Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01233 Erythranthe guttata HOM05D007414 ORTHO05D009482 3.9e-96 354.8 174 100.0
MSTRG.20514 Avicennia marina HOM05D007414 ORTHO05D009482 1.4e-66 256.5 173 75.1
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 3.6e-49 198.7 120 78.3
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.0e-48 197.2 120 76.7
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 1.0e-48 197.2 171 60.2
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 3.0e-48 195.7 168 63.7
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 3.9e-48 195.3 164 64.0
CAN.G1045.37 Capsicum annuum HOM05D007414 ORTHO05D009482 2.0e-47 193.0 175 58.9
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 2.0e-47 193.0 162 62.3
vmacro12698 Vaccinium macrocarpon HOM05D007414 ORTHO05D009482 3.3e-47 192.2 178 57.3
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 1.3e-46 190.3 127 70.9
DCAR_031835 Daucus carota HOM05D007414 ORTHO05D009482 1.4e-45 186.8 135 66.7
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.8e-45 186.4 160 63.1
Peaxi162Scf00767g00524 Petunia axillaris HOM05D007414 ORTHO05D009482 3.1e-45 185.7 116 74.1
CANSAT56G3550 Cannabis sativa HOM05D007414 ORTHO05D009482 5.3e-45 184.9 177 59.9
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 5.3e-45 184.9 150 63.3
Lsat_1_v5_gn_4_29901 Lactuca sativa HOM05D007414 ORTHO05D009482 1.2e-44 183.7 150 62.7
Eucgr.G03234 Eucalyptus grandis HOM05D007414 ORTHO05D009482 2.6e-44 182.6 139 64.0
CSS0022385 Camellia sinensis var. sinensis HOM05D007414 ORTHO05D009482 5.9e-44 181.4 137 67.2
Dinv32026 Davidia involucrata HOM05D007414 ORTHO05D009482 5.9e-44 181.4 132 68.2
Actinidia02265 Actinidia chinensis HOM05D007414 ORTHO05D009482 1.0e-43 180.6 125 68.8
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 1.7e-43 179.9 167 60.5
MBI19_g25612_MAGBIO Magnolia biondii HOM05D007414 ORTHO05D009482 1.1e-42 177.2 132 67.4
Manes.11G006000 Manihot esculenta HOM05D007414 ORTHO05D009482 1.5e-42 176.8 146 63.0
Nitab4.5_0008639g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.5e-42 176.8 113 75.2
HanXRQChr16g0525321 Helianthus annuus HOM05D007414 ORTHO05D009482 7.2e-42 174.5 125 68.8
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 1.2e-41 173.7 125 68.0
Duzib114G0511 Durio zibethinus HOM05D007414 ORTHO05D009482 2.1e-41 172.9 120 70.0
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 2.1e-41 172.9 164 57.9
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 2.7e-41 172.6 160 56.9
Gorai.011G215300 Gossypium raimondii HOM05D007414 ORTHO05D009482 3.6e-41 172.2 165 57.6
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 6.1e-41 171.4 170 56.5
MD02G1287000 Malus domestica HOM05D007414 ORTHO05D009482 8.0e-41 171.0 140 62.9
COL.COLO4_20658 Corchorus olitorius HOM05D007414 ORTHO05D009482 1.4e-40 170.2 141 61.7
Gohir.D10G192600 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.4e-40 170.2 165 57.0
PGR031G2549 Punica granatum HOM05D007414 ORTHO05D009482 1.8e-40 169.9 163 56.4
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 2.3e-40 169.5 162 55.6
QL04p017831 Quercus lobata HOM05D007414 ORTHO05D009482 2.3e-40 169.5 154 57.8
Thecc.10G154500 Theobroma cacao HOM05D007414 ORTHO05D009482 3.0e-40 169.1 168 57.1
ECA234G1800 Erigeron canadensis HOM05D007414 ORTHO05D009482 4.0e-40 168.7 114 72.8
Prupe.2G036300 Prunus persica HOM05D007414 ORTHO05D009482 4.0e-40 168.7 167 55.7
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 4.0e-40 168.7 116 68.1
Haze_03038 Corylus avellana HOM05D007414 ORTHO05D009482 6.7e-40 167.9 128 64.8
Gohir.A06G174800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 1.5e-39 166.8 173 54.3
arahy.Tifrunner.gnm1.ann1.GMDI7B Arachis hypogaea HOM05D007414 ORTHO05D009482 2.0e-39 166.4 164 55.5
Gohir.D06G184800 Gossypium hirsutum HOM05D007414 ORTHO05D009482 2.0e-39 166.4 120 66.7
Glyma.04G137000 Glycine max HOM05D007414 ORTHO05D009482 3.3e-39 165.6 140 58.6
Lj3g0021878 Lotus japonicus HOM05D007414 ORTHO05D009482 3.3e-39 165.6 116 67.2
arahy.Tifrunner.gnm1.ann1.XZAR1L Arachis hypogaea HOM05D007414 ORTHO05D009482 7.5e-39 164.5 167 54.5
TPR.G1409 Trifolium pratense HOM05D007414 ORTHO05D009482 7.5e-39 164.5 165 53.3
FAN03G2686 Fragaria x ananassa HOM05D007414 ORTHO05D009482 9.7e-39 164.1 113 67.3
Gorai.010G216100 Gossypium raimondii HOM05D007414 ORTHO05D009482 9.7e-39 164.1 173 53.8
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 1.7e-38 163.3 118 63.6
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 2.2e-38 162.9 134 61.2
FAN10G2712 Fragaria x ananassa HOM05D007414 ORTHO05D009482 2.2e-38 162.9 168 53.0
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 2.2e-38 162.9 150 60.0
FvH4_7g03070 Fragaria vesca HOM05D006097 ORTHO05D008538 2.8e-38 162.5 113 66.4
Glyma.11G155300 Glycine max HOM05D007414 ORTHO05D009482 3.7e-38 162.2 116 65.5
Phvul.005G026400 Phaseolus vulgaris HOM05D007414 ORTHO05D009482 4.8e-38 161.8 117 64.1
FAN06G2659 Fragaria x ananassa HOM05D007414 ORTHO05D009482 8.2e-38 161.0 169 52.1
VMungo1080G1369 Vigna mungo HOM05D007414 ORTHO05D009482 3.1e-37 159.1 162 51.2
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 4.1e-37 158.7 157 56.1
Gohir.A10G185400 Gossypium hirsutum HOM05D007414 ORTHO05D009482 5.3e-37 158.3 174 52.9
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 1.2e-36 157.1 120 63.3
Sed0006433 Sechium edule HOM05D007414 ORTHO05D009482 1.2e-36 157.1 116 61.2
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 1.6e-36 156.8 119 65.5
MELO3C005149.2 Cucumis melo HOM05D007414 ORTHO05D009482 2.7e-36 156.0 153 54.2
Rhsim01G0124300 Rhododendron simsii HOM05D007414 ORTHO05D009482 2.7e-36 156.0 123 63.4
Manes.15G192920 Manihot esculenta HOM05D007414 ORTHO05D009482 3.5e-36 155.6 115 67.0
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 1.3e-35 153.7 159 52.2
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.3e-35 153.7 118 63.6
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 1.7e-35 153.3 118 62.7
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 1.5e-34 150.2 159 52.2
Aqoxy1G00360 Aquilegia oxysepala HOM05D007414 ORTHO05D009482 7.2e-34 147.9 134 56.0
Nn7g36678 Nelumbo nucifera HOM05D007414 ORTHO05D009482 9.4e-34 147.5 167 50.3
THA.LOC104826727 Tarenaya hassleriana HOM05D007414 ORTHO05D009482 9.4e-34 147.5 126 57.1
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 2.7e-33 146.0 120 60.0
ATR0745G014 Amborella trichopoda HOM05D007414 ORTHO05D009482 4.0e-32 142.1 150 53.3
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 3.7e-30 135.6 95 70.5
Potri.003G196200 Populus trichocarpa HOM05D007414 ORTHO05D009482 1.2e-28 130.6 166 47.6
Zm00001eb128490 Zea mays HOM05D007414 ORTHO05D009482 1.6e-28 130.2 117 56.4
Hund13359 Selenicereus undatus HOM05D007414 ORTHO05D009482 3.8e-27 125.6 93 63.4
SEGI_40936 Sequoiadendron giganteum HOM05D007414 ORTHO05D009482 4.4e-23 112.1 111 48.6
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 3.7e-22 109.0 136 45.6
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 2.5e-18 96.3 117 42.7
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.2e-15 87.4 110 41.8
Lsat_1_v5_gn_3_3821 Lactuca sativa HOM05D007414 ORTHO05D009482 1.2e-12 77.4 50 68.0
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 2.0e-12 76.6 51 66.7


User provided reference genes

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