Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 1.4e-108 396.4 209 100.0
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 1.8e-71 273.1 210 73.8
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 5.8e-70 268.1 209 69.4
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 3.2e-60 235.7 165 78.2
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 8.1e-56 221.1 170 70.0
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 8.1e-56 221.1 182 65.9
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 1.8e-55 219.9 216 59.7
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 2.0e-54 216.5 188 66.0
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 4.4e-54 215.3 146 75.3
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 4.4e-54 215.3 153 69.9
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 5.8e-54 214.9 187 63.1
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 5.8e-54 214.9 150 75.3
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 7.5e-54 214.5 145 75.9
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 9.9e-54 214.2 206 58.7
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.3e-53 213.8 206 58.7
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.7e-53 213.4 159 69.2
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.9e-53 212.6 187 62.6
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 2.9e-53 212.6 191 61.3
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 8.3e-53 211.1 162 67.9
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 8.3e-53 211.1 159 69.2
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 1.1e-52 210.7 187 63.6
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 3.2e-52 209.1 161 68.3
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.2e-52 209.1 159 68.6
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 4.1e-52 208.8 148 73.6
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 4.1e-52 208.8 211 57.8
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 4.1e-52 208.8 160 69.4
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 7.1e-52 208.0 152 68.4
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 2.1e-51 206.5 172 63.4
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 4.6e-51 205.3 169 65.1
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 6.0e-51 204.9 162 69.1
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 7.8e-51 204.5 115 83.5
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 1.0e-50 204.1 153 66.0
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 1.3e-50 203.8 183 62.8
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 3.0e-50 202.6 159 63.5
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 3.0e-50 202.6 128 78.1
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 3.9e-50 202.2 156 67.9
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 5.1e-50 201.8 169 62.7
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 5.1e-50 201.8 162 66.7
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 8.6e-50 201.1 227 53.7
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 8.6e-50 201.1 177 62.7
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 1.9e-49 199.9 148 70.3
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 1.9e-49 199.9 162 66.0
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 5.6e-49 198.4 202 55.4
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 9.5e-49 197.6 162 64.8
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 9.5e-49 197.6 180 59.4
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.6e-48 196.8 124 77.4
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 1.6e-48 196.8 147 70.1
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 3.6e-48 195.7 204 56.9
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 3.6e-48 195.7 153 68.6
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 4.7e-48 195.3 173 60.7
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 4.7e-48 195.3 190 60.0
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 6.2e-48 194.9 203 56.7
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 6.2e-48 194.9 126 73.8
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 8.1e-48 194.5 143 68.5
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 1.1e-47 194.1 156 67.3
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 1.1e-47 194.1 166 63.3
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 3.1e-47 192.6 155 64.5
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 4.0e-47 192.2 169 60.9
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 5.2e-47 191.8 168 61.3
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 5.2e-47 191.8 167 62.3
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 6.8e-47 191.4 126 73.8
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 1.5e-46 190.3 146 65.8
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 2.0e-46 189.9 166 62.0
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 4.4e-46 188.7 125 74.4
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 5.8e-46 188.3 148 66.2
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 7.6e-46 188.0 197 56.3
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 6.4e-45 184.9 142 65.5
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 3.2e-44 182.6 117 73.5
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 4.2e-44 182.2 193 54.9
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 2.7e-43 179.5 120 71.7
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 3.9e-42 175.6 115 74.8
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 6.6e-42 174.9 125 68.8
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 7.3e-41 171.4 185 54.1
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 2.4e-39 166.4 128 68.8
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 9.0e-39 164.5 143 62.2
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 4.4e-38 162.2 114 74.6
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 7.6e-38 161.4 142 62.0
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.9e-36 156.8 212 45.3
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 9.3e-36 154.5 92 82.6
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 3.5e-35 152.5 94 80.9
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 6.0e-35 151.8 154 53.2
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 6.0e-35 151.8 98 72.4
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 6.0e-35 151.8 122 61.5
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 1.0e-34 151.0 85 84.7
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 2.5e-33 146.4 124 62.9
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.1e-32 143.3 190 48.9
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 1.4e-31 140.6 166 50.6
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 3.4e-30 136.0 126 54.8
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 1.3e-29 134.0 122 59.8
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 4.9e-29 132.1 83 78.3
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 6.4e-29 131.7 101 66.3
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 2.4e-28 129.8 71 85.9
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 5.4e-28 128.6 94 69.1
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 1.6e-27 127.1 83 73.5
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 9.6e-25 117.9 159 47.8
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 1.3e-24 117.5 150 50.7
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 2.1e-24 116.7 80 72.5
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 7.6e-22 108.2 187 42.2
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 6.0e-19 98.6 92 58.7
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 1.9e-17 93.6 49 91.8
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 1.6e-16 90.5 124 44.4
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 1.1e-15 87.8 70 62.9
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 2.6e-14 83.2 64 62.5
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 7.6e-14 81.6 128 43.8
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 2.9e-13 79.7 125 40.0
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 7.1e-12 75.1 88 52.3
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 2.7e-11 73.2 177 31.6
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 3.3e-09 66.2 158 30.4
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 3.3e-09 66.2 116 31.9
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 4.3e-09 65.9 158 29.7
QL04p022221 Quercus lobata HOM05D000002 ORTHO05D000001 3.7e-08 62.8 96 46.9
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 4.8e-08 62.4 151 28.5
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 6.3e-08 62.0 145 31.0
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 1.4e-07 60.8 170 28.2
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 1.4e-07 60.8 117 29.1
PGSC0003DMG400027028 Solanum tuberosum HOM05D009116 ORTHO05D011299 1.8e-07 60.5 159 28.3
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 2.4e-07 60.1 186 29.0
PGR031G3920 Punica granatum HOM05D009116 ORTHO05D011299 2.4e-07 60.1 153 29.4
EL10Ac1g00288 Beta vulgaris HOM05D009116 ORTHO05D011299 4.1e-07 59.3 170 30.6
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 4.1e-07 59.3 113 32.7
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 4.1e-07 59.3 172 27.9
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 6.9e-07 58.5 146 29.5
Sopen06g029290 Solanum pennellii HOM05D009116 ORTHO05D011299 2.0e-06 57.0 167 29.3
Nn1g02040 Nelumbo nucifera HOM05D009116 ORTHO05D011299 2.6e-06 56.6 158 29.1
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 3.4e-06 56.2 196 28.6
CAN.G65.136 Capsicum annuum HOM05D009116 ORTHO05D011299 5.9e-06 55.5 196 26.0
AagrBONN_evm.TU.Sc2ySwM_368.2113 Anthoceros agrestis HOM05D009116 ORTHO05D011299 7.7e-06 55.1 130 30.0
Solyc06g072930.4 Solanum lycopersicum HOM05D009116 ORTHO05D011299 7.7e-06 55.1 182 26.9


User provided reference genes

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