Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01532 Erythranthe guttata HOM05D006946 ORTHO05D008634 4.6e-189 664.5 349 100.0
MSTRG.20688 Avicennia marina HOM05D006946 ORTHO05D008634 5.0e-127 458.4 349 69.1
SalBow5G3575 Salvia bowleyana HOM05D006946 ORTHO05D008634 4.7e-125 451.8 359 68.2
SGA_v2.0_scaffold340G49324 Striga asiatica HOM05D006946 ORTHO05D008634 1.3e-114 417.2 366 60.9
CSS0010598 Camellia sinensis var. sinensis HOM05D006946 ORTHO05D008634 1.2e-107 394.0 347 60.8
Rhsim07G0036200 Rhododendron simsii HOM05D006946 ORTHO05D008634 3.7e-106 389.0 349 59.6
vmacro13499 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 4.9e-106 388.7 349 58.7
Actinidia32506 Actinidia chinensis HOM05D006946 ORTHO05D008634 8.6e-103 377.9 344 57.8
GSVIVG01018284001 Vitis vinifera HOM05D006946 ORTHO05D008634 1.4e-100 370.5 356 55.3
Ciclev10020918m.g Citrus clementina HOM05D006946 ORTHO05D008634 6.8e-100 368.2 346 57.2
Cc02_g25140 Coffea canephora HOM05D006946 ORTHO05D008634 1.5e-99 367.1 354 57.9
vmacro13524 Vaccinium macrocarpon HOM05D006946 ORTHO05D008634 2.9e-98 362.8 409 50.4
Thecc.01G395400 Theobroma cacao HOM05D006946 ORTHO05D008634 3.7e-98 362.5 343 55.7
Atru.chr5.122 Acer truncatum HOM05D006946 ORTHO05D008634 4.1e-97 359.0 352 54.0
TAR629G0179 Trochodendron aralioides HOM05D006946 ORTHO05D008634 6.0e-96 355.1 357 54.3
CAN.G1473.5 Capsicum annuum HOM05D006946 ORTHO05D008634 3.9e-95 352.4 320 60.3
Hma1.2p1_0072F.1_g038310 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 5.1e-95 352.1 357 54.9
Nitab4.5_0007027g0020 Nicotiana tabacum HOM05D006946 ORTHO05D008634 6.6e-95 351.7 343 53.9
PGSC0003DMG400025996 Solanum tuberosum HOM05D006946 ORTHO05D008634 8.6e-95 351.3 327 57.5
COL.COLO4_12403 Corchorus olitorius HOM05D006946 ORTHO05D008634 4.7e-93 345.5 351 54.7
Solyc01g090220.4 Solanum lycopersicum HOM05D006946 ORTHO05D008634 6.2e-93 345.1 327 57.2
VMungo0331G1797 Vigna mungo HOM05D006946 ORTHO05D008634 8.1e-93 344.7 354 52.3
Phvul.010G049700 Phaseolus vulgaris HOM05D006946 ORTHO05D008634 1.1e-92 344.4 356 53.1
Duzib133G0968 Durio zibethinus HOM05D006946 ORTHO05D008634 1.5e-91 340.5 345 52.5
Haze_02851 Corylus avellana HOM05D006946 ORTHO05D008634 4.4e-91 339.0 356 52.2
Potri.002G138000 Populus trichocarpa HOM05D006946 ORTHO05D008634 1.3e-90 337.4 357 51.5
Sopen01g036020 Solanum pennellii HOM05D006946 ORTHO05D008634 1.3e-90 337.4 353 53.3
Glyma.03G110700 Glycine max HOM05D006946 ORTHO05D008634 1.7e-90 337.0 357 50.4
HanXRQChr13g0423251 Helianthus annuus HOM05D006946 ORTHO05D008634 2.9e-90 336.3 326 56.4
QL04p030124 Quercus lobata HOM05D006946 ORTHO05D008634 2.9e-90 336.3 340 53.8
Cfa011066 Carpinus fangiana HOM05D006946 ORTHO05D008634 6.4e-90 335.1 346 53.5
PGR042G0965 Punica granatum HOM05D006946 ORTHO05D008634 1.9e-89 333.6 355 50.4
ECA240G0199 Erigeron canadensis HOM05D006946 ORTHO05D008634 2.4e-89 333.2 287 59.6
Sp5g02920 Schrenkiella parvula HOM05D006946 ORTHO05D008634 5.4e-89 332.0 280 58.6
arahy.Tifrunner.gnm1.ann1.GB8G30 Arachis hypogaea HOM05D006946 ORTHO05D008634 9.2e-89 331.3 352 51.1
CANSAT25G1232 Cannabis sativa HOM05D006946 ORTHO05D008634 1.2e-88 330.9 348 52.3
Gorai.008G109100 Gossypium raimondii HOM05D006946 ORTHO05D008634 4.6e-88 328.9 347 53.0
CARHR170620 Cardamine hirsuta HOM05D006946 ORTHO05D008634 1.0e-87 327.8 279 58.1
arahy.Tifrunner.gnm1.ann1.4A1F8H Arachis hypogaea HOM05D006946 ORTHO05D008634 1.3e-87 327.4 352 50.9
Lsat_1_v5_gn_3_126900 Lactuca sativa HOM05D006946 ORTHO05D008634 3.0e-87 326.2 356 53.1
THA.LOC104817188 Tarenaya hassleriana HOM05D006946 ORTHO05D008634 3.9e-87 325.9 345 51.3
RcHm_v2.0_Chr1g0347961 Rosa chinensis HOM05D006946 ORTHO05D008634 1.1e-86 324.3 277 59.2
PSO675G1257 Papaver somniferum HOM05D006946 ORTHO05D008634 1.9e-86 323.6 352 51.7
TPR.G33124 Trifolium pratense HOM05D006946 ORTHO05D008634 3.3e-86 322.8 364 49.5
FAN06G0853 Fragaria x ananassa HOM05D006946 ORTHO05D008634 9.6e-86 321.2 349 50.1
Carub.0005s2704 Capsella rubella HOM05D006946 ORTHO05D008634 1.2e-85 320.9 280 57.1
Lj3g0014310 Lotus japonicus HOM05D006946 ORTHO05D008634 1.6e-85 320.5 336 52.1
Aqoxy1G01627 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 2.1e-85 320.1 357 50.4
FAN06G0591 Fragaria x ananassa HOM05D006946 ORTHO05D008634 3.6e-85 319.3 349 50.1
AT3G60300 Arabidopsis thaliana HOM05D006946 ORTHO05D008634 6.2e-85 318.5 281 57.7
Thhalv10006060m.g Eutrema salsugineum HOM05D006946 ORTHO05D008634 8.1e-85 318.2 281 55.9
PSO717G0092 Papaver somniferum HOM05D006946 ORTHO05D008634 8.1e-85 318.2 352 51.4
Aqoxy5G04137 Aquilegia oxysepala HOM05D006946 ORTHO05D008634 1.1e-84 317.8 348 50.0
FvH4_7g10220 Fragaria vesca HOM05D006946 ORTHO05D008634 1.8e-84 317.0 349 49.3
Gohir.D12G100200 Gossypium hirsutum HOM05D006946 ORTHO05D008634 2.4e-84 316.6 345 51.3
TWI14G0580 Tripterygium wilfordii HOM05D006946 ORTHO05D008634 3.1e-84 316.2 340 52.9
FAN03G2893 Fragaria x ananassa HOM05D006946 ORTHO05D008634 1.2e-83 314.3 349 49.6
Medtr8g006950 Medicago truncatula HOM05D006946 ORTHO05D008634 2.0e-83 313.5 355 49.0
A04p01710 Brassica napus HOM05D006946 ORTHO05D008634 2.6e-83 313.2 276 56.9
Aa31LG10G14420 Aethionema arabicum HOM05D006946 ORTHO05D008634 4.4e-83 312.4 296 55.4
FAN10G0617 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.8e-83 312.0 348 50.3
FAN10G1802 Fragaria x ananassa HOM05D006946 ORTHO05D008634 5.8e-83 312.0 348 50.3
Nn1g00836 Nelumbo nucifera HOM05D006946 ORTHO05D008634 5.8e-83 312.0 348 51.1
C04p32350 Brassica napus HOM05D006946 ORTHO05D008634 1.7e-82 310.5 289 56.4
Ca_25802_v3 Cicer arietinum L. HOM05D006946 ORTHO05D008634 1.1e-81 307.8 357 48.2
BolC4t24784H Brassica oleracea HOM05D006946 ORTHO05D008634 6.6e-79 298.5 299 53.5
Gohir.A12G097300 Gossypium hirsutum HOM05D006946 ORTHO05D008634 6.6e-79 298.5 250 60.0
Sabra02G0106500 Salix brachista HOM05D006946 ORTHO05D008634 8.7e-79 298.1 435 42.8
EL10Ac1g00757 Beta vulgaris HOM05D006946 ORTHO05D008634 1.1e-78 297.7 353 50.4
BraA04t15895Z Brassica rapa HOM05D006946 ORTHO05D008634 1.5e-78 297.4 294 52.7
Lalb_Chr07g0195411 Lupinus albus HOM05D006946 ORTHO05D008634 4.3e-78 295.8 357 49.3
Eucgr.E01546 Eucalyptus grandis HOM05D006946 ORTHO05D008634 7.3e-78 295.0 362 45.9
Sc02g0003120 Simmondsia chinensis HOM05D006946 ORTHO05D008634 7.3e-78 295.0 369 45.8
AL5G42520 Arabidopsis lyrata HOM05D006946 ORTHO05D008634 1.3e-77 294.3 276 54.0
unitig_750.g28410 Utricularia gibba HOM05D006946 ORTHO05D008634 1.4e-76 290.8 358 49.2
Psat4g224200 Pisum sativum HOM05D006946 ORTHO05D008634 1.8e-76 290.4 338 45.6
Nitab4.5_0000920g0010 Nicotiana tabacum HOM05D006946 ORTHO05D008634 5.8e-75 285.4 360 45.8
Zm00001eb200010 Zea mays HOM05D006946 ORTHO05D008634 6.0e-72 275.4 364 44.8
Ah.05g177890 Amaranthus hybridus HOM05D006946 ORTHO05D008634 2.3e-71 273.5 314 50.0
CiPaw.14G020200 Carya illinoinensis HOM05D006946 ORTHO05D008634 8.1e-69 265.0 199 61.8
Peaxi162Scf00475g00422 Petunia axillaris HOM05D000253 ORTHO05D000149 5.3e-68 262.3 414 41.3
AUR62023403 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.5e-67 260.8 325 47.4
HPP92_022132 Vanilla planifolia HOM05D006946 ORTHO05D008634 7.6e-67 258.5 355 41.7
HPP92_022105 Vanilla planifolia HOM05D006946 ORTHO05D008634 2.9e-66 256.5 356 41.9
ATR0057G021 Amborella trichopoda HOM05D006946 ORTHO05D008634 6.4e-66 255.4 332 44.3
Dinv43613 Davidia involucrata HOM05D006946 ORTHO05D008634 9.6e-62 241.5 239 54.8
Actinidia18349 Actinidia chinensis HOM05D006946 ORTHO05D008634 1.2e-59 234.6 246 53.3
Lj9A556T13 Lonicera japonica HOM05D006946 ORTHO05D008634 2.6e-59 233.4 250 54.8
Manes.05G055200 Manihot esculenta HOM05D006946 ORTHO05D008634 4.9e-58 229.2 254 53.1
AUR62013748 Chenopodium quinoa HOM05D006946 ORTHO05D008634 3.2e-57 226.5 325 44.3
Hund27407 Selenicereus undatus HOM05D006946 ORTHO05D008634 1.3e-53 214.5 558 30.8
Prupe.2G132200 Prunus persica HOM05D006946 ORTHO05D008634 9.3e-49 198.4 263 44.1
Mapoly0040s0025 Marchantia polymorpha HOM05D006946 ORTHO05D008634 2.7e-48 196.8 312 36.5
Medtr5g027110 Medicago truncatula HOM05D006946 ORTHO05D008634 5.7e-46 189.1 248 46.4
Hma1.2p1_0072F.1_g038320 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 7.4e-46 188.7 161 59.6
AagrBONN_evm.TU.Sc2ySwM_117.2461 Anthoceros agrestis HOM05D006946 ORTHO05D008634 1.9e-41 174.1 260 37.3
PSO017G5203 Papaver somniferum HOM05D006946 ORTHO05D008634 6.1e-40 169.1 175 49.1
Potri.014G048000 Populus trichocarpa HOM05D006946 ORTHO05D008634 3.0e-39 166.8 235 41.7
SMO352G0084 Selaginella moellendorffii HOM05D006946 ORTHO05D008634 4.2e-33 146.4 163 45.4
Cpa.g.sc22.64 Carica papaya HOM05D006946 ORTHO05D008634 6.7e-31 139.0 103 64.1
CBR_g38735 Chara braunii HOM05D000019 ORTHO05D000353 1.6e-27 127.9 344 28.2
Cpa.g.sc22.65 Carica papaya HOM05D006946 ORTHO05D008634 1.8e-20 104.4 227 32.6
Psat1g142640 Pisum sativum HOM05D006946 ORTHO05D008634 1.7e-18 97.8 104 48.1
MCO13G420 Micromonas commoda HOM05D006946 ORTHO05D008634 1.9e-17 94.4 168 31.5
Psat2g026240 Pisum sativum HOM05D006946 ORTHO05D008634 3.6e-16 90.1 98 48.0
Psat1g142600 Pisum sativum HOM05D006946 ORTHO05D008634 4.4e-14 83.2 89 48.3
MD02G1213400 Malus domestica HOM05D006946 ORTHO05D008634 1.7e-13 81.3 117 40.2
AUR62044571 Chenopodium quinoa HOM05D006946 ORTHO05D008634 1.8e-12 77.8 334 25.1
Hma1.2p1_0072F.1_g038330 Hydrangea macrophylla HOM05D006946 ORTHO05D008634 7.7e-11 72.4 46 69.6
SEGI_22555 Sequoiadendron giganteum HOM05D006946 ORTHO05D000002 7.7e-11 72.4 99 43.4
Cre13.g581801 Chlamydomonas reinhardtii HOM05D006946 ORTHO05D008634 5.0e-10 69.7 192 27.1
Psat5g300840 Pisum sativum HOM05D006946 ORTHO05D008634 1.5e-09 68.2 60 48.3
Os11g0565400 Oryza sativa ssp. japonica HOM05D006946 ORTHO05D008634 9.5e-09 65.5 45 66.7
HPP92_022101 Vanilla planifolia HOM05D006946 ORTHO05D008634 2.8e-08 63.9 46 63.0
QL04p089514 Quercus lobata HOM05D006946 ORTHO05D008634 1.0e-07 62.0 37 70.3
PRCOL_00003801 Prasinoderma coloniale HOM05D013257 ORTHO05D015313 1.4e-07 61.6 231 24.7
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 2.0e-06 57.8 118 32.2
Psat6g138360 Pisum sativum HOM05D000346 ORTHO05D008634 2.6e-06 57.4 75 45.3
SGA_v2.0_scaffold19G08736 Striga asiatica HOM05D002451 ORTHO05D007901 9.8e-06 55.5 43 67.4


User provided reference genes

Program Settings