Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01521 Erythranthe guttata HOM05D002564 ORTHO05D035172 2.8e-70 268.5 133 100.0
Migut.B01519 Erythranthe guttata HOM05D002564 ORTHO05D035172 9.4e-34 147.1 125 60.8
SalBow5G2822 Salvia bowleyana HOM05D002564 ORTHO05D035172 2.1e-25 119.4 123 45.5
TWI15G0629 Tripterygium wilfordii HOM05D002564 ORTHO05D003945 1.2e-12 77.0 101 36.6
Aqoxy3G02682 Aquilegia oxysepala HOM05D002564 ORTHO05D003945 2.0e-12 76.3 101 36.6
Carub.0008s0063 Capsella rubella HOM05D002564 ORTHO05D003945 2.7e-12 75.9 106 34.9
Thecc.03G242800 Theobroma cacao HOM05D002564 ORTHO05D003945 2.7e-12 75.9 101 35.6
Duzib205G0006 Durio zibethinus HOM05D002564 ORTHO05D003945 3.5e-12 75.5 96 36.5
Gohir.A12G213700 Gossypium hirsutum HOM05D002564 ORTHO05D003945 3.5e-12 75.5 100 35.0
TAR629G3463 Trochodendron aralioides HOM05D002564 ORTHO05D003945 3.5e-12 75.5 101 34.7
TAR004G0001 Trochodendron aralioides HOM05D002564 ORTHO05D003945 4.5e-12 75.1 101 35.6
TWI60G0953 Tripterygium wilfordii HOM05D002564 ORTHO05D003945 5.9e-12 74.7 102 35.3
Gohir.A08G165400 Gossypium hirsutum HOM05D002564 ORTHO05D003945 7.8e-12 74.3 96 35.4
Sabra03G0053400 Salix brachista HOM05D002564 ORTHO05D003945 7.8e-12 74.3 99 35.4
TAR374G0594 Trochodendron aralioides HOM05D002564 ORTHO05D003945 7.8e-12 74.3 101 35.6
TAR375G0233 Trochodendron aralioides HOM05D002564 ORTHO05D003945 7.8e-12 74.3 96 37.5
CSS0020501 Camellia sinensis var. sinensis HOM05D002564 ORTHO05D003945 1.0e-11 73.9 96 37.5
Gohir.D08G184100 Gossypium hirsutum HOM05D002564 ORTHO05D003945 1.3e-11 73.6 96 34.4
Gorai.004G193400 Gossypium raimondii HOM05D002564 ORTHO05D003945 1.3e-11 73.6 96 34.4
Duzib068G0289 Durio zibethinus HOM05D002564 ORTHO05D003945 1.7e-11 73.2 101 34.7
Hund11323 Selenicereus undatus HOM05D002564 ORTHO05D003945 1.7e-11 73.2 101 35.6
Sabra01G0121500 Salix brachista HOM05D002564 ORTHO05D003945 2.3e-11 72.8 103 33.0
Gohir.D11G027400 Gossypium hirsutum HOM05D002564 ORTHO05D003945 2.9e-11 72.4 96 35.4
Gorai.007G029900 Gossypium raimondii HOM05D002564 ORTHO05D003945 2.9e-11 72.4 96 35.4
Medtr5g013340 Medicago truncatula HOM05D002564 ORTHO05D003945 3.9e-11 72.0 95 36.8
Lj2C228T1 Lonicera japonica HOM05D002564 ORTHO05D003945 5.0e-11 71.6 101 34.7
Potri.003G082700 Populus trichocarpa HOM05D002564 ORTHO05D003945 5.0e-11 71.6 101 34.7
Lj4g0000920 Lotus japonicus HOM05D002564 ORTHO05D003945 6.6e-11 71.2 96 35.4
Manes.01G087400 Manihot esculenta HOM05D002564 ORTHO05D003945 6.6e-11 71.2 101 34.7
Manes.02G044200 Manihot esculenta HOM05D002564 ORTHO05D003945 6.6e-11 71.2 101 34.7
Nn1g00814 Nelumbo nucifera HOM05D002564 ORTHO05D003945 6.6e-11 71.2 101 37.6
Sc22g0001110 Simmondsia chinensis HOM05D002564 ORTHO05D003945 6.6e-11 71.2 96 36.5
Gohir.A11G028900 Gossypium hirsutum HOM05D002564 ORTHO05D003945 8.6e-11 70.9 96 34.4
Lj8A275T73 Lonicera japonica HOM05D002564 ORTHO05D003945 8.6e-11 70.9 96 35.4
Haze_07974 Corylus avellana HOM05D002564 ORTHO05D003945 1.1e-10 70.5 96 36.5
Gohir.D12G216300 Gossypium hirsutum HOM05D002564 ORTHO05D003945 1.1e-10 70.5 100 33.0
Gorai.008G231700 Gossypium raimondii HOM05D002564 ORTHO05D003945 1.1e-10 70.5 100 33.0
Psat4g075160 Pisum sativum HOM05D002564 ORTHO05D003945 1.1e-10 70.5 101 32.7
Cc08_g11460 Coffea canephora HOM05D002564 ORTHO05D003945 1.5e-10 70.1 96 35.4
Glyma.01G205200 Glycine max HOM05D002564 ORTHO05D003945 1.5e-10 70.1 96 33.3
Rhsim07G0118800 Rhododendron simsii HOM05D002564 ORTHO05D003945 1.5e-10 70.1 96 33.3
BcaC03g16944 Brassica carinata HOM05D002564 ORTHO05D003945 1.9e-10 69.7 108 34.3
C02p48480 Brassica napus HOM05D002564 ORTHO05D003945 1.9e-10 69.7 108 34.3
Cpa.g.sc89.3 Carica papaya HOM05D002564 ORTHO05D003945 1.9e-10 69.7 101 35.6
Thhalv10001130m.g Eutrema salsugineum HOM05D002564 ORTHO05D003945 1.9e-10 69.7 106 34.0
Rhsim07G0118600 Rhododendron simsii HOM05D002564 ORTHO05D003945 1.9e-10 69.7 96 33.3
Sp2g11930 Schrenkiella parvula HOM05D002564 ORTHO05D003945 1.9e-10 69.7 108 34.3
Carub.0007s2380 Capsella rubella HOM05D002564 ORTHO05D003945 2.5e-10 69.3 107 33.6
HanXRQChr13g0418211 Helianthus annuus HOM05D002564 ORTHO05D003945 2.5e-10 69.3 96 34.4
Hma1.2p1_3142F.1_g333090 Hydrangea macrophylla HOM05D002564 ORTHO05D003945 2.5e-10 69.3 100 35.0
Psat2g176040 Pisum sativum HOM05D002564 ORTHO05D003945 2.5e-10 69.3 96 34.4
THA.LOC104806682 Tarenaya hassleriana HOM05D002564 ORTHO05D003945 2.5e-10 69.3 101 33.7
CARHR224300 Cardamine hirsuta HOM05D002564 ORTHO05D003945 3.3e-10 68.9 107 32.7
Cfa012672 Carpinus fangiana HOM05D002564 ORTHO05D003945 3.3e-10 68.9 96 35.4
Oeu017210.1 Olea europaea HOM05D002564 ORTHO05D003945 3.3e-10 68.9 101 32.7
A02p30870 Brassica napus HOM05D002564 ORTHO05D003945 4.3e-10 68.6 108 34.3
Ca_24608_v3 Cicer arietinum L. HOM05D002564 ORTHO05D003945 4.3e-10 68.6 96 33.3
Potri.001G151800 Populus trichocarpa HOM05D002564 ORTHO05D003945 4.3e-10 68.6 101 33.7
TPR.G31430 Trifolium pratense HOM05D002564 ORTHO05D003945 4.3e-10 68.6 98 31.6
AL8G10960 Arabidopsis lyrata HOM05D002564 ORTHO05D003945 5.6e-10 68.2 106 32.1
Gohir.A03G004800 Gossypium hirsutum HOM05D002564 ORTHO05D003945 5.6e-10 68.2 95 33.7
PGR042G0532 Punica granatum HOM05D002564 ORTHO05D003945 5.6e-10 68.2 96 33.3
Aa31sc58G60 Aethionema arabicum HOM05D002564 ORTHO05D003945 7.3e-10 67.8 106 31.1
AT5G47120 Arabidopsis thaliana HOM05D002564 ORTHO05D003945 7.3e-10 67.8 106 32.1
CsaV3_3G049850 Cucumis sativus L. HOM05D002564 ORTHO05D003945 7.3e-10 67.8 96 34.4
EL10Ac5g12286 Beta vulgaris HOM05D002564 ORTHO05D003945 9.5e-10 67.4 101 31.7
Duzib084G1389 Durio zibethinus HOM05D002564 ORTHO05D003945 9.5e-10 67.4 96 33.3
Migut.E00823 Erythranthe guttata HOM05D002564 ORTHO05D003945 9.5e-10 67.4 101 31.7
Nitab4.5_0006594g0040 Nicotiana tabacum HOM05D002564 ORTHO05D003945 9.5e-10 67.4 101 32.7
VMungo0251G2763 Vigna mungo HOM05D002564 ORTHO05D003945 9.5e-10 67.4 96 31.2
Lalb_Chr09g0324201 Lupinus albus HOM05D002564 ORTHO05D003945 1.2e-09 67.0 96 31.2
Oeu054279.1 Olea europaea HOM05D002564 ORTHO05D003945 1.2e-09 67.0 95 33.7
Ciclev10021901m.g Citrus clementina HOM05D002564 ORTHO05D003945 1.6e-09 66.6 101 34.7
Eucgr.E00365 Eucalyptus grandis HOM05D002564 ORTHO05D003945 1.6e-09 66.6 101 35.6
Glyma.11G037700 Glycine max HOM05D002564 ORTHO05D003945 1.6e-09 66.6 96 31.2
HanXRQChr03g0089811 Helianthus annuus HOM05D002564 ORTHO05D003945 1.6e-09 66.6 104 35.6
Lalb_Chr16g0379371 Lupinus albus HOM05D002564 ORTHO05D003945 1.6e-09 66.6 96 31.2
Nitab4.5_0000185g0160 Nicotiana tabacum HOM05D002564 ORTHO05D003945 1.6e-09 66.6 96 33.3
Os02g0125300 Oryza sativa ssp. japonica HOM05D002564 ORTHO05D003945 1.6e-09 66.6 101 31.7
SGA_v2.0_scaffold6G03164 Striga asiatica HOM05D002564 ORTHO05D003945 1.6e-09 66.6 124 31.5
Nn6g33792 Nelumbo nucifera HOM05D002564 ORTHO05D003945 2.1e-09 66.2 101 33.7
Peaxi162Scf00446g00018 Petunia axillaris HOM05D002564 ORTHO05D003945 2.1e-09 66.2 101 31.7
PGSC0003DMG400026250 Solanum tuberosum HOM05D002564 ORTHO05D003945 2.1e-09 66.2 87 36.8
BcaC04g21644 Brassica carinata HOM05D002564 ORTHO05D003945 2.8e-09 65.9 108 34.3
BolC9t55809H Brassica oleracea HOM05D002564 ORTHO05D003945 2.8e-09 65.9 108 34.3
ClCG09G012790 Citrullus lanatus HOM05D002564 ORTHO05D003945 2.8e-09 65.9 96 33.3
Lsat_1_v5_gn_6_94980 Lactuca sativa HOM05D002564 ORTHO05D003945 2.8e-09 65.9 96 33.3
Ah.07g199070 Amaranthus hybridus HOM05D002564 ORTHO05D003945 3.6e-09 65.5 103 32.0
MELO3C003332.2 Cucumis melo HOM05D002564 ORTHO05D003945 3.6e-09 65.5 96 33.3
PSO063G6369 Papaver somniferum HOM05D002564 ORTHO05D003945 3.6e-09 65.5 101 29.7
Sopen08g026490 Solanum pennellii HOM05D002564 ORTHO05D003945 3.6e-09 65.5 87 35.6
AL7G37010 Arabidopsis lyrata HOM05D002564 ORTHO05D003945 4.7e-09 65.1 107 31.8
CARHR174270 Cardamine hirsuta HOM05D002564 ORTHO05D003945 4.7e-09 65.1 108 32.4
Lj2g0011904 Lotus japonicus HOM05D002564 ORTHO05D003945 4.7e-09 65.1 95 32.6
PSO782G2969 Papaver somniferum HOM05D002564 ORTHO05D003945 4.7e-09 65.1 101 29.7
Zm00001eb208690 Zea mays HOM05D002564 ORTHO05D003945 4.7e-09 65.1 96 34.4
Zm00001eb230820 Zea mays HOM05D002564 ORTHO05D003945 4.7e-09 65.1 96 35.4
BraA02t08100Z Brassica rapa HOM05D002564 ORTHO05D003945 6.1e-09 64.7 116 32.8
AUR62018857 Chenopodium quinoa HOM05D002564 ORTHO05D003945 6.1e-09 64.7 96 33.3
THA.LOC104798354 Tarenaya hassleriana HOM05D002564 ORTHO05D003945 6.1e-09 64.7 101 32.7
MSTRG.13775 Avicennia marina HOM05D002564 ORTHO05D003945 8.0e-09 64.3 96 32.3
CANSAT21G2002 Cannabis sativa HOM05D002564 ORTHO05D003945 8.0e-09 64.3 96 31.2
CDE04G2711 Ceratophyllum demersum HOM05D002564 ORTHO05D003945 8.0e-09 64.3 111 32.4
AUR62007154 Chenopodium quinoa HOM05D002564 ORTHO05D003945 8.0e-09 64.3 96 33.3
ClCG09G012780 Citrullus lanatus HOM05D002564 ORTHO05D003945 8.0e-09 64.3 96 32.3
Nitab4.5_0000500g0100 Nicotiana tabacum HOM05D002564 ORTHO05D003945 8.0e-09 64.3 101 32.7
C09p29450 Brassica napus HOM05D002564 ORTHO05D003945 1.0e-08 63.9 108 32.4
CAN.G761.18 Capsicum annuum HOM05D002564 ORTHO05D003945 1.0e-08 63.9 87 35.6
CsaV3_3G049840 Cucumis sativus L. HOM05D002564 ORTHO05D003945 1.0e-08 63.9 96 33.3
BcaB07g30791 Brassica carinata HOM05D002564 ORTHO05D003945 1.4e-08 63.5 108 33.3
MD04G1051800 Malus domestica HOM05D002564 ORTHO05D003945 1.4e-08 63.5 102 31.4
A09p22870 Brassica napus HOM05D002564 ORTHO05D003945 1.8e-08 63.2 108 32.4
BraA09t37889Z Brassica rapa HOM05D002564 ORTHO05D003945 1.8e-08 63.2 108 32.4
ECA240G1580 Erigeron canadensis HOM05D002564 ORTHO05D003945 1.8e-08 63.2 103 35.0
Glyma.05G064700 Glycine max HOM05D002564 ORTHO05D003945 1.8e-08 63.2 96 29.2
CiPaw.11G069700 Carya illinoinensis HOM05D002564 ORTHO05D003945 2.3e-08 62.8 96 33.3
MELO3C003331.2 Cucumis melo HOM05D002564 ORTHO05D003945 2.3e-08 62.8 96 32.3
Aa31LG6G330 Aethionema arabicum HOM05D002564 ORTHO05D003945 5.2e-08 61.6 111 30.6
CDE12G0326 Ceratophyllum demersum HOM05D002564 ORTHO05D003945 5.2e-08 61.6 97 33.0
Actinidia25904 Actinidia chinensis HOM05D002564 ORTHO05D003945 6.8e-08 61.2 88 34.1
MD06G1048300 Malus domestica HOM05D002564 ORTHO05D003945 6.8e-08 61.2 102 30.4
Nitab4.5_0007628g0040 Nicotiana tabacum HOM05D002564 ORTHO05D003945 6.8e-08 61.2 101 31.7
Peaxi162Scf00102g00836 Petunia axillaris HOM05D002564 ORTHO05D003945 6.8e-08 61.2 101 30.7
SalBow1G5297 Salvia bowleyana HOM05D002564 ORTHO05D003945 8.9e-08 60.8 101 29.7
SalBow1G6888 Salvia bowleyana HOM05D002564 ORTHO05D003945 8.9e-08 60.8 101 29.7
RcHm_v2.0_Chr7g0205291 Rosa chinensis HOM05D002564 ORTHO05D003945 1.2e-07 60.5 101 30.7
arahy.Tifrunner.gnm1.ann1.2KFK0B Arachis hypogaea HOM05D002564 ORTHO05D003945 1.5e-07 60.1 105 30.5
arahy.Tifrunner.gnm1.ann1.68ECIB Arachis hypogaea HOM05D002564 ORTHO05D003945 1.5e-07 60.1 105 30.5
VMungo1215G2437 Vigna mungo HOM05D002564 ORTHO05D003945 1.5e-07 60.1 96 29.2
unitig_22.g5495 Utricularia gibba HOM05D002564 ORTHO05D003945 2.6e-07 59.3 101 29.7
ATR0665G511 Amborella trichopoda HOM05D002564 ORTHO05D003945 3.4e-07 58.9 103 30.1
FAN13G1850 Fragaria x ananassa HOM05D002564 ORTHO05D003945 5.8e-07 58.2 101 29.7
QL12p009056 Quercus lobata HOM05D002564 ORTHO05D003945 5.8e-07 58.2 96 33.3
FvH4_5g20220 Fragaria vesca HOM05D002564 ORTHO05D003945 7.5e-07 57.8 101 29.7
FAN18G0105 Fragaria x ananassa HOM05D002564 ORTHO05D003945 7.5e-07 57.8 101 29.7
Sed0004432 Sechium edule HOM05D002564 ORTHO05D003945 7.5e-07 57.8 96 29.2
AagrBONN_evm.TU.Sc2ySwM_344.3906 Anthoceros agrestis HOM05D002564 ORTHO05D003945 9.8e-07 57.4 103 30.1
CARHR224290 Cardamine hirsuta HOM05D002564 ORTHO05D003945 9.8e-07 57.4 101 30.7
Sed0002752 Sechium edule HOM05D002564 ORTHO05D003945 9.8e-07 57.4 96 30.2
Prupe.5G058500 Prunus persica HOM05D002564 ORTHO05D003945 1.3e-06 57.0 101 28.7
Zm00001eb379560 Zea mays HOM05D002564 ORTHO05D003945 1.7e-06 56.6 103 30.1
HPP92_022395 Vanilla planifolia HOM05D002564 ORTHO05D003945 8.3e-06 54.3 101 28.7


User provided reference genes

Program Settings