Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01343 Erythranthe guttata HOM05D005285 ORTHO05D006829 1.8e-215 752.3 364 100.0
SalBow5G3096 Salvia bowleyana HOM05D005285 ORTHO05D006829 1.1e-188 663.3 364 86.5
SalBow5G3836 Salvia bowleyana HOM05D005285 ORTHO05D006829 3.1e-188 661.8 364 86.3
MSTRG.20606 Avicennia marina HOM05D005285 ORTHO05D006829 2.2e-186 655.6 364 86.8
Oeu064272.1 Olea europaea HOM05D005285 ORTHO05D006829 8.2e-181 637.1 361 83.9
Dinv09380 Davidia involucrata HOM05D005285 ORTHO05D006829 9.1e-180 633.6 364 83.2
Actinidia20684 Actinidia chinensis HOM05D005285 ORTHO05D006829 3.4e-179 631.7 362 83.1
Peaxi162Scf00042g00510 Petunia axillaris HOM05D005285 ORTHO05D006829 3.4e-179 631.7 360 83.6
SGA_v2.0_scaffold646G53323 Striga asiatica HOM05D005285 ORTHO05D006829 4.5e-179 631.3 358 84.6
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 1.7e-178 629.4 362 82.9
Lj9A629T99 Lonicera japonica HOM05D005285 ORTHO05D006829 1.4e-177 626.3 361 82.5
GSVIVG01032048001 Vitis vinifera HOM05D005285 ORTHO05D006829 1.9e-177 625.9 364 81.9
CSS0013341 Camellia sinensis var. sinensis HOM05D005285 ORTHO05D006829 2.7e-176 622.1 363 82.6
Gohir.A08G026900 Gossypium hirsutum HOM05D005285 ORTHO05D006829 4.7e-176 621.3 363 82.9
Cc02_g27470 Coffea canephora HOM05D005285 ORTHO05D006829 8.0e-176 620.5 362 82.9
Gorai.004G035700 Gossypium raimondii HOM05D005285 ORTHO05D006829 3.0e-175 618.6 364 82.7
Gohir.D08G037700 Gossypium hirsutum HOM05D005285 ORTHO05D006829 5.2e-175 617.8 364 82.7
Thecc.01G414500 Theobroma cacao HOM05D005285 ORTHO05D006829 5.2e-175 617.8 362 82.6
Nitab4.5_0002012g0040 Nicotiana tabacum HOM05D005285 ORTHO05D006829 5.7e-174 614.4 358 81.8
Rhsim01G0131200 Rhododendron simsii HOM05D005285 ORTHO05D006829 7.4e-174 614.0 369 80.2
PGR044G0372 Punica granatum HOM05D005285 ORTHO05D006829 2.2e-173 612.5 365 80.3
Duzib268G1126 Durio zibethinus HOM05D005285 ORTHO05D006829 2.8e-173 612.1 360 82.8
unitig_26.g9596 Utricularia gibba HOM05D005285 ORTHO05D006829 2.8e-173 612.1 359 80.8
Sed0014745 Sechium edule HOM05D005285 ORTHO05D006829 1.1e-172 610.1 361 79.8
ClCG10G012540 Citrullus lanatus HOM05D005285 ORTHO05D006829 1.8e-172 609.4 361 80.1
Sopen10g011740 Solanum pennellii HOM05D005285 ORTHO05D006829 2.4e-172 609.0 360 80.8
TAR636G1692 Trochodendron aralioides HOM05D005285 ORTHO05D006829 3.1e-172 608.6 362 80.4
Potri.001G271100 Populus trichocarpa HOM05D005285 ORTHO05D006829 4.1e-172 608.2 368 80.7
Nitab4.5_0000050g0030 Nicotiana tabacum HOM05D005285 ORTHO05D006829 9.1e-172 607.1 356 81.2
Ciclev10031943m.g Citrus clementina HOM05D005285 ORTHO05D006829 2.0e-171 605.9 362 80.1
FAN03G1002 Fragaria x ananassa HOM05D005285 ORTHO05D006829 2.0e-171 605.9 360 80.3
Hma1.2p1_1011F.1_g247500 Hydrangea macrophylla HOM05D005285 ORTHO05D006829 2.0e-171 605.9 390 76.4
QL04p004838 Quercus lobata HOM05D005285 ORTHO05D006829 2.6e-171 605.5 359 79.9
Nn7g36086 Nelumbo nucifera HOM05D005285 ORTHO05D006829 5.9e-171 604.4 363 79.3
FvH4_7g00610 Fragaria vesca HOM05D005285 ORTHO05D006829 1.0e-170 603.6 360 80.3
FAN06G0391 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.0e-170 603.6 360 80.3
Cpa.g.sc234.2 Carica papaya HOM05D005285 ORTHO05D006829 1.3e-170 603.2 365 79.2
Eucgr.J01257 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.7e-170 602.8 366 77.9
FAN10G3755 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.7e-170 602.8 360 80.3
Lsat_1_v5_gn_1_109141 Lactuca sativa HOM05D005285 ORTHO05D006829 2.2e-170 602.4 362 79.3
CsaV3_3G032330 Cucumis sativus L. HOM05D005285 ORTHO05D006829 2.9e-170 602.1 364 78.8
TWI09G0675 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 2.9e-170 602.1 363 79.1
DCAR_029637 Daucus carota HOM05D005285 ORTHO05D006829 3.8e-170 601.7 360 78.9
Haze_03242 Corylus avellana HOM05D005285 ORTHO05D006829 5.0e-170 601.3 362 80.1
THA.LOC104819060 Tarenaya hassleriana HOM05D005285 ORTHO05D006829 1.1e-169 600.1 360 78.1
FAN01G1197 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.5e-169 599.7 360 79.7
RcHm_v2.0_Chr1g0314801 Rosa chinensis HOM05D005285 ORTHO05D006829 1.9e-169 599.4 360 80.0
EL10Ac2g04308 Beta vulgaris HOM05D005285 ORTHO05D006829 2.5e-169 599.0 360 79.2
Cfa010729 Carpinus fangiana HOM05D005285 ORTHO05D006829 5.5e-169 597.8 362 79.8
MELO3C023957.2 Cucumis melo HOM05D005285 ORTHO05D006829 7.2e-169 597.4 364 78.8
SGA_v2.0_scaffold646G53324 Striga asiatica HOM05D005285 ORTHO05D006829 9.4e-169 597.0 455 65.3
Aa31LG11G7560 Aethionema arabicum HOM05D005285 ORTHO05D006829 2.1e-168 595.9 360 78.1
AUR62023050 Chenopodium quinoa HOM05D005285 ORTHO05D006829 2.1e-168 595.9 362 79.6
ECA248G0026 Erigeron canadensis HOM05D005285 ORTHO05D006829 6.1e-168 594.3 361 77.6
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 1.4e-167 593.2 368 79.1
Aqoxy2G00109 Aquilegia oxysepala HOM05D005285 ORTHO05D006829 2.3e-167 592.4 360 76.7
TWI53G0546 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 3.0e-167 592.0 362 77.3
CANSAT21G0587 Cannabis sativa HOM05D005285 ORTHO05D006829 4.0e-167 591.7 362 78.2
Manes.10G147800 Manihot esculenta HOM05D005285 ORTHO05D006829 4.0e-167 591.7 369 77.5
MBI04_g14265_MAGBIO Magnolia biondii HOM05D005285 ORTHO05D006829 1.2e-166 590.1 362 78.5
MD07G1005600 Malus domestica HOM05D005285 ORTHO05D006829 1.5e-166 589.7 359 79.4
PSO339G1127 Papaver somniferum HOM05D005285 ORTHO05D006829 7.5e-166 587.4 369 75.9
MD02G1316300 Malus domestica HOM05D005285 ORTHO05D006829 9.7e-166 587.0 359 78.8
AL8G20280 Arabidopsis lyrata HOM05D005285 ORTHO05D006829 2.2e-165 585.9 360 77.5
Hund03676 Selenicereus undatus HOM05D005285 ORTHO05D006829 2.2e-165 585.9 356 79.2
Thhalv10004473m.g Eutrema salsugineum HOM05D005285 ORTHO05D006829 4.8e-165 584.7 360 76.9
Sp2g18470 Schrenkiella parvula HOM05D005285 ORTHO05D006829 4.8e-165 584.7 357 77.3
AT5G48020 Arabidopsis thaliana HOM05D005285 ORTHO05D006829 1.8e-164 582.8 362 76.0
A06p39410 Brassica napus HOM05D005285 ORTHO05D006829 5.3e-164 581.3 362 76.2
BraA06t26856Z Brassica rapa HOM05D005285 ORTHO05D006829 5.3e-164 581.3 362 76.2
Carub.0008s0757 Capsella rubella HOM05D005285 ORTHO05D006829 7.0e-164 580.9 360 76.7
Hund03675 Selenicereus undatus HOM05D005285 ORTHO05D006829 7.0e-164 580.9 389 73.3
BcaC06g30830 Brassica carinata HOM05D005285 ORTHO05D006829 9.1e-164 580.5 362 76.0
Eucgr.J01254 Eucalyptus grandis HOM05D005285 ORTHO05D006829 9.1e-164 580.5 366 74.3
Eucgr.J01253 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.2e-163 580.1 366 74.0
Eucgr.J01256 Eucalyptus grandis HOM05D005285 ORTHO05D006829 1.2e-163 580.1 366 74.0
Glyma.12G239400 Glycine max HOM05D005285 ORTHO05D006829 2.7e-163 578.9 359 77.2
PSO384G1382 Papaver somniferum HOM05D005285 ORTHO05D006829 2.7e-163 578.9 369 74.8
Lalb_Chr03g0033921 Lupinus albus HOM05D005285 ORTHO05D006829 7.7e-163 577.4 359 75.5
Phvul.011G213800 Phaseolus vulgaris HOM05D005285 ORTHO05D006829 1.3e-162 576.6 359 76.6
arahy.Tifrunner.gnm1.ann1.DICK3U Arachis hypogaea HOM05D005285 ORTHO05D006829 2.2e-162 575.9 359 75.8
Lj3g0011351 Lotus japonicus HOM05D005285 ORTHO05D006829 2.2e-162 575.9 359 75.5
BolC7t44405H Brassica oleracea HOM05D005285 ORTHO05D006829 1.1e-161 573.5 362 75.1
CARHR184290 Cardamine hirsuta HOM05D005285 ORTHO05D006829 1.1e-161 573.5 360 74.7
VMungo1127G2059 Vigna mungo HOM05D005285 ORTHO05D006829 1.1e-161 573.5 359 76.9
CDE04G1667 Ceratophyllum demersum HOM05D005285 ORTHO05D006829 1.5e-161 573.2 365 73.7
C07p38860 Brassica napus HOM05D005285 ORTHO05D006829 4.2e-161 571.6 362 75.1
vmacro21170 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 2.7e-160 568.9 416 69.5
Sabra16G0166500 Salix brachista HOM05D005285 ORTHO05D006829 6.1e-160 567.8 439 67.7
Psat4g195080 Pisum sativum HOM05D005285 ORTHO05D006829 2.3e-159 565.8 357 75.4
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.5e-158 563.1 452 63.7
Medtr8g036165 Medicago truncatula HOM05D005285 ORTHO05D006829 2.0e-158 562.8 359 74.7
Zm00001eb189240 Zea mays HOM05D005285 ORTHO05D006829 2.0e-158 562.8 358 74.9
Lj9C629T1 Lonicera japonica HOM05D005285 ORTHO05D006829 1.3e-157 560.1 354 75.1
Ca_23856_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 2.2e-157 559.3 359 74.4
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 2.8e-157 558.9 333 80.8
Os02g0717500 Oryza sativa ssp. japonica HOM05D005285 ORTHO05D006829 4.8e-157 558.1 360 74.2
ATR0605G013 Amborella trichopoda HOM05D005285 ORTHO05D006829 1.8e-156 556.2 366 72.7
SEGI_06931 Sequoiadendron giganteum HOM05D005285 ORTHO05D006829 1.2e-152 543.5 378 68.0
Lsat_1_v5_gn_1_111020 Lactuca sativa HOM05D005285 ORTHO05D006829 2.4e-148 529.3 361 69.5
Atru.chr11.2010 Acer truncatum HOM05D005285 ORTHO05D006829 5.4e-148 528.1 353 72.0
ECA248G2079 Erigeron canadensis HOM05D005285 ORTHO05D006829 4.5e-147 525.0 361 69.8
ECA248G2524 Erigeron canadensis HOM05D005285 ORTHO05D006829 7.8e-147 524.2 365 68.8
HanXRQChr11g0330581 Helianthus annuus HOM05D005285 ORTHO05D006829 7.8e-147 524.2 361 69.8
QL04p004878 Quercus lobata HOM05D005285 ORTHO05D006829 1.2e-144 516.9 360 67.5
AagrBONN_evm.TU.Sc2ySwM_228.3236 Anthoceros agrestis HOM05D005285 ORTHO05D006829 1.6e-144 516.5 362 65.5
QL04p004868 Quercus lobata HOM05D005285 ORTHO05D006829 2.6e-142 509.2 360 65.8
HanXRQChr11g0330561 Helianthus annuus HOM05D005285 ORTHO05D006829 4.4e-142 508.4 360 68.1
Atru.chr11.2632 Acer truncatum HOM05D005285 ORTHO05D006829 7.5e-142 507.7 388 68.3
QL04p004849 Quercus lobata HOM05D005285 ORTHO05D006829 4.6e-139 498.4 362 63.5
SMO364G0792 Selaginella moellendorffii HOM05D005285 ORTHO05D006829 1.3e-138 496.9 356 64.3
Mapoly0019s0106 Marchantia polymorpha HOM05D005285 ORTHO05D006829 3.0e-138 495.7 359 64.3
Prupe.2G008000 Prunus persica HOM05D005285 ORTHO05D006829 1.2e-136 490.3 274 85.0
SHI04065 Sapria himalayana HOM05D000259 ORTHO05D000155 2.6e-134 482.6 520 51.2
Pp3c17_23530 Physcomitrium patens HOM05D005285 ORTHO05D006829 1.7e-125 453.4 385 56.9
Prupe.2G008200 Prunus persica HOM05D005285 ORTHO05D006829 2.2e-125 453.0 255 83.5
Sc11g0009350 Simmondsia chinensis HOM05D005285 ORTHO05D006829 2.2e-125 453.0 271 80.8
Sed0008744 Sechium edule HOM05D005285 ORTHO05D006829 3.2e-124 449.1 344 66.9
HPP92_022786 Vanilla planifolia HOM05D005285 ORTHO05D006829 7.6e-118 427.9 274 74.8
Cre13.g586400 Chlamydomonas reinhardtii HOM05D005285 ORTHO05D006829 3.9e-106 389.0 387 51.2
Lsat_1_v5_gn_1_72821 Lactuca sativa HOM05D005285 ORTHO05D006829 8.7e-106 387.9 351 56.4
Ca_24082_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 3.4e-102 375.9 348 53.2
Pp3c14_26250 Physcomitrium patens HOM05D005285 ORTHO05D006829 1.6e-99 367.1 237 69.2
Solyc10g037950.2 Solanum lycopersicum HOM05D005285 ORTHO05D006829 1.1e-87 327.8 200 77.0
HanXRQChr11g0330591 Helianthus annuus HOM05D005285 ORTHO05D006829 1.2e-83 314.3 224 67.9
arahy.Tifrunner.gnm1.ann1.A7HRCY Arachis hypogaea HOM05D005285 ORTHO05D006829 8.7e-82 308.1 271 59.4
Solyc10g037960.3 Solanum lycopersicum HOM05D005285 ORTHO05D006829 5.5e-76 288.9 162 84.6
TPR.G21737 Trifolium pratense HOM05D005285 ORTHO05D006829 6.1e-75 285.4 164 81.7
Eucgr.L03705 Eucalyptus grandis HOM05D005285 ORTHO05D006829 8.8e-74 281.6 181 74.6
HanXRQChr01g0017351 Helianthus annuus HOM05D005285 ORTHO05D006829 3.3e-73 279.6 179 72.6
TPR.G21746 Trifolium pratense HOM05D005285 ORTHO05D006829 1.3e-69 267.7 183 69.4
Ca_24079_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 1.4e-63 247.7 352 41.8
Cpa.g.sc2760.1 Carica papaya HOM05D005285 ORTHO05D006829 5.2e-58 229.2 175 60.6
Rhsim06G0016300 Rhododendron simsii HOM05D005285 ORTHO05D006829 7.7e-54 215.3 118 87.3
Peaxi162Scf00451g00621 Petunia axillaris HOM05D005285 ORTHO05D006829 2.4e-47 193.7 170 60.0
HanXRQChr11g0330601 Helianthus annuus HOM05D005285 ORTHO05D006829 6.8e-42 175.6 106 74.5
Actinidia21565 Actinidia chinensis HOM05D005285 ORTHO05D006829 1.3e-37 161.4 107 74.8
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 1.9e-36 157.5 94 79.8
Oeu039101.1 Olea europaea HOM05D000288 ORTHO05D000173 1.0e-29 135.2 88 73.9
Atru.ctg794.7 Acer truncatum HOM05D005285 ORTHO05D037890 1.5e-25 121.3 177 41.8
CDE07G0090 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 2.5e-20 104.0 232 31.5
vmacro21176 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 3.3e-20 103.6 112 53.6
TPR.G13313 Trifolium pratense HOM05D005285 ORTHO05D413460 1.8e-18 97.8 77 58.4
Atru.chr13.2215 Acer truncatum HOM05D005285 ORTHO05D037890 2.0e-17 94.4 55 74.5
arahy.Tifrunner.gnm1.ann1.J91U4H Arachis hypogaea HOM05D000001 ORTHO05D004533 3.7e-16 90.1 62 62.9
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 1.4e-15 88.2 83 56.6
VMungo1127G1344 Vigna mungo HOM05D000839 ORTHO05D000664 3.5e-14 83.6 70 64.3
arahy.Tifrunner.gnm1.ann1.43BKZS Arachis hypogaea HOM05D000001 ORTHO05D000003 1.5e-12 78.2 47 70.2
TPR.G1074 Trifolium pratense HOM05D005285 ORTHO05D411165 5.4e-07 59.7 74 43.2
Lsat_1_v5_gn_9_64201 Lactuca sativa HOM05D000310 ORTHO05D005377 2.7e-06 57.4 32 81.2
QL11p040202 Quercus lobata HOM05D000018 ORTHO05D001172 4.6e-06 56.6 349 22.3
QL11p038890 Quercus lobata HOM05D000018 ORTHO05D001172 6.0e-06 56.2 349 21.8


User provided reference genes

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