Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01286 Erythranthe guttata HOM05D007963 ORTHO05D009967 1.2e-64 249.6 121 100.0
MSTRG.20574 Avicennia marina HOM05D007963 ORTHO05D009967 1.3e-26 123.2 119 54.6
SalBow5G1437 Salvia bowleyana HOM05D007963 ORTHO05D009967 1.9e-25 119.4 121 56.2
SalBow5G4167 Salvia bowleyana HOM05D007963 ORTHO05D009967 1.9e-25 119.4 121 56.2
SGA_v2.0_scaffold4G02518 Striga asiatica HOM05D007963 ORTHO05D009967 8.0e-24 114.0 119 55.5
TAR369G0233 Trochodendron aralioides HOM05D007963 ORTHO05D009967 1.4e-23 113.2 115 55.7
Lsat_1_v5_gn_1_105740 Lactuca sativa HOM05D007963 ORTHO05D009967 4.4e-22 108.2 122 50.8
Nn2g15279 Nelumbo nucifera HOM05D007963 ORTHO05D009967 4.4e-22 108.2 120 49.2
QL04p008099 Quercus lobata HOM05D007963 ORTHO05D009967 9.8e-22 107.1 119 51.3
QL04p008549 Quercus lobata HOM05D007963 ORTHO05D009967 9.8e-22 107.1 119 51.3
HanXRQChr01g0016481 Helianthus annuus HOM05D007963 ORTHO05D009967 1.9e-20 102.8 122 48.4
MBI04_g34432_MAGBIO Magnolia biondii HOM05D007963 ORTHO05D009967 2.4e-20 102.4 120 47.5
Sopen10g031160 Solanum pennellii HOM05D007963 ORTHO05D009967 3.2e-20 102.1 87 60.9
Potri.009G059100 Populus trichocarpa HOM05D007963 ORTHO05D009967 4.1e-20 101.7 113 53.1
PGSC0003DMG400023738 Solanum tuberosum HOM05D007963 ORTHO05D009967 4.1e-20 101.7 110 53.6
CiPaw.14G001400 Carya illinoinensis HOM05D007963 ORTHO05D009967 5.4e-20 101.3 82 61.0
Thecc.01G408600 Theobroma cacao HOM05D007963 ORTHO05D009967 7.0e-20 100.9 102 56.9
CiPaw.13G006800 Carya illinoinensis HOM05D007963 ORTHO05D009967 1.6e-19 99.8 120 49.2
Duzib133G0999 Durio zibethinus HOM05D007963 ORTHO05D009967 2.7e-19 99.0 94 56.4
unitig_61.g26362 Utricularia gibba HOM05D007963 ORTHO05D009967 3.5e-19 98.6 117 46.2
vmacro13678 Vaccinium macrocarpon HOM05D007963 ORTHO05D009967 6.0e-19 97.8 94 56.4
Hma1.2p1_2160F.1_g315600 Hydrangea macrophylla HOM05D007963 ORTHO05D009967 7.8e-19 97.4 76 60.5
ClCG10G012280 Citrullus lanatus HOM05D007963 ORTHO05D009967 1.0e-18 97.1 97 54.6
Manes.07G007300 Manihot esculenta HOM05D007963 ORTHO05D009967 1.3e-18 96.7 96 52.1
Sc23g0005920 Simmondsia chinensis HOM05D007963 ORTHO05D009967 1.3e-18 96.7 124 44.4
CSS0005909 Camellia sinensis var. sinensis HOM05D007963 ORTHO05D009967 1.7e-18 96.3 100 51.0
MD02G1308200 Malus domestica HOM05D007963 ORTHO05D009967 5.0e-18 94.7 89 56.2
Cfa010795 Carpinus fangiana HOM05D007963 ORTHO05D009967 6.6e-18 94.4 121 50.4
DCAR_003219 Daucus carota HOM05D007963 ORTHO05D009967 1.1e-17 93.6 96 51.0
Haze_03176 Corylus avellana HOM05D007963 ORTHO05D009967 1.5e-17 93.2 127 47.2
COL.COLO4_04871 Corchorus olitorius HOM05D007963 ORTHO05D009967 1.9e-17 92.8 93 58.1
Eucgr.J01210 Eucalyptus grandis HOM05D007963 ORTHO05D009967 2.5e-17 92.4 97 47.4
Gohir.A08G143400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 2.5e-17 92.4 58 69.0
Gorai.004G171400 Gossypium raimondii HOM05D007963 ORTHO05D009967 2.5e-17 92.4 58 69.0
FvH4_5g32100 Fragaria vesca HOM05D007963 ORTHO05D009967 3.3e-17 92.0 125 42.4
MELO3C023985.2 Cucumis melo HOM05D007963 ORTHO05D009967 4.3e-17 91.7 93 53.8
CsaV3_3G032070 Cucumis sativus L. HOM05D007963 ORTHO05D009967 4.3e-17 91.7 93 52.7
Rhsim07G0056600 Rhododendron simsii HOM05D007963 ORTHO05D009967 5.6e-17 91.3 107 49.5
RcHm_v2.0_Chr7g0228141 Rosa chinensis HOM05D007963 ORTHO05D009967 5.6e-17 91.3 130 43.1
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 7.3e-17 90.9 74 56.8
Gohir.D08G164400 Gossypium hirsutum HOM05D007963 ORTHO05D009967 7.3e-17 90.9 58 67.2
Prupe.2G017200 Prunus persica HOM05D007963 ORTHO05D009967 7.3e-17 90.9 88 52.3
Sed0005364 Sechium edule HOM05D007963 ORTHO05D009967 1.2e-16 90.1 94 52.1
Atru.chr11.2601 Acer truncatum HOM05D007963 ORTHO05D009967 2.8e-16 89.0 84 54.8
Os03g0217000 Oryza sativa ssp. japonica HOM05D007963 ORTHO05D009967 8.1e-16 87.4 55 69.1
Lj3g0025556 Lotus japonicus HOM05D007963 ORTHO05D009967 1.4e-15 86.7 100 52.0
Ciclev10033085m.g Citrus clementina HOM05D007963 ORTHO05D009967 1.8e-15 86.3 76 53.9
Zm00001eb400040 Zea mays HOM05D007963 ORTHO05D009967 2.3e-15 85.9 57 64.9
Sed0018324 Sechium edule HOM05D007963 ORTHO05D009967 6.8e-15 84.3 90 50.0
AUR62009397 Chenopodium quinoa HOM05D007963 ORTHO05D009967 2.0e-14 82.8 88 51.1
Sabra09G0043500 Salix brachista HOM05D007963 ORTHO05D009967 2.6e-14 82.4 109 46.8
VMungo1127G0040 Vigna mungo HOM05D007963 ORTHO05D009967 1.7e-13 79.7 111 40.5
Lalb_Chr20g0107921 Lupinus albus HOM05D007963 ORTHO05D009967 2.9e-13 79.0 74 56.8
TWI09G0461 Tripterygium wilfordii HOM05D007963 ORTHO05D009967 2.9e-13 79.0 67 53.7
Phvul.011G012801 Phaseolus vulgaris HOM05D007963 ORTHO05D009967 1.1e-12 77.0 56 60.7
Medtr4g039540 Medicago truncatula HOM05D007963 ORTHO05D009967 1.9e-12 76.3 76 48.7
Glyma.12G008400 Glycine max HOM05D007963 ORTHO05D009967 5.4e-12 74.7 104 42.3
BcaB01g00449 Brassica carinata HOM05D007963 ORTHO05D009967 1.5e-09 66.6 90 42.2
C08p27320 Brassica napus HOM05D007963 ORTHO05D009967 1.5e-09 66.6 90 42.2
A09p45130 Brassica napus HOM05D007963 ORTHO05D009967 1.9e-09 66.2 91 41.8
BraA09t39974Z Brassica rapa HOM05D007963 ORTHO05D009967 1.9e-09 66.2 91 41.8
BcaNung06964 Brassica carinata HOM05D007963 ORTHO05D009967 4.3e-09 65.1 91 40.7
Cpa.g.sc125.16 Carica papaya HOM05D007963 ORTHO05D009967 4.3e-09 65.1 97 45.4
Thhalv10010836m.g Eutrema salsugineum HOM05D007963 ORTHO05D009967 4.3e-09 65.1 101 41.6
BcaB02g08592 Brassica carinata HOM05D007963 ORTHO05D009967 5.6e-09 64.7 96 41.7
BcaC02g09285 Brassica carinata HOM05D007963 ORTHO05D009967 1.6e-08 63.2 97 40.2
BolC8t50349H Brassica oleracea HOM05D007963 ORTHO05D009967 2.1e-08 62.8 90 40.0
CARHR161770 Cardamine hirsuta HOM05D007963 ORTHO05D009967 2.1e-08 62.8 96 42.7
SEGI_13442 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 2.8e-08 62.4 44 56.8
SEGI_37070 Sequoiadendron giganteum HOM05D007963 ORTHO05D009967 2.8e-08 62.4 44 56.8
A04p07310 Brassica napus HOM05D007963 ORTHO05D009967 3.6e-08 62.0 96 37.5
BraA04t16426Z Brassica rapa HOM05D007963 ORTHO05D009967 3.6e-08 62.0 96 37.5
ATR0332G088 Amborella trichopoda HOM05D007963 ORTHO05D009967 1.8e-07 59.7 49 53.1
BcaNung06087 Brassica carinata HOM05D007963 ORTHO05D009967 3.1e-07 58.9 76 40.8
Carub.0005s1839 Capsella rubella HOM05D007963 ORTHO05D009967 8.9e-07 57.4 90 35.6
AL5G32620 Arabidopsis lyrata HOM05D007963 ORTHO05D009967 2.0e-06 56.2 67 47.8
C04p40920 Brassica napus HOM05D007963 ORTHO05D009967 3.4e-06 55.5 92 38.0
AT3G52070 Arabidopsis thaliana HOM05D007963 ORTHO05D009967 4.4e-06 55.1 67 46.3
AagrBONN_evm.TU.Sc2ySwM_228.4962 Anthoceros agrestis HOM05D025110 ORTHO05D009967 5.8e-06 54.7 40 55.0


User provided reference genes

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