Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 1.3e-124 449.9 245 100.0
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 7.4e-93 344.4 246 77.2
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 9.7e-93 344.0 245 75.5
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 4.1e-91 338.6 244 73.8
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.5e-90 336.7 251 74.1
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 2.5e-88 329.3 246 68.3
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 4.2e-88 328.6 244 71.3
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 5.5e-88 328.2 246 74.4
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 5.5e-88 328.2 247 77.3
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 4.6e-87 325.1 248 70.6
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 6.1e-87 324.7 248 74.2
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 1.4e-86 323.6 249 73.5
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 3.9e-86 322.0 244 70.5
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 6.7e-86 321.2 245 66.9
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 6.7e-86 321.2 244 69.7
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 1.1e-85 320.5 240 72.5
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.0e-85 319.7 247 74.1
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 2.0e-85 319.7 241 72.2
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 4.4e-85 318.5 245 73.9
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 4.4e-85 318.5 248 73.4
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 5.7e-85 318.2 245 66.9
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 5.7e-85 318.2 253 71.5
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 7.4e-85 317.8 188 83.0
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 9.7e-85 317.4 247 72.5
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 4.8e-84 315.1 247 71.3
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 8.2e-84 314.3 199 78.4
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 1.1e-83 313.9 246 69.1
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.1e-83 313.9 245 73.9
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.4e-83 312.8 218 75.2
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 9.1e-83 310.8 245 72.7
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.5e-82 310.1 245 70.6
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 1.5e-82 310.1 242 71.9
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 2.6e-82 309.3 245 65.3
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 2.6e-82 309.3 208 76.0
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 3.4e-82 308.9 248 65.7
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 4.5e-82 308.5 252 68.3
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 4.5e-82 308.5 244 64.8
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 4.5e-82 308.5 246 67.9
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 7.7e-82 307.8 187 80.2
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 1.3e-81 307.0 250 64.8
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 2.9e-81 305.8 244 68.4
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 3.8e-81 305.4 215 76.3
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 5.0e-81 305.1 247 66.4
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 6.5e-81 304.7 175 82.9
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 6.5e-81 304.7 217 73.3
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 1.1e-80 303.9 187 76.5
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.1e-80 303.9 169 84.0
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 1.4e-80 303.5 238 68.9
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.4e-80 303.5 188 78.2
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 1.4e-80 303.5 186 78.0
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 1.4e-80 303.5 248 71.4
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 2.5e-80 302.8 249 64.7
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 2.5e-80 302.8 247 71.3
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 4.2e-80 302.0 249 68.3
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 4.2e-80 302.0 244 65.2
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 7.2e-80 301.2 239 71.5
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 9.4e-80 300.8 244 70.1
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 9.4e-80 300.8 187 79.7
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 2.7e-79 299.3 248 63.7
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 6.1e-79 298.1 244 65.2
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 6.1e-79 298.1 171 81.3
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 1.0e-78 297.4 209 70.3
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.8e-78 296.6 238 68.5
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 3.0e-78 295.8 199 72.4
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 3.0e-78 295.8 200 72.0
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 3.0e-78 295.8 200 72.0
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 3.0e-78 295.8 209 69.4
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 3.0e-78 295.8 244 66.4
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 8.8e-78 294.3 179 77.1
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 8.8e-78 294.3 246 66.3
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 1.5e-77 293.5 171 81.3
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 2.0e-77 293.1 225 70.7
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 3.3e-77 292.4 246 69.9
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 3.3e-77 292.4 196 71.4
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 1.3e-76 290.4 245 63.3
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.3e-76 290.4 246 63.8
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 2.2e-76 289.7 258 63.6
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 2.2e-76 289.7 258 63.6
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 1.4e-75 287.0 186 74.7
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 1.6e-74 283.5 250 65.2
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 2.6e-74 282.7 253 65.2
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 5.9e-74 281.6 181 75.7
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 8.5e-73 277.7 248 58.9
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 3.2e-72 275.8 247 60.7
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 4.7e-71 271.9 246 62.2
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 6.1e-71 271.6 226 63.3
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 4.4e-69 265.4 186 69.9
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.3e-68 263.8 245 58.8
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 3.7e-68 262.3 186 66.1
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 5.3e-67 258.5 150 79.3
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 7.0e-67 258.1 187 66.8
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 3.5e-66 255.8 227 62.6
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 3.5e-66 255.8 244 57.4
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 3.5e-66 255.8 245 60.8
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 3.5e-66 255.8 245 60.8
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 8.5e-65 251.1 243 56.8
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 8.5e-65 251.1 180 67.2
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 3.2e-64 249.2 170 72.4
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 1.2e-63 247.3 208 66.8
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 2.3e-62 243.0 182 61.5
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 2.3e-62 243.0 182 61.5
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 3.1e-59 232.6 138 77.5
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 7.0e-59 231.5 169 65.7
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 9.1e-59 231.1 184 61.4
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 2.7e-58 229.6 176 61.4
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 5.9e-58 228.4 202 71.8
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 2.9e-57 226.1 183 61.2
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 3.2e-56 222.6 132 78.8
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 1.4e-46 190.7 120 74.2
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 2.0e-45 186.8 124 70.2
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 5.9e-42 175.3 124 70.2
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 1.7e-36 157.1 105 73.3
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 3.5e-26 122.9 181 39.2
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 1.6e-23 114.0 173 34.7
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.4e-22 110.9 79 67.1
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 1.1e-16 91.3 187 34.8
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 3.3e-08 63.2 55 56.4
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 6.9e-06 55.5 152 25.7


User provided reference genes

Program Settings