Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 5.5e-75 284.3 149 100.0
Migut.B00886 Erythranthe guttata HOM05D002974 ORTHO05D002992 1.5e-24 116.7 127 56.7
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 7.1e-22 107.8 151 51.0
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 4.0e-17 92.0 151 45.0
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 2.6e-16 89.4 138 44.2
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 4.5e-16 88.6 135 45.9
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 2.2e-15 86.3 139 46.8
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 1.1e-14 84.0 136 44.1
SalBow5G5227 Salvia bowleyana HOM05D002974 ORTHO05D002992 3.2e-14 82.4 126 48.4
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 4.2e-14 82.0 149 43.0
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 6.0e-13 78.2 156 39.1
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 1.8e-12 76.6 156 37.2
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 3.0e-12 75.9 152 42.1
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 3.9e-12 75.5 126 43.7
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 6.7e-12 74.7 149 37.6
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 1.5e-11 73.6 130 42.3
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 2.5e-11 72.8 157 37.6
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 3.3e-11 72.4 127 41.7
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 1.6e-10 70.1 151 37.7
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.8e-10 69.3 126 41.3
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 3.1e-09 65.9 138 40.6
SalBow6G5116 Salvia bowleyana HOM05D002974 ORTHO05D002992 3.1e-09 65.9 117 42.7
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 4.0e-09 65.5 59 52.5
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 5.3e-09 65.1 117 39.3
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 6.9e-09 64.7 127 39.4
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 1.2e-08 63.9 120 35.8
MSTRG.26159 Avicennia marina HOM05D002974 ORTHO05D002992 1.5e-08 63.5 126 38.9
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 1.5e-08 63.5 160 35.0
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 3.4e-08 62.4 138 35.5
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 4.5e-08 62.0 120 40.0
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 4.5e-08 62.0 100 41.0
EL10Ac2g02772 Beta vulgaris HOM05D012416 ORTHO05D002992 7.6e-08 61.2 141 35.5
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 7.6e-08 61.2 65 56.9
AUR62032633 Chenopodium quinoa HOM05D012416 ORTHO05D002992 9.9e-08 60.8 166 33.1
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 9.9e-08 60.8 138 36.2
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 9.9e-08 60.8 49 61.2
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 9.9e-08 60.8 128 39.8
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 9.9e-08 60.8 127 32.3
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 1.7e-07 60.1 99 39.4
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 1.7e-07 60.1 50 62.0
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.7e-07 60.1 138 36.2
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 1.7e-07 60.1 54 59.3
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 1.7e-07 60.1 93 44.1
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 2.2e-07 59.7 76 47.4
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 2.2e-07 59.7 50 62.0
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 2.2e-07 59.7 46 67.4
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 2.2e-07 59.7 58 60.3
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 2.9e-07 59.3 53 56.6
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 2.9e-07 59.3 65 55.4
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 3.8e-07 58.9 94 39.4
Sc10g0004500 Simmondsia chinensis HOM05D002974 ORTHO05D002992 3.8e-07 58.9 137 38.0
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 4.9e-07 58.5 113 36.3
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 4.9e-07 58.5 64 51.6
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 4.9e-07 58.5 106 37.7
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 4.9e-07 58.5 138 35.5
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 4.9e-07 58.5 106 37.7
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 4.9e-07 58.5 60 56.7
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 4.9e-07 58.5 60 56.7
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 4.9e-07 58.5 87 40.2
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 4.9e-07 58.5 87 40.2
Sed0006618 Sechium edule HOM05D002974 ORTHO05D002992 4.9e-07 58.5 51 64.7
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 6.4e-07 58.2 56 57.1
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 6.4e-07 58.2 61 55.7
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 8.4e-07 57.8 52 53.8
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 8.4e-07 57.8 52 63.5
Eucgr.G03218 Eucalyptus grandis HOM05D002974 ORTHO05D002992 8.4e-07 57.8 73 45.2
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 8.4e-07 57.8 92 40.2
Sc11g0006360 Simmondsia chinensis HOM05D002974 ORTHO05D002992 1.1e-06 57.4 108 35.2
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 1.1e-06 57.4 143 32.9
FAN09G2803 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.4e-06 57.0 57 59.6
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 1.4e-06 57.0 47 59.6
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 1.4e-06 57.0 126 34.9
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.4e-06 57.0 43 67.4
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 1.4e-06 57.0 65 55.4
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.9e-06 56.6 60 55.0
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 1.9e-06 56.6 132 31.8
Sed0004403 Sechium edule HOM05D002974 ORTHO05D002992 1.9e-06 56.6 90 40.0
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 2.4e-06 56.2 96 42.7
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 2.4e-06 56.2 47 61.7
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 2.4e-06 56.2 117 36.8
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 2.4e-06 56.2 52 57.7
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 2.4e-06 56.2 45 66.7
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 2.4e-06 56.2 60 51.7
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 2.4e-06 56.2 133 36.1
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 2.4e-06 56.2 50 60.0
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 2.4e-06 56.2 121 37.2
Ah.10g030130 Amaranthus hybridus HOM05D002974 ORTHO05D002992 3.2e-06 55.8 50 62.0
CiPaw.09G047800 Carya illinoinensis HOM05D002974 ORTHO05D002992 3.2e-06 55.8 51 62.7
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 3.2e-06 55.8 53 58.5
TWI53G1119 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 3.2e-06 55.8 115 33.0
AUR62026884 Chenopodium quinoa HOM05D012416 ORTHO05D002992 4.2e-06 55.5 176 31.2
AUR62044059 Chenopodium quinoa HOM05D012416 ORTHO05D006373 4.2e-06 55.5 176 31.2
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 4.2e-06 55.5 85 42.4
Glyma.04G134200 Glycine max HOM05D002974 ORTHO05D002992 4.2e-06 55.5 65 52.3
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 4.2e-06 55.5 68 52.9
FAN05G2143 Fragaria x ananassa HOM05D002974 ORTHO05D002992 5.5e-06 55.1 57 57.9
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 5.5e-06 55.1 67 49.3
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 5.5e-06 55.1 98 40.8
Medtr8g040080 Medicago truncatula HOM05D002974 ORTHO05D002992 5.5e-06 55.1 48 56.2
Sed0014788 Sechium edule HOM05D002974 ORTHO05D002992 5.5e-06 55.1 58 53.4
Psat4g145360 Pisum sativum HOM05D002974 ORTHO05D002992 9.3e-06 54.3 49 53.1
TPR.G22516 Trifolium pratense HOM05D002974 ORTHO05D002992 9.3e-06 54.3 49 53.1
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 9.3e-06 54.3 137 30.7


User provided reference genes

Program Settings