Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01248 Erythranthe guttata HOM05D001966 ORTHO05D011119 2.3e-37 158.3 75 100.0
arahy.Tifrunner.gnm1.ann1.H5WC3R Arachis hypogaea HOM05D001966 ORTHO05D011119 7.7e-25 116.7 71 80.3
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 7.7e-25 116.7 71 80.3
arahy.Tifrunner.gnm1.ann1.1DF8CR Arachis hypogaea HOM05D001966 ORTHO05D011119 2.2e-24 115.2 71 78.9
Cfa023003 Carpinus fangiana HOM05D001966 ORTHO05D011119 3.8e-24 114.4 69 81.2
arahy.Tifrunner.gnm1.ann1.2KV113 Arachis hypogaea HOM05D000580 ORTHO05D011119 1.4e-23 112.5 74 75.7
arahy.Tifrunner.gnm1.ann1.CV40CV Arachis hypogaea HOM05D001966 ORTHO05D010127 3.2e-23 111.3 71 77.5
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 3.2e-23 111.3 69 78.3
arahy.Tifrunner.gnm1.ann1.KT8FLV Arachis hypogaea HOM05D001966 ORTHO05D011119 5.5e-23 110.5 71 76.1
Gohir.D02G156751 Gossypium hirsutum HOM05D001966 ORTHO05D011119 1.4e-21 105.9 68 75.0
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.8e-21 105.5 69 73.9
Nitab4.5_0003644g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010127 1.5e-20 102.4 73 68.5
Gorai.005G175800 Gossypium raimondii HOM05D001966 ORTHO05D011119 3.3e-20 101.3 68 72.1
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 5.7e-20 100.5 69 75.4
arahy.Tifrunner.gnm1.ann1.KXW2A6 Arachis hypogaea HOM05D001966 ORTHO05D011119 3.7e-19 97.8 61 78.7
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 3.7e-19 97.8 71 71.8
arahy.Tifrunner.gnm1.ann1.MHEL4J Arachis hypogaea HOM05D001966 ORTHO05D011119 2.4e-18 95.1 66 71.2
CDE02G3054 Ceratophyllum demersum HOM05D001966 ORTHO05D011119 2.6e-17 91.7 58 77.6
Oeu012760.1 Olea europaea HOM05D001966 ORTHO05D010127 6.3e-11 70.5 55 63.6
Oeu022559.1 Olea europaea HOM05D001966 ORTHO05D011119 1.4e-10 69.3 51 62.7
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 2.2e-08 62.0 46 71.7
arahy.Tifrunner.gnm1.ann1.9XT8BN Arachis hypogaea HOM05D001966 ORTHO05D010127 2.5e-07 58.5 43 72.1
arahy.Tifrunner.gnm1.ann1.FF8QKQ Arachis hypogaea HOM05D001966 ORTHO05D011119 2.5e-07 58.5 43 72.1
BcaNung07086 Brassica carinata HOM05D001966 ORTHO05D011119 2.5e-07 58.5 43 72.1
Gohir.1Z049692 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.5e-07 58.5 43 72.1
Gohir.1Z050866 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.5e-07 58.5 43 72.1
ScUNg0000270 Simmondsia chinensis HOM05D001966 ORTHO05D011119 2.5e-07 58.5 43 72.1
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 2.5e-07 58.5 43 72.1
Hma1.2p1_0051F.1_g029255 Hydrangea macrophylla HOM05D001966 ORTHO05D011119 1.6e-06 55.8 43 69.8
Gohir.A01G119800 Gossypium hirsutum HOM05D001966 ORTHO05D011119 2.1e-06 55.5 43 69.8
Gorai.007G237900 Gossypium raimondii HOM05D001966 ORTHO05D011119 2.1e-06 55.5 43 69.8
arahy.Tifrunner.gnm1.ann1.VLT00F Arachis hypogaea HOM05D001966 ORTHO05D011119 2.7e-06 55.1 43 67.4
Gohir.D05G230250 Gossypium hirsutum HOM05D001966 ORTHO05D011119 4.7e-06 54.3 43 62.8
Gohir.A10G178000 Gossypium hirsutum HOM05D001966 ORTHO05D011119 6.1e-06 53.9 43 67.4
Gohir.A05G366050 Gossypium hirsutum HOM05D001966 ORTHO05D011119 8.0e-06 53.5 43 67.4


User provided reference genes

Program Settings