Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 1.4e-55 219.2 95 100.0
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 2.1e-43 178.7 88 85.2
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 2.7e-43 178.3 88 85.2
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 3.6e-43 177.9 92 81.5
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 3.6e-43 177.9 88 85.2
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 4.6e-43 177.6 88 86.4
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 6.1e-43 177.2 88 86.4
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 1.0e-42 176.4 88 85.2
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 1.4e-42 176.0 88 84.1
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 1.4e-42 176.0 88 84.1
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 1.8e-42 175.6 88 85.2
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 3.0e-42 174.9 88 83.0
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 3.0e-42 174.9 88 83.0
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 3.0e-42 174.9 87 85.1
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 3.0e-42 174.9 88 84.1
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 3.9e-42 174.5 88 85.2
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 3.9e-42 174.5 88 84.1
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 6.7e-42 173.7 88 83.0
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 6.7e-42 173.7 88 84.1
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 6.7e-42 173.7 92 78.3
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 6.7e-42 173.7 88 84.1
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 1.5e-41 172.6 88 81.8
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 1.5e-41 172.6 88 80.7
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 1.5e-41 172.6 88 79.5
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 2.6e-41 171.8 88 79.5
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 4.4e-41 171.0 88 80.7
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 5.7e-41 170.6 88 81.8
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 5.7e-41 170.6 88 81.8
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 7.4e-41 170.2 89 82.0
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 7.4e-41 170.2 88 83.0
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 7.4e-41 170.2 88 83.0
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 9.7e-41 169.9 88 80.7
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 1.3e-40 169.5 88 81.8
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 2.2e-40 168.7 88 80.7
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 3.7e-40 167.9 88 80.7
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 4.8e-40 167.5 88 78.4
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 4.8e-40 167.5 86 82.6
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 6.3e-40 167.2 94 75.5
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 8.2e-40 166.8 89 80.9
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 8.2e-40 166.8 88 73.9
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 1.1e-39 166.4 88 79.5
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 1.4e-39 166.0 88 79.5
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.4e-39 166.0 89 80.9
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 1.8e-39 165.6 88 78.4
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 1.8e-39 165.6 88 78.4
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 1.8e-39 165.6 88 77.3
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 2.4e-39 165.2 88 79.5
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 3.1e-39 164.9 88 77.3
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 4.1e-39 164.5 88 77.3
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 6.9e-39 163.7 88 78.4
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 1.2e-38 162.9 88 78.4
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 1.5e-38 162.5 86 80.2
CDE05G1162 Ceratophyllum demersum HOM05D008019 ORTHO05D010184 2.6e-38 161.8 88 76.1
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 2.6e-38 161.8 88 76.1
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 3.4e-38 161.4 88 76.1
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 4.5e-38 161.0 88 76.1
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 2.2e-37 158.7 88 76.1
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 3.8e-37 157.9 88 71.6
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 6.5e-37 157.1 95 71.6
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 9.4e-36 153.3 77 83.1
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.2e-35 152.9 87 75.9
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 1.6e-35 152.5 77 81.8
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 4.7e-35 151.0 88 69.3
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 3.0e-34 148.3 76 82.9
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 1.1e-33 146.4 136 52.9
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 5.7e-33 144.1 88 69.3
Sed0006336 Sechium edule HOM05D008019 ORTHO05D010184 8.2e-32 140.2 88 69.3
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 1.8e-23 112.5 58 82.8
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 5.3e-23 110.9 57 77.2
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 9.1e-23 110.2 57 75.4
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 9.8e-17 90.1 51 68.6
Gohir.D12G096933 Gossypium hirsutum HOM05D008019 ORTHO05D010184 2.7e-14 82.0 40 85.0
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.2e-06 56.6 38 57.9


User provided reference genes

Program Settings