Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 4.6e-217 758.8 888 100.0
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 6.0e-108 396.4 451 76.7
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 6.8e-88 329.7 292 58.9
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 9.9e-87 325.9 289 58.8
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 4.0e-72 277.3 296 51.4
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 2.1e-68 265.0 305 49.5
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 2.1e-65 255.0 255 54.1
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 1.1e-64 252.7 315 44.8
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 1.1e-64 252.7 313 46.6
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 3.1e-64 251.1 240 53.8
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 1.2e-63 249.2 240 53.8
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 2.0e-63 248.4 302 45.4
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 9.9e-63 246.1 293 46.4
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 9.9e-63 246.1 295 43.7
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 1.3e-62 245.7 296 46.6
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 4.9e-62 243.8 243 51.4
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 4.9e-62 243.8 253 49.4
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 8.4e-62 243.0 229 52.0
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 7.1e-61 240.0 241 51.0
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 3.5e-60 237.7 296 43.6
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 6.0e-60 236.9 294 45.9
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 6.0e-60 236.9 296 43.9
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 7.9e-60 236.5 242 48.3
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 7.9e-60 236.5 239 49.4
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 1.0e-59 236.1 251 48.2
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 1.8e-59 235.3 310 47.1
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 1.5e-58 232.3 297 44.8
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 1.9e-58 231.9 432 62.0
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 4.8e-57 227.3 206 53.4
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 4.8e-57 227.3 300 42.7
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 1.1e-56 226.1 250 46.4
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 2.4e-56 224.9 254 48.4
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 2.4e-56 224.9 298 42.3
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 2.4e-56 224.9 298 42.3
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 9.0e-56 223.0 260 45.8
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 1.7e-54 218.8 275 44.4
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 2.9e-54 218.0 279 44.8
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 3.8e-54 217.6 256 45.7
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 3.2e-53 214.5 228 50.9
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 4.2e-53 214.2 240 47.9
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 5.1e-51 207.2 259 44.4
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 6.7e-51 206.8 178 55.1
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 1.5e-50 205.7 269 43.1
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 7.4e-50 203.4 280 41.4
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 1.4e-48 199.1 181 53.6
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 1.8e-48 198.7 272 43.0
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.6e-47 194.9 302 39.7
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 5.9e-47 193.7 181 51.9
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 7.7e-47 193.4 181 54.1
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 1.3e-46 192.6 180 51.1
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 5.0e-46 190.7 238 43.3
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 1.9e-45 188.7 181 51.4
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.9e-45 188.7 181 50.3
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 7.2e-45 186.8 175 56.6
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 1.2e-44 186.0 181 51.4
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 2.1e-44 185.3 181 48.6
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 2.1e-44 185.3 180 51.7
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 3.6e-44 184.5 250 43.2
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 4.6e-44 184.1 236 45.3
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 5.1e-43 180.6 250 42.4
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 4.3e-42 177.6 170 52.4
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 7.4e-42 176.8 247 42.9
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 4.8e-41 174.1 249 43.8
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 4.8e-41 174.1 181 50.3
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 8.2e-41 173.3 243 39.9
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 2.4e-40 171.8 231 44.2
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.2e-39 169.5 181 49.7
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 1.2e-39 169.5 181 49.7
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 2.0e-39 168.7 174 51.1
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 1.9e-37 162.2 208 45.7
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 2.5e-37 161.8 181 45.3
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.1e-36 158.7 179 45.8
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 5.7e-34 150.6 176 48.3
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 4.1e-32 144.4 139 51.8
Migut.I00272 Erythranthe guttata HOM05D007595 ORTHO05D009570 9.1e-32 143.3 93 76.3
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 6.5e-30 137.1 111 58.6
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 2.7e-28 131.7 138 48.6
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.8e-27 129.0 113 54.9
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 6.7e-27 127.1 147 44.9
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 1.1e-26 126.3 109 56.0
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 5.3e-24 117.5 88 60.2
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 1.2e-23 116.3 125 49.6
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 1.6e-23 115.9 125 48.0
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 7.7e-23 113.6 88 58.0
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 8.5e-22 110.2 268 71.3
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 1.2e-20 106.3 87 57.5
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 2.3e-19 102.1 211 31.3
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 5.7e-18 97.4 113 46.0
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.3e-17 96.3 102 50.0
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 1.1e-16 93.2 129 51.2
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 1.8e-16 92.4 120 43.3
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 2.9e-14 85.1 92 44.6
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 6.1e-12 77.4 74 54.1
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 6.1e-12 77.4 102 46.1
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 6.8e-11 73.9 75 44.0
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 5.7e-10 70.9 102 47.1
Rhsim07G0038700 Rhododendron simsii HOM05D001455 ORTHO05D002670 4.1e-08 64.7 48 60.4
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 1.6e-07 62.8 54 53.7
ATR0665G577 Amborella trichopoda HOM05D007595 ORTHO05D009570 2.0e-07 62.4 122 40.2
AT1G11710 Arabidopsis thaliana HOM05D002890 ORTHO05D009847 1.3e-06 59.7 192 22.9
Lj4P128T51 Lonicera japonica HOM05D007347 ORTHO05D009296 1.7e-06 59.3 217 24.4
Haze_01905 Corylus avellana HOM05D006858 ORTHO05D008767 2.3e-06 58.9 199 22.1
Peaxi162Scf00016g00164 Petunia axillaris HOM05D006858 ORTHO05D008767 2.3e-06 58.9 194 21.1
Lalb_Chr10g0095481 Lupinus albus HOM05D006858 ORTHO05D008767 3.8e-06 58.2 213 23.0
SEGI_33508 Sequoiadendron giganteum HOM05D006858 ORTHO05D008767 3.8e-06 58.2 162 25.3
Actinidia17852 Actinidia chinensis HOM05D006858 ORTHO05D008767 6.6e-06 57.4 200 23.5
Duzib132G0284 Durio zibethinus HOM05D006858 ORTHO05D008767 6.6e-06 57.4 211 23.2


User provided reference genes

Program Settings