Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01185 Erythranthe guttata HOM05D007594 ORTHO05D009607 1.6e-163 579.3 292 100.0
SalBow5G4015 Salvia bowleyana HOM05D007594 ORTHO05D009607 1.7e-107 393.3 318 67.0
SGA_v2.0_scaffold124G33645 Striga asiatica HOM05D007594 ORTHO05D009607 1.9e-103 379.8 300 66.7
Dinv03295 Davidia involucrata HOM05D007594 ORTHO05D009607 3.0e-72 276.2 297 52.5
TAR633G1990 Trochodendron aralioides HOM05D007594 ORTHO05D009607 7.5e-68 261.5 302 47.0
Actinidia06215 Actinidia chinensis HOM05D007594 ORTHO05D009607 4.9e-67 258.8 295 47.5
MD00G1152500 Malus domestica HOM05D007594 ORTHO05D009607 3.2e-66 256.1 298 47.0
Peaxi162Scf02035g00032 Petunia axillaris HOM05D007594 ORTHO05D009607 1.3e-64 250.8 296 46.6
Hma1.2p1_1342F.1_g276950 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 3.0e-64 249.6 301 47.5
unitig_22.g5331 Utricularia gibba HOM05D007594 ORTHO05D009607 3.9e-64 249.2 264 52.3
Sopen07g024530 Solanum pennellii HOM05D007594 ORTHO05D009607 3.3e-63 246.1 296 44.9
Lj9P657T24 Lonicera japonica HOM05D007594 ORTHO05D009607 4.3e-63 245.7 270 49.6
CAN.G897.9 Capsicum annuum HOM05D007594 ORTHO05D009607 5.6e-63 245.4 293 45.1
Solyc07g048100.3 Solanum lycopersicum HOM05D007594 ORTHO05D009607 9.5e-63 244.6 296 44.9
GSVIVG01036598001 Vitis vinifera HOM05D007594 ORTHO05D009607 3.6e-62 242.7 292 48.3
Prupe.2G044000 Prunus persica HOM05D007594 ORTHO05D009607 1.1e-61 241.1 275 46.2
Cc00_g06100 Coffea canephora HOM05D007594 ORTHO05D009607 1.4e-61 240.7 296 45.9
Phvul.005G018200 Phaseolus vulgaris HOM05D007594 ORTHO05D009607 1.2e-60 237.7 294 44.6
Ciclev10003355m.g Citrus clementina HOM05D007594 ORTHO05D009607 2.6e-60 236.5 273 47.6
Manes.04G156000 Manihot esculenta HOM05D007594 ORTHO05D009607 5.8e-60 235.3 301 42.5
Sc11g0006300 Simmondsia chinensis HOM05D007594 ORTHO05D009607 3.7e-59 232.6 271 45.8
Thecc.10G140800 Theobroma cacao HOM05D007594 ORTHO05D009607 4.9e-59 232.3 265 47.9
PGSC0003DMG400006140 Solanum tuberosum HOM05D007594 ORTHO05D009607 1.4e-58 230.7 296 42.6
TWI63G1387 Tripterygium wilfordii HOM05D007594 ORTHO05D009607 2.4e-58 229.9 299 45.5
Lj3g0014217 Lotus japonicus HOM05D007594 ORTHO05D009607 3.2e-58 229.6 295 44.1
DCAR_006600 Daucus carota HOM05D007594 ORTHO05D009607 5.4e-58 228.8 299 45.2
Duzib128G1040 Durio zibethinus HOM05D007594 ORTHO05D009607 2.1e-57 226.9 267 46.8
Nitab4.5_0004215g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 2.7e-57 226.5 291 43.6
Nitab4.5_0004358g0020 Nicotiana tabacum HOM05D007594 ORTHO05D009607 3.5e-57 226.1 290 43.1
TPR.G20651 Trifolium pratense HOM05D007594 ORTHO05D009607 3.5e-57 226.1 297 44.1
VMungo1080G0650 Vigna mungo HOM05D007594 ORTHO05D009607 3.5e-57 226.1 295 43.7
Psat5g215360 Pisum sativum HOM05D007594 ORTHO05D009607 7.8e-57 224.9 299 43.8
Medtr3g013490 Medicago truncatula HOM05D007594 ORTHO05D009607 1.3e-56 224.2 295 43.1
arahy.Tifrunner.gnm1.ann1.HR2C9L Arachis hypogaea HOM05D007594 ORTHO05D009607 3.0e-56 223.0 299 42.8
Gorai.011G220800 Gossypium raimondii HOM05D007594 ORTHO05D009607 3.9e-56 222.6 291 42.3
MBI13_g07373_MAGBIO Magnolia biondii HOM05D007594 ORTHO05D009607 5.1e-56 222.2 241 47.3
arahy.Tifrunner.gnm1.ann1.IJ2ITM Arachis hypogaea HOM05D007594 ORTHO05D009607 1.5e-55 220.7 299 42.5
CiPaw.13G016300 Carya illinoinensis HOM05D007594 ORTHO05D009607 1.9e-55 220.3 294 43.5
Gohir.A10G189500 Gossypium hirsutum HOM05D007594 ORTHO05D009607 1.9e-55 220.3 291 43.3
Aqoxy1G00415 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 3.3e-55 219.5 266 45.1
ClCG11G013140 Citrullus lanatus HOM05D007594 ORTHO05D009607 4.3e-55 219.2 227 47.6
Potri.003G193100 Populus trichocarpa HOM05D007594 ORTHO05D009607 5.6e-55 218.8 298 41.3
CsaV3_5G029660 Cucumis sativus L. HOM05D007594 ORTHO05D009607 2.8e-54 216.5 280 42.5
vmacro13773 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 2.8e-54 216.5 238 48.7
Gohir.D10G197300 Gossypium hirsutum HOM05D007594 ORTHO05D009607 3.6e-54 216.1 292 42.1
PSO339G5236 Papaver somniferum HOM05D007594 ORTHO05D009607 3.6e-54 216.1 261 42.9
AUR62023865 Chenopodium quinoa HOM05D007594 ORTHO05D009607 4.7e-54 215.7 220 50.9
Glyma.11G170937 Glycine max HOM05D007594 ORTHO05D009607 6.2e-54 215.3 295 41.0
RcHm_v2.0_Chr1g0327541 Rosa chinensis HOM05D007594 ORTHO05D009607 6.2e-54 215.3 265 44.5
Nn7g36922 Nelumbo nucifera HOM05D007594 ORTHO05D009607 8.1e-54 214.9 251 46.2
ATR0307G127 Amborella trichopoda HOM05D007594 ORTHO05D009607 1.8e-53 213.8 295 41.0
FvH4_7g03921 Fragaria vesca HOM05D007594 ORTHO05D009607 1.7e-51 207.2 264 43.6
FAN06G1277 Fragaria x ananassa HOM05D007594 ORTHO05D009607 1.7e-51 207.2 264 43.6
Haze_02988 Corylus avellana HOM05D007594 ORTHO05D009607 1.9e-50 203.8 259 46.3
Hma1.2p1_1730F.1_g299670 Hydrangea macrophylla HOM05D007594 ORTHO05D009607 5.4e-50 202.2 258 47.7
THA.LOC104826746 Tarenaya hassleriana HOM05D007594 ORTHO05D009607 1.2e-49 201.1 246 43.1
CANSAT56G2828 Cannabis sativa HOM05D007594 ORTHO05D009607 3.5e-49 199.5 266 40.6
Zm00001eb062110 Zea mays HOM05D007594 ORTHO05D009607 4.6e-49 199.1 289 39.8
FAN03G3082 Fragaria x ananassa HOM05D000688 ORTHO05D003888 6.6e-48 195.3 274 39.8
Sed0005696 Sechium edule HOM05D007594 ORTHO05D009607 6.6e-48 195.3 249 45.4
Eucgr.G03206 Eucalyptus grandis HOM05D007594 ORTHO05D009607 2.5e-47 193.4 247 41.7
ECA246G0181 Erigeron canadensis HOM05D007594 ORTHO05D009607 7.3e-47 191.8 294 40.5
Os03g0811200 Oryza sativa ssp. japonica HOM05D007594 ORTHO05D009607 1.6e-46 190.7 293 38.2
HanXRQChr05g0146261 Helianthus annuus HOM05D007594 ORTHO05D009607 6.2e-46 188.7 268 39.9
EL10Ac3g05954 Beta vulgaris HOM05D007594 ORTHO05D009607 8.1e-46 188.3 305 37.7
PSO384G4678 Papaver somniferum HOM05D007594 ORTHO05D009607 8.1e-46 188.3 233 41.2
AUR62002319 Chenopodium quinoa HOM05D007594 ORTHO05D009607 5.8e-44 182.2 254 41.7
Lsat_1_v5_gn_1_118241 Lactuca sativa HOM05D007594 ORTHO05D009607 4.2e-42 176.0 270 39.6
Nn032s41616 Nelumbo nucifera HOM05D007594 ORTHO05D009607 8.7e-40 168.3 153 51.0
Rhsim07G0071100 Rhododendron simsii HOM05D007594 ORTHO05D009607 1.1e-37 161.4 173 45.7
FAN01G0543 Fragaria x ananassa HOM05D007594 ORTHO05D009607 4.0e-37 159.5 203 42.4
Atru.chr12.1243 Acer truncatum HOM05D007594 ORTHO05D009607 6.2e-30 135.6 169 45.0
Hund03164 Selenicereus undatus HOM05D007594 ORTHO05D009607 2.0e-28 130.6 136 47.8
Lalb_Chr24g0402821 Lupinus albus HOM05D007594 ORTHO05D009607 6.4e-27 125.6 148 45.9
Aqoxy1G00417 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 1.1e-23 114.8 136 44.9
Ca_14092_v3 Cicer arietinum L. HOM05D007594 ORTHO05D009607 1.8e-21 107.5 151 39.1
CSS0016538 Camellia sinensis var. sinensis HOM05D007594 ORTHO05D009607 6.5e-19 99.0 111 48.6
Atru.chr12.1242 Acer truncatum HOM05D007594 ORTHO05D009607 8.7e-16 88.6 93 49.5
Hund03165 Selenicereus undatus HOM05D007594 ORTHO05D009607 3.4e-12 76.6 115 45.2
Aqoxy1G00418 Aquilegia oxysepala HOM05D007594 ORTHO05D009607 2.9e-11 73.6 52 61.5
AagrBONN_evm.TU.Sc2ySwM_368.2306 Anthoceros agrestis HOM05D007594 ORTHO05D009607 6.5e-11 72.4 131 31.3
Lj2g0024514 Lotus japonicus HOM05D007594 ORTHO05D009607 6.5e-11 72.4 62 54.8
Hund03166 Selenicereus undatus HOM05D007594 ORTHO05D009607 2.5e-10 70.5 114 42.1
COL.COLO4_04921 Corchorus olitorius HOM05D007594 ORTHO05D009607 4.2e-10 69.7 59 57.6
SEGI_38959 Sequoiadendron giganteum HOM05D007594 ORTHO05D009607 7.2e-10 68.9 72 34.7
Lalb_Chr24g0402831 Lupinus albus HOM05D007594 ORTHO05D009607 3.9e-08 63.2 111 36.9
CBR_g49793 Chara braunii HOM05D000019 ORTHO05D000048 9.7e-07 58.5 111 33.3
TPR.G1438 Trifolium pratense HOM05D007594 ORTHO05D009607 1.3e-06 58.2 111 35.1
vmacro13770 Vaccinium macrocarpon HOM05D007594 ORTHO05D009607 8.2e-06 55.5 54 51.9


User provided reference genes

Program Settings