Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01200 Erythranthe guttata HOM05D006279 ORTHO05D008055 3.8e-56 221.5 127 100.0
Oeu006489.1 Olea europaea HOM05D006279 ORTHO05D008055 5.8e-33 144.4 104 70.2
MSTRG.20541 Avicennia marina HOM05D006279 ORTHO05D008055 2.9e-32 142.1 104 72.1
Cfa011174 Carpinus fangiana HOM05D006279 ORTHO05D008055 5.1e-29 131.3 92 70.7
Cc09_g10080 Coffea canephora HOM05D006279 ORTHO05D008055 1.1e-28 130.2 99 66.7
CAN.G1592.9 Capsicum annuum HOM05D006279 ORTHO05D008055 1.5e-28 129.8 127 56.7
Dinv44192 Davidia involucrata HOM05D006279 ORTHO05D008055 1.3e-27 126.7 90 68.9
CSS0005410 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 2.8e-27 125.6 86 69.8
PGSC0003DMG400022672 Solanum tuberosum HOM05D006279 ORTHO05D008055 3.7e-27 125.2 103 61.2
Hma1.2p1_0847F.1_g227850 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 6.2e-27 124.4 105 64.8
Potri.005G066900 Populus trichocarpa HOM05D006279 ORTHO05D008055 8.2e-27 124.0 114 59.6
CSS0021017 Camellia sinensis var. sinensis HOM05D006279 ORTHO05D008055 1.1e-26 123.6 88 67.0
Haze_02661 Corylus avellana HOM05D006279 ORTHO05D008055 1.1e-26 123.6 89 70.8
Solyc06g054590.3 Solanum lycopersicum HOM05D006279 ORTHO05D008055 1.1e-26 123.6 127 53.5
Haze_02674 Corylus avellana HOM05D006279 ORTHO05D008055 1.4e-26 123.2 89 70.8
Peaxi162Scf00386g00058 Petunia axillaris HOM05D006279 ORTHO05D008055 1.4e-26 123.2 103 60.2
PGSC0003DMG400030782 Solanum tuberosum HOM05D006279 ORTHO05D008055 1.4e-26 123.2 100 63.0
Peaxi162Scf00033g00134 Petunia axillaris HOM05D006279 ORTHO05D008055 1.8e-26 122.9 100 62.0
Sopen06g019660 Solanum pennellii HOM05D006279 ORTHO05D008055 1.8e-26 122.9 127 53.5
Atru.chr1.2785 Acer truncatum HOM05D006279 ORTHO05D008055 2.4e-26 122.5 86 70.9
vmacro13565 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 3.1e-26 122.1 96 62.5
Ciclev10003637m.g Citrus clementina HOM05D006279 ORTHO05D008055 4.0e-26 121.7 70 80.0
CiPaw.14G026200 Carya illinoinensis HOM05D006279 ORTHO05D008055 5.3e-26 121.3 95 64.2
Sabra05G0055000 Salix brachista HOM05D006279 ORTHO05D008055 6.9e-26 120.9 114 56.1
Glyma.08G354200 Glycine max HOM05D006279 ORTHO05D008055 1.2e-25 120.2 102 60.8
Cpa.g.sc2692.1 Carica papaya HOM05D006279 ORTHO05D008055 2.6e-25 119.0 91 63.7
Nitab4.5_0000829g0220 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.6e-25 119.0 101 61.4
Actinidia20026 Actinidia chinensis HOM05D006279 ORTHO05D008055 4.5e-25 118.2 84 66.7
QL10p041722 Quercus lobata HOM05D006279 ORTHO05D008055 4.5e-25 118.2 95 62.1
vmacro12040 Vaccinium macrocarpon HOM05D006279 ORTHO05D008055 4.5e-25 118.2 89 61.8
arahy.Tifrunner.gnm1.ann1.96G0FW Arachis hypogaea HOM05D006279 ORTHO05D008055 1.3e-24 116.7 94 61.7
Duzib177G0075 Durio zibethinus HOM05D006279 ORTHO05D008055 1.3e-24 116.7 88 67.0
arahy.Tifrunner.gnm1.ann1.YQI87S Arachis hypogaea HOM05D006279 ORTHO05D008055 1.7e-24 116.3 94 61.7
Lj1g0019467 Lotus japonicus HOM05D006279 ORTHO05D008055 1.7e-24 116.3 68 80.9
CAN.G256.17 Capsicum annuum HOM05D006279 ORTHO05D008055 2.2e-24 115.9 98 61.2
Ca_13203_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 2.2e-24 115.9 102 58.8
Nn2g15145 Nelumbo nucifera HOM05D006279 ORTHO05D008055 2.2e-24 115.9 91 59.3
Nitab4.5_0000644g0080 Nicotiana tabacum HOM05D006279 ORTHO05D008055 2.2e-24 115.9 101 58.4
TAR369G0312 Trochodendron aralioides HOM05D006279 ORTHO05D008055 2.2e-24 115.9 84 64.3
Gohir.A05G286900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 3.8e-24 115.2 88 63.6
Manes.01G181300 Manihot esculenta HOM05D006279 ORTHO05D008055 3.8e-24 115.2 70 74.3
Nitab4.5_0010800g0010 Nicotiana tabacum HOM05D006279 ORTHO05D008055 3.8e-24 115.2 101 59.4
Sc09g0002260 Simmondsia chinensis HOM05D006279 ORTHO05D008055 3.8e-24 115.2 87 62.1
TPR.G17035 Trifolium pratense HOM05D006279 ORTHO05D008055 3.8e-24 115.2 110 58.2
TAR623G0329 Trochodendron aralioides HOM05D006279 ORTHO05D008055 3.8e-24 115.2 84 63.1
CANSAT64G0511 Cannabis sativa HOM05D006279 ORTHO05D008055 6.5e-24 114.4 90 60.0
Glyma.18G170600 Glycine max HOM05D006279 ORTHO05D008055 6.5e-24 114.4 88 65.9
Gohir.D05G287900 Gossypium hirsutum HOM05D006279 ORTHO05D008055 6.5e-24 114.4 88 63.6
Gorai.009G302900 Gossypium raimondii HOM05D006279 ORTHO05D008055 6.5e-24 114.4 88 63.6
Eucgr.I00130 Eucalyptus grandis HOM05D006279 ORTHO05D008055 8.4e-24 114.0 65 83.1
Phvul.008G125700 Phaseolus vulgaris HOM05D006279 ORTHO05D008055 8.4e-24 114.0 125 52.8
Potri.007G102600 Populus trichocarpa HOM05D006279 ORTHO05D008055 1.1e-23 113.6 78 69.2
Actinidia30262 Actinidia chinensis HOM05D006279 ORTHO05D008055 1.4e-23 113.2 85 65.9
Psat6g191840 Pisum sativum HOM05D006279 ORTHO05D008055 1.4e-23 113.2 102 55.9
Prupe.3G241300 Prunus persica HOM05D006279 ORTHO05D008055 1.4e-23 113.2 90 62.2
Sabra07G0084300 Salix brachista HOM05D006279 ORTHO05D008055 1.9e-23 112.8 78 69.2
PGR119G2211 Punica granatum HOM05D006279 ORTHO05D008055 2.5e-23 112.5 77 67.5
VMungo1383G1366 Vigna mungo HOM05D006279 ORTHO05D008055 2.5e-23 112.5 125 52.0
Nitab4.5_0001688g0060 Nicotiana tabacum HOM05D006279 ORTHO05D008055 3.2e-23 112.1 101 59.4
THA.LOC104818424 Tarenaya hassleriana HOM05D006279 ORTHO05D008055 4.2e-23 111.7 87 62.1
Thecc.08G189700 Theobroma cacao HOM05D006279 ORTHO05D008055 4.2e-23 111.7 87 62.1
CANSAT78G0480 Cannabis sativa HOM05D006279 ORTHO05D008055 5.5e-23 111.3 86 61.6
Carub.0006s0782 Capsella rubella HOM05D006279 ORTHO05D008055 7.1e-23 110.9 89 61.8
Lalb_Chr01g0022321 Lupinus albus HOM05D006279 ORTHO05D008055 7.1e-23 110.9 102 54.9
MD09G1082400 Malus domestica HOM05D006279 ORTHO05D008055 7.1e-23 110.9 101 57.4
EL10Ac4g09617 Beta vulgaris HOM05D006279 ORTHO05D008055 9.3e-23 110.5 101 54.5
TWI79G1313 Tripterygium wilfordii HOM05D006279 ORTHO05D008055 1.2e-22 110.2 91 64.8
FAN09G2945 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.6e-22 109.8 114 50.0
CARHR204140 Cardamine hirsuta HOM05D006279 ORTHO05D008055 2.7e-22 109.0 89 64.0
Psat4g003200 Pisum sativum HOM05D006279 ORTHO05D008055 2.7e-22 109.0 92 59.8
Medtr1g098510 Medicago truncatula HOM05D006279 ORTHO05D008055 3.5e-22 108.6 100 58.0
COL.COLO4_11288 Corchorus olitorius HOM05D006279 ORTHO05D008055 4.6e-22 108.2 68 73.5
FAN05G3461 Fragaria x ananassa HOM05D006279 ORTHO05D008055 4.6e-22 108.2 114 50.0
MD10G1003300 Malus domestica HOM05D006279 ORTHO05D008055 4.6e-22 108.2 101 56.4
RcHm_v2.0_Chr2g0163441 Rosa chinensis HOM05D006279 ORTHO05D008055 7.9e-22 107.5 114 49.1
Ah.06g190980 Amaranthus hybridus HOM05D006279 ORTHO05D008055 1.0e-21 107.1 101 55.4
ClCG02G000360 Citrullus lanatus HOM05D006279 ORTHO05D008055 1.0e-21 107.1 72 68.1
MBI06_g37673_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.0e-21 107.1 71 70.4
MBI06_g46723_MAGBIO Magnolia biondii HOM05D006279 ORTHO05D008055 1.0e-21 107.1 71 70.4
AT5G09270 Arabidopsis thaliana HOM05D006279 ORTHO05D008055 1.3e-21 106.7 85 61.2
DCAR_026025 Daucus carota HOM05D006279 ORTHO05D008055 1.3e-21 106.7 88 61.4
BolC2t06340H Brassica oleracea HOM05D006279 ORTHO05D008055 1.8e-21 106.3 92 56.5
Thhalv10015068m.g Eutrema salsugineum HOM05D006279 ORTHO05D008055 2.3e-21 105.9 89 58.4
AL6G19660 Arabidopsis lyrata HOM05D006279 ORTHO05D008055 3.0e-21 105.5 89 58.4
BraA02t04974Z Brassica rapa HOM05D006279 ORTHO05D008055 3.0e-21 105.5 92 56.5
arahy.Tifrunner.gnm1.ann1.BRZ89T Arachis hypogaea HOM05D006279 ORTHO05D008055 3.9e-21 105.1 66 71.2
BcaB05g21561 Brassica carinata HOM05D006279 ORTHO05D008055 3.9e-21 105.1 89 57.3
BraA10t44844Z Brassica rapa HOM05D006279 ORTHO05D008055 5.1e-21 104.8 93 58.1
AUR62006855 Chenopodium quinoa HOM05D006279 ORTHO05D008055 5.1e-21 104.8 65 70.8
BcaC03g13247 Brassica carinata HOM05D006279 ORTHO05D008055 6.7e-21 104.4 94 58.5
C02p03790 Brassica napus HOM05D006279 ORTHO05D008055 6.7e-21 104.4 94 58.5
HanXRQChr10g0308251 Helianthus annuus HOM05D006279 ORTHO05D008055 8.7e-21 104.0 99 53.5
GSVIVG01023542001 Vitis vinifera HOM05D006279 ORTHO05D008055 8.7e-21 104.0 91 56.0
AUR62000510 Chenopodium quinoa HOM05D006279 ORTHO05D008055 1.1e-20 103.6 65 69.2
A10p27950 Brassica napus HOM05D004285 ORTHO05D005176 1.5e-20 103.2 80 61.2
BolC9t59565H Brassica oleracea HOM05D004285 ORTHO05D005176 1.5e-20 103.2 89 57.3
FvH4_6g45500 Fragaria vesca HOM05D006279 ORTHO05D008055 1.5e-20 103.2 89 58.4
FAN14G0828 Fragaria x ananassa HOM05D006279 ORTHO05D008055 1.5e-20 103.2 89 58.4
Sp6g34040 Schrenkiella parvula HOM05D006279 ORTHO05D008055 1.5e-20 103.2 85 56.5
BcaB08g37221 Brassica carinata HOM05D006279 ORTHO05D008055 1.9e-20 102.8 87 54.0
C09p68090 Brassica napus HOM05D004285 ORTHO05D005176 1.9e-20 102.8 86 58.1
C09p68110 Brassica napus HOM05D006279 ORTHO05D008055 1.9e-20 102.8 86 58.1
C09p68150 Brassica napus HOM05D006279 ORTHO05D008055 1.9e-20 102.8 86 58.1
Lsat_1_v5_gn_5_86080 Lactuca sativa HOM05D006279 ORTHO05D008055 2.5e-20 102.4 105 53.3
SHI36067 Sapria himalayana HOM05D006279 ORTHO05D008055 2.5e-20 102.4 90 58.9
Aqoxy2G01154 Aquilegia oxysepala HOM05D006279 ORTHO05D008055 3.3e-20 102.1 86 55.8
HPP92_013811 Vanilla planifolia HOM05D006279 ORTHO05D008055 3.3e-20 102.1 64 70.3
Rhsim10G0172600 Rhododendron simsii HOM05D006279 ORTHO05D008055 4.3e-20 101.7 78 60.3
ATR0824G232 Amborella trichopoda HOM05D006279 ORTHO05D008055 5.7e-20 101.3 84 60.7
Eucgr.L03476 Eucalyptus grandis HOM05D006279 ORTHO05D008055 9.7e-20 100.5 55 83.6
C09p68050 Brassica napus HOM05D006279 ORTHO05D008055 2.2e-19 99.4 82 56.1
Os01g0861000 Oryza sativa ssp. japonica HOM05D006279 ORTHO05D008055 2.2e-19 99.4 70 71.4
COL.COLO4_13057 Corchorus olitorius HOM05D006279 ORTHO05D008055 4.8e-19 98.2 87 55.2
Atru.chr9.833 Acer truncatum HOM05D000003 ORTHO05D000126 1.8e-18 96.3 67 65.7
MELO3C023226.2 Cucumis melo HOM05D006279 ORTHO05D008055 2.4e-18 95.9 89 56.2
CsaV3_2G019480 Cucumis sativus L. HOM05D006279 ORTHO05D008055 2.4e-18 95.9 86 55.8
Eucgr.I00134 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.1e-18 95.5 54 77.8
Eucgr.I00143 Eucalyptus grandis HOM05D006279 ORTHO05D008055 3.1e-18 95.5 54 77.8
arahy.Tifrunner.gnm1.ann1.BUL9CE Arachis hypogaea HOM05D006279 ORTHO05D008055 3.4e-17 92.0 59 69.5
Aa31LG3G17730 Aethionema arabicum HOM05D006279 ORTHO05D008055 5.9e-17 91.3 82 57.3
Sed0009157 Sechium edule HOM05D006279 ORTHO05D008055 2.9e-16 89.0 82 52.4
SEGI_20234 Sequoiadendron giganteum HOM05D006279 ORTHO05D008055 8.8e-13 77.4 63 50.8
COL.COLO4_36340 Corchorus olitorius HOM05D006279 ORTHO05D008055 4.3e-12 75.1 47 63.8
Sopen01g029410 Solanum pennellii HOM05D006279 ORTHO05D008055 7.4e-12 74.3 70 50.0
Oeu062074.1 Olea europaea HOM05D013196 ORTHO05D010523 8.2e-11 70.9 43 79.1
Mapoly0027s0076 Marchantia polymorpha HOM05D006279 ORTHO05D008055 1.2e-09 67.0 60 46.7
Pp3c8_7150 Physcomitrium patens HOM05D006279 ORTHO05D008055 1.3e-08 63.5 69 39.1
Hma1.2p1_4173F.1_g338420 Hydrangea macrophylla HOM05D006279 ORTHO05D008055 1.7e-08 63.2 63 60.3
Ca_10674_v3 Cicer arietinum L. HOM05D006279 ORTHO05D008055 2.7e-06 55.8 44 72.7


User provided reference genes

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