Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 2.7e-197 691.8 344 100.0
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 5.6e-139 498.0 346 73.1
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 6.2e-130 468.0 328 71.0
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 7.4e-123 444.5 341 66.6
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 2.5e-118 429.5 343 61.5
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 2.1e-117 426.4 344 60.8
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 2.1e-117 426.4 343 60.6
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.7e-117 426.0 341 61.0
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 4.6e-117 425.2 344 62.2
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 1.3e-116 423.7 343 60.9
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 1.8e-116 423.3 343 60.1
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 6.7e-116 421.4 341 61.9
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 3.3e-115 419.1 339 61.4
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 3.3e-115 419.1 344 59.6
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 7.4e-115 417.9 341 61.0
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 9.7e-115 417.5 344 60.8
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 1.3e-114 417.2 344 59.9
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 3.7e-114 415.6 347 59.9
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 3.7e-114 415.6 357 58.3
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.8e-114 415.2 345 60.0
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 4.1e-113 412.1 341 61.3
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 5.3e-113 411.8 342 58.8
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 6.9e-113 411.4 352 58.5
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 1.2e-112 410.6 343 59.5
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 1.5e-112 410.2 351 58.4
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 2.0e-112 409.8 341 59.8
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.2e-111 406.4 347 60.5
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 1.1e-110 404.1 347 58.2
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 1.1e-110 404.1 341 58.1
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 2.5e-110 402.9 347 58.8
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 3.2e-110 402.5 342 59.9
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 1.2e-109 400.6 341 58.7
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.6e-109 400.2 326 60.1
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.6e-109 400.2 326 60.1
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 2.1e-109 399.8 346 58.4
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 1.0e-108 397.5 365 57.5
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 1.0e-108 397.5 345 59.4
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 1.0e-108 397.5 346 58.1
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 1.8e-108 396.7 325 59.7
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 3.9e-108 395.6 348 57.5
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 3.9e-108 395.6 326 56.7
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 5.1e-108 395.2 346 57.5
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 5.1e-108 395.2 351 57.3
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 5.1e-108 395.2 343 58.6
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 2.0e-107 393.3 348 56.6
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 3.3e-107 392.5 318 62.3
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 4.3e-107 392.1 348 56.3
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 5.7e-107 391.7 347 57.9
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 7.4e-107 391.3 346 56.9
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.3e-106 390.6 348 56.3
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.3e-106 390.6 344 57.0
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 3.7e-106 389.0 344 57.6
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 6.3e-106 388.3 341 57.5
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 3.1e-105 386.0 343 56.6
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 9.1e-105 384.4 346 55.5
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 9.1e-105 384.4 348 57.2
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 2.0e-104 383.3 343 55.7
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 2.6e-104 382.9 346 55.2
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 3.4e-104 382.5 349 55.0
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 3.4e-104 382.5 349 55.0
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 3.4e-104 382.5 328 58.2
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 7.7e-104 381.3 349 57.0
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 1.7e-103 380.2 346 56.1
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.7e-103 380.2 332 56.6
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 3.8e-103 379.0 344 55.8
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.6e-101 372.5 347 57.3
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 4.7e-101 372.1 346 53.2
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 6.1e-101 371.7 363 51.2
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.4e-100 370.5 345 55.1
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 1.8e-100 370.2 349 54.7
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 2.3e-100 369.8 340 55.0
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 3.0e-100 369.4 373 51.5
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.0e-100 369.4 363 55.1
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 3.9e-100 369.0 349 53.9
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 8.8e-100 367.9 346 53.5
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 2.0e-99 366.7 345 54.5
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 3.3e-99 365.9 341 52.2
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 3.7e-98 362.5 311 60.8
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 3.7e-98 362.5 349 57.9
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 7.0e-97 358.2 377 50.4
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.0e-95 354.4 343 55.1
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.7e-95 353.6 340 53.8
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 2.2e-95 353.2 337 54.6
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 5.5e-94 348.6 273 61.9
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 4.7e-93 345.5 341 53.4
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 1.1e-91 340.9 330 51.5
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 2.4e-89 333.2 258 64.3
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 1.2e-88 330.9 320 54.4
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 1.6e-88 330.5 272 62.9
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.5e-88 328.9 252 65.1
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 2.9e-87 326.2 326 50.6
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 6.1e-85 318.5 339 47.8
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 7.5e-83 311.6 302 55.3
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 3.7e-82 309.3 340 48.5
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 5.9e-80 302.0 309 51.8
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.0e-76 289.7 279 56.3
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 3.7e-74 282.7 262 55.7
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 2.4e-73 280.0 352 44.6
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.2e-69 267.7 241 56.0
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 4.0e-68 262.7 258 51.6
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 1.2e-64 251.1 308 47.1
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 2.7e-64 250.0 234 51.3
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 2.1e-61 240.4 351 38.5
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.6e-59 233.4 189 60.3
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 2.2e-58 230.3 183 57.9
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 8.3e-58 228.4 215 56.7
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 6.2e-53 212.2 243 49.8
Eucgr.L03457 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.2e-40 171.4 128 59.4
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 8.9e-36 155.2 307 34.2
SEGI_12556 Sequoiadendron giganteum HOM05D006965 ORTHO05D008652 2.0e-35 154.1 126 59.5
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 3.4e-35 153.3 140 55.0
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 2.1e-29 134.0 213 34.7
Haze_10414 Corylus avellana HOM05D006965 ORTHO05D008652 2.0e-27 127.5 100 61.0
Cpa.g.sc189.20 Carica papaya HOM05D006965 ORTHO05D008652 1.2e-16 91.7 71 59.2
TPR.G14363 Trifolium pratense HOM05D006965 ORTHO05D008652 1.1e-12 78.6 103 45.6
Cpa.g.sc189.19 Carica papaya HOM05D006965 ORTHO05D008652 2.7e-08 63.9 84 50.0


User provided reference genes

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