Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01408 Erythranthe guttata HOM05D004544 ORTHO05D005504 3.8e-91 338.2 175 100.0
SGA_v2.0_scaffold260G45890 Striga asiatica HOM05D004544 ORTHO05D005504 8.5e-75 283.9 158 89.9
SalBow5G3691 Salvia bowleyana HOM05D004544 ORTHO05D005504 6.5e-67 257.7 158 81.0
Oeu060709.1 Olea europaea HOM05D004544 ORTHO05D005504 8.5e-67 257.3 158 81.0
Cc02_g26820 Coffea canephora HOM05D004544 ORTHO05D005504 5.5e-66 254.6 158 81.0
Actinidia05839 Actinidia chinensis HOM05D004544 ORTHO05D005504 2.7e-65 252.3 158 79.7
GSVIVG01001349001 Vitis vinifera HOM05D004544 ORTHO05D005504 3.6e-65 251.9 158 79.7
Rhsim07G0049300 Rhododendron simsii HOM05D004544 ORTHO05D005504 1.0e-64 250.4 158 79.7
Sopen01g033220 Solanum pennellii HOM05D004544 ORTHO05D005504 2.0e-63 246.1 158 79.1
Solyc01g073660.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 5.7e-63 244.6 158 77.8
CAN.G1361.5 Capsicum annuum HOM05D004544 ORTHO05D005504 1.7e-62 243.0 158 79.1
CSS0044763 Camellia sinensis var. sinensis HOM05D004544 ORTHO05D005504 2.8e-62 242.3 158 77.8
unitig_749.g13487 Utricularia gibba HOM05D004544 ORTHO05D005504 2.8e-62 242.3 158 74.1
Lsat_1_v5_gn_7_33840 Lactuca sativa HOM05D004544 ORTHO05D005504 4.8e-62 241.5 159 75.5
Sc03g0003850 Simmondsia chinensis HOM05D004544 ORTHO05D005504 1.4e-61 240.0 158 75.9
TAR633G0112 Trochodendron aralioides HOM05D004544 ORTHO05D005504 1.8e-61 239.6 158 76.6
TAR633G2617 Trochodendron aralioides HOM05D004544 ORTHO05D005504 1.8e-61 239.6 158 76.6
Aqoxy1G00422 Aquilegia oxysepala HOM05D004544 ORTHO05D005504 3.1e-61 238.8 158 74.7
vmacro22467 Vaccinium macrocarpon HOM05D004544 ORTHO05D005504 3.1e-61 238.8 174 71.3
Ciclev10031412m.g Citrus clementina HOM05D004544 ORTHO05D005504 5.3e-61 238.0 158 75.3
Dinv43503 Davidia involucrata HOM05D004544 ORTHO05D005504 5.3e-61 238.0 158 76.6
Thecc.08G193200 Theobroma cacao HOM05D004544 ORTHO05D005504 9.1e-61 237.3 158 75.3
AUR62041888 Chenopodium quinoa HOM05D004544 ORTHO05D005504 1.2e-60 236.9 158 75.3
HanXRQChr04g0117441 Helianthus annuus HOM05D004544 ORTHO05D005504 1.2e-60 236.9 158 69.6
AUR62035404 Chenopodium quinoa HOM05D004544 ORTHO05D005504 1.6e-60 236.5 158 75.3
ECA236G1315 Erigeron canadensis HOM05D004544 ORTHO05D005504 1.6e-60 236.5 158 72.2
Hma1.2p1_0128F.1_g059850 Hydrangea macrophylla HOM05D004544 ORTHO05D005504 1.6e-60 236.5 158 75.9
Nn2g15791 Nelumbo nucifera HOM05D004544 ORTHO05D005504 1.6e-60 236.5 158 75.3
DCAR_024995 Daucus carota HOM05D004544 ORTHO05D005504 2.0e-60 236.1 158 75.3
EL10Ac1g02232 Beta vulgaris HOM05D004544 ORTHO05D005504 3.5e-60 235.3 158 75.3
EL10Ac1g02233 Beta vulgaris HOM05D004544 ORTHO05D005504 3.5e-60 235.3 158 75.3
Cpa.g.c29747 Carica papaya HOM05D004544 ORTHO05D005504 3.5e-60 235.3 158 75.3
Nn7g35919 Nelumbo nucifera HOM05D004544 ORTHO05D005504 3.5e-60 235.3 158 75.3
MD02G1320400 Malus domestica HOM05D004544 ORTHO05D005504 4.5e-60 235.0 158 74.7
Eucgr.E04336 Eucalyptus grandis HOM05D004544 ORTHO05D005504 5.9e-60 234.6 158 74.7
Gohir.D08G037000 Gossypium hirsutum HOM05D004544 ORTHO05D005504 1.3e-59 233.4 158 74.1
Gorai.004G035000 Gossypium raimondii HOM05D004544 ORTHO05D005504 1.3e-59 233.4 158 74.1
Prupe.2G001700 Prunus persica HOM05D004544 ORTHO05D005504 3.8e-59 231.9 158 72.2
Carub.0005s2680 Capsella rubella HOM05D004544 ORTHO05D005504 8.5e-59 230.7 158 72.8
Duzib068G1099 Durio zibethinus HOM05D004544 ORTHO05D005504 1.1e-58 230.3 158 75.3
Phvul.005G042600 Phaseolus vulgaris HOM05D004544 ORTHO05D005504 1.9e-58 229.6 158 72.2
Manes.10G153000 Manihot esculenta HOM05D004544 ORTHO05D005504 2.5e-58 229.2 158 70.9
Thhalv10005961m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 3.2e-58 228.8 158 72.8
PSO170G0355 Papaver somniferum HOM05D004544 ORTHO05D005504 3.2e-58 228.8 158 70.9
Glyma.08G158600 Glycine max HOM05D004544 ORTHO05D005504 4.2e-58 228.4 158 72.8
RcHm_v2.0_Chr1g0313141 Rosa chinensis HOM05D004544 ORTHO05D005504 5.5e-58 228.0 158 72.2
TWI09G1596 Tripterygium wilfordii HOM05D004544 ORTHO05D005504 5.5e-58 228.0 158 70.3
VMungo1080G0174 Vigna mungo HOM05D004544 ORTHO05D005504 7.2e-58 227.6 158 70.9
FvH4_c5g00010 Fragaria vesca HOM05D004544 ORTHO05D005504 1.6e-57 226.5 158 70.9
FAN01G0284 Fragaria x ananassa HOM05D004544 ORTHO05D005504 1.6e-57 226.5 158 70.9
PSO063G0048 Papaver somniferum HOM05D004544 ORTHO05D005504 1.6e-57 226.5 158 70.3
Lalb_Chr25g0283741 Lupinus albus HOM05D004544 ORTHO05D005504 2.1e-57 226.1 158 73.4
Nn2g15790 Nelumbo nucifera HOM05D004544 ORTHO05D005504 3.6e-57 225.3 158 72.2
Atru.chr12.1432 Acer truncatum HOM05D004544 ORTHO05D005504 4.7e-57 224.9 158 71.5
AT3G60070 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 4.7e-57 224.9 158 71.5
AL5G42260 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 8.0e-57 224.2 158 71.5
Glyma.15G267700 Glycine max HOM05D004544 ORTHO05D005504 8.0e-57 224.2 158 71.5
CiPaw.13G000600 Carya illinoinensis HOM05D004544 ORTHO05D005504 1.0e-56 223.8 158 69.0
MBI01_g14445_MAGBIO Magnolia biondii HOM05D004544 ORTHO05D005504 1.0e-56 223.8 167 70.7
Sp5g03140 Schrenkiella parvula HOM05D004544 ORTHO05D005504 1.8e-56 223.0 158 70.9
CANSAT11G0055 Cannabis sativa HOM05D004544 ORTHO05D005504 5.2e-56 221.5 158 71.5
Medtr2g062270 Medicago truncatula HOM05D004544 ORTHO05D005504 5.2e-56 221.5 158 69.0
Cfa010700 Carpinus fangiana HOM05D004544 ORTHO05D005504 6.8e-56 221.1 158 71.5
CARHR139460 Cardamine hirsuta HOM05D004544 ORTHO05D005504 8.8e-56 220.7 158 67.7
Psat1g129360 Pisum sativum HOM05D004544 ORTHO05D005504 8.8e-56 220.7 158 70.3
Ca_03221_v3 Cicer arietinum L. HOM05D004544 ORTHO05D005504 1.2e-55 220.3 158 69.0
AT2G44280 Arabidopsis thaliana HOM05D004544 ORTHO05D005504 2.0e-55 219.5 158 67.7
Potri.009G024600 Populus trichocarpa HOM05D004544 ORTHO05D005504 2.0e-55 219.5 158 68.4
Carub.0004s2687 Capsella rubella HOM05D004544 ORTHO05D005504 2.6e-55 219.2 158 67.7
Sp4g26350 Schrenkiella parvula HOM05D004544 ORTHO05D005504 2.6e-55 219.2 158 67.7
AL4G43240 Arabidopsis lyrata HOM05D004544 ORTHO05D005504 3.4e-55 218.8 158 67.7
BcaC02g10108 Brassica carinata HOM05D004544 ORTHO05D005504 3.4e-55 218.8 159 70.4
A04p01890 Brassica napus HOM05D004544 ORTHO05D005504 3.4e-55 218.8 159 70.4
C04p32650 Brassica napus HOM05D004544 ORTHO05D005504 3.4e-55 218.8 159 70.4
BolC4t24833H Brassica oleracea HOM05D004544 ORTHO05D005504 3.4e-55 218.8 159 70.4
BraA04t15912Z Brassica rapa HOM05D004544 ORTHO05D005504 3.4e-55 218.8 159 70.4
Peaxi162Scf00402g00941 Petunia axillaris HOM05D004544 ORTHO05D005504 3.4e-55 218.8 141 78.0
PGR031G1320 Punica granatum HOM05D004544 ORTHO05D005504 4.4e-55 218.4 158 70.9
BcaNung06603 Brassica carinata HOM05D004544 ORTHO05D005504 5.7e-55 218.0 158 67.1
BolC4t22159H Brassica oleracea HOM05D004544 ORTHO05D005504 5.7e-55 218.0 158 67.1
Lj3g0003623 Lotus japonicus HOM05D004544 ORTHO05D005504 5.7e-55 218.0 158 70.3
A05p04480 Brassica napus HOM05D004544 ORTHO05D005504 7.5e-55 217.6 158 66.5
BraA05t19424Z Brassica rapa HOM05D004544 ORTHO05D005504 7.5e-55 217.6 158 66.5
TPR.G16160 Trifolium pratense HOM05D004544 ORTHO05D005504 7.5e-55 217.6 158 67.1
Aa31LG10G14230 Aethionema arabicum HOM05D004544 ORTHO05D005504 1.3e-54 216.9 158 68.4
BcaB02g08195 Brassica carinata HOM05D004544 ORTHO05D005504 1.3e-54 216.9 159 69.8
BcaB02g08807 Brassica carinata HOM05D004544 ORTHO05D005504 1.7e-54 216.5 158 66.5
THA.LOC104817137 Tarenaya hassleriana HOM05D004544 ORTHO05D005504 1.7e-54 216.5 160 70.0
PGSC0003DMG400031131 Solanum tuberosum HOM05D004544 ORTHO05D005504 2.8e-54 215.7 141 78.7
ATR0001G054 Amborella trichopoda HOM05D004544 ORTHO05D005504 3.7e-54 215.3 158 67.1
Potri.001G232100 Populus trichocarpa HOM05D004544 ORTHO05D005504 3.7e-54 215.3 158 68.4
A04p33250 Brassica napus HOM05D004544 ORTHO05D005504 1.1e-53 213.8 158 66.5
C04p70950 Brassica napus HOM05D004544 ORTHO05D005504 1.1e-53 213.8 158 66.5
BolC4t28598H Brassica oleracea HOM05D004544 ORTHO05D005504 1.1e-53 213.8 158 66.5
BraA04t18786Z Brassica rapa HOM05D004544 ORTHO05D005504 1.1e-53 213.8 158 66.5
Thhalv10001436m.g Eutrema salsugineum HOM05D004544 ORTHO05D005504 1.4e-53 213.4 158 67.7
C04p05190 Brassica napus HOM05D004544 ORTHO05D005504 1.8e-53 213.0 158 65.8
CsaV3_7G031530 Cucumis sativus L. HOM05D004544 ORTHO05D005504 1.2e-52 210.3 158 69.6
CDE04G3336 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 1.6e-52 209.9 158 67.1
arahy.Tifrunner.gnm1.ann1.HLF3VC Arachis hypogaea HOM05D004544 ORTHO05D005504 2.7e-52 209.1 186 60.8
arahy.Tifrunner.gnm1.ann1.ZSC88Q Arachis hypogaea HOM05D004544 ORTHO05D005504 2.7e-52 209.1 186 60.8
CDE05G1716 Ceratophyllum demersum HOM05D004544 ORTHO05D005504 2.7e-52 209.1 158 65.8
Nitab4.5_0000468g0180 Nicotiana tabacum HOM05D004544 ORTHO05D005504 1.3e-51 206.8 138 75.4
Sed0009480 Sechium edule HOM05D004544 ORTHO05D005504 2.2e-51 206.1 158 66.5
HPP92_012523 Vanilla planifolia HOM05D004544 ORTHO05D005504 2.9e-51 205.7 158 64.6
Zm00001eb325500 Zea mays HOM05D004544 ORTHO05D005504 2.9e-51 205.7 158 68.4
Os07g0578200 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 5.0e-51 204.9 158 66.5
QL04p001964 Quercus lobata HOM05D004544 ORTHO05D005504 3.2e-50 202.2 141 70.9
Os03g0168000 Oryza sativa ssp. japonica HOM05D004544 ORTHO05D005504 1.2e-49 200.3 158 61.4
Aa31LG1G25900 Aethionema arabicum HOM05D004544 ORTHO05D005504 3.6e-49 198.7 180 59.4
Nitab4.5_0004502g0040 Nicotiana tabacum HOM05D004544 ORTHO05D005504 3.6e-49 198.7 138 73.2
Gohir.A08G026600 Gossypium hirsutum HOM05D004544 ORTHO05D005504 1.8e-48 196.4 136 70.6
Zm00001eb402450 Zea mays HOM05D004544 ORTHO05D005504 3.0e-48 195.7 158 60.8
ClCG09G003650 Citrullus lanatus HOM05D004544 ORTHO05D005504 1.2e-47 193.7 200 55.0
Peaxi162Scf00402g00940 Petunia axillaris HOM05D004544 ORTHO05D005504 2.8e-46 189.1 158 60.8
Peaxi162Scf00245g00710 Petunia axillaris HOM05D004544 ORTHO05D005504 1.1e-45 187.2 158 62.7
CAN.G928.1 Capsicum annuum HOM05D004544 ORTHO05D005504 2.4e-45 186.0 158 62.0
Sopen10g026790 Solanum pennellii HOM05D004544 ORTHO05D005504 2.4e-45 186.0 158 61.4
BcaB06g29367 Brassica carinata HOM05D004544 ORTHO05D005504 7.0e-45 184.5 179 56.4
Atru.chr11.2714 Acer truncatum HOM05D004544 ORTHO05D005504 1.6e-44 183.3 146 67.1
CAN.G1361.4 Capsicum annuum HOM05D004544 ORTHO05D005504 5.9e-44 181.4 158 57.6
CARHR170380 Cardamine hirsuta HOM05D004544 ORTHO05D005504 5.9e-44 181.4 137 65.7
Pp3c17_11410 Physcomitrium patens HOM05D004544 ORTHO05D005504 3.8e-43 178.7 160 57.5
Haze_03276 Corylus avellana HOM05D004544 ORTHO05D005504 5.0e-43 178.3 158 62.7
AagrBONN_evm.TU.Sc2ySwM_368.1671 Anthoceros agrestis HOM05D004544 ORTHO05D005504 4.2e-42 175.3 158 55.7
SMO353G0186 Selaginella moellendorffii HOM05D004544 ORTHO05D005504 4.2e-42 175.3 158 58.9
PGSC0003DMG400028978 Solanum tuberosum HOM05D004544 ORTHO05D005504 9.5e-42 174.1 158 55.7
Mapoly0020s0019 Marchantia polymorpha HOM05D004544 ORTHO05D005504 2.1e-41 172.9 160 56.2
Solyc01g073670.3 Solanum lycopersicum HOM05D004544 ORTHO05D005504 3.6e-41 172.2 158 54.4
FAN01G3148 Fragaria x ananassa HOM05D004544 ORTHO05D005504 1.0e-40 170.6 158 58.2
Sopen01g033230 Solanum pennellii HOM05D004544 ORTHO05D005504 1.0e-40 170.6 158 54.4
Psat2g024040 Pisum sativum HOM05D004544 ORTHO05D005504 5.2e-40 168.3 139 61.9
MELO3C000237.2 Cucumis melo HOM05D004544 ORTHO05D005504 3.7e-38 162.2 121 68.6
SEGI_30614 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 3.7e-38 162.2 121 66.1
FAN01G0042 Fragaria x ananassa HOM05D004544 ORTHO05D005504 6.2e-33 144.8 156 52.6
FAN06G4582 Fragaria x ananassa HOM05D004544 ORTHO05D005504 1.4e-24 117.1 126 51.6
PGSC0003DMG400023279 Solanum tuberosum HOM05D004544 ORTHO05D005504 6.4e-22 108.2 158 44.3
PGSC0003DMG400007701 Solanum tuberosum HOM05D004544 ORTHO05D005504 1.0e-19 100.9 79 65.8
Sabra09G0016300 Salix brachista HOM05D004544 ORTHO05D005504 3.6e-17 92.4 158 42.4
CAN.G913.7 Capsicum annuum HOM05D004544 ORTHO05D005504 4.7e-17 92.0 63 71.4
Glyma.20G091501 Glycine max HOM05D004544 ORTHO05D005504 4.0e-16 89.0 60 71.7
Zm00001eb107640 Zea mays HOM05D004544 ORTHO05D005504 1.6e-09 67.0 57 63.2
Lj7A562T25 Lonicera japonica HOM05D004544 ORTHO05D005504 1.4e-08 63.9 61 62.3
SEGI_18579 Sequoiadendron giganteum HOM05D004544 ORTHO05D005504 3.8e-06 55.8 38 71.1


User provided reference genes

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