05D015057 ORTHO05D013430 2.3e-06 55.5 55 52.7
Sc23g0004880 Simmondsia chinensis HOM05D000104 ORTHO05D008354 3.0e-06 55.1 48 52.1
SEGI_05219 Sequoiadendron giganteum HOM05D000104 ORTHO05D048811 8.8e-06 53.5 69 44.9


User provided reference genes

Program Settings