Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 2.1e-183 645.6 327 100.0
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.2e-162 576.6 319 94.4
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 1.2e-111 407.1 302 69.5
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 9.5e-104 380.9 308 63.3
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 6.8e-102 374.8 305 62.3
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 8.9e-102 374.4 318 61.6
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 1.5e-101 373.6 295 64.7
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 9.9e-101 370.9 295 64.7
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 1.7e-100 370.2 291 62.9
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 1.7e-100 370.2 302 63.2
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 1.9e-99 366.7 303 62.0
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.9e-99 366.7 290 63.4
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 2.4e-99 366.3 294 62.6
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 7.1e-99 364.8 301 63.5
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 9.2e-99 364.4 294 61.9
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 2.1e-98 363.2 280 65.0
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 1.0e-97 360.9 290 62.1
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 1.3e-97 360.5 296 62.2
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 1.7e-97 360.1 293 62.1
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 1.7e-97 360.1 308 59.7
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 3.9e-97 359.0 306 59.5
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 5.1e-97 358.6 301 62.1
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 8.6e-97 357.8 289 63.3
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 1.1e-96 357.5 298 61.1
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 7.3e-96 354.8 299 61.2
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 1.2e-95 354.0 279 62.4
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 2.1e-95 353.2 299 61.5
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 8.1e-95 351.3 295 60.7
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 8.1e-95 351.3 311 59.2
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 1.1e-94 350.9 272 62.5
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 1.4e-94 350.5 305 60.0
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.4e-94 350.5 332 56.3
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 2.4e-94 349.7 281 62.6
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 2.4e-94 349.7 271 62.4
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 5.2e-94 348.6 280 61.4
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 8.9e-94 347.8 293 60.1
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 8.9e-94 347.8 271 62.7
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 1.2e-93 347.4 285 61.1
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 2.0e-93 346.7 294 57.5
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 2.0e-93 346.7 278 62.6
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 2.6e-93 346.3 309 57.9
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 4.4e-93 345.5 299 57.5
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 7.6e-93 344.7 291 58.8
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 9.9e-93 344.4 291 59.1
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 1.3e-92 344.0 278 62.6
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 1.7e-92 343.6 279 61.3
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 1.7e-92 343.6 275 61.8
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 2.2e-92 343.2 293 59.4
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 2.9e-92 342.8 279 61.3
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 2.9e-92 342.8 296 59.1
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 3.8e-92 342.4 299 56.9
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 6.4e-92 341.7 301 58.8
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 1.9e-91 340.1 318 56.3
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 9.3e-91 337.8 306 58.2
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 2.7e-90 336.3 327 55.0
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 2.7e-90 336.3 294 58.5
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 7.8e-90 334.7 328 54.6
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 3.0e-89 332.8 274 62.0
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 8.7e-89 331.3 297 56.6
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 2.5e-88 329.7 291 56.0
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 3.3e-88 329.3 293 57.3
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 5.6e-88 328.6 293 57.3
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 7.3e-88 328.2 311 54.7
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 9.6e-88 327.8 272 61.8
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 1.6e-87 327.0 286 57.0
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 1.6e-87 327.0 325 52.0
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 2.1e-87 326.6 296 57.1
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 2.1e-87 326.6 294 57.1
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 2.8e-87 326.2 306 55.6
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 4.8e-87 325.5 285 58.2
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 6.2e-87 325.1 294 57.1
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 1.1e-86 324.3 300 56.3
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 1.8e-86 323.6 300 57.3
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 1.8e-86 323.6 300 56.3
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 2.4e-86 323.2 310 52.9
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 4.0e-86 322.4 266 62.8
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 5.3e-86 322.0 300 56.0
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 6.4e-84 315.1 318 52.5
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 8.4e-84 314.7 251 62.9
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 1.1e-83 314.3 304 55.3
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 1.1e-83 314.3 301 57.1
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 3.2e-83 312.8 294 55.4
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 7.1e-83 311.6 277 58.1
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 9.3e-83 311.2 318 52.2
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 9.3e-83 311.2 318 52.2
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 1.2e-82 310.8 296 54.4
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 4.6e-82 308.9 294 54.8
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 6.0e-82 308.5 250 62.0
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 5.1e-81 305.4 250 61.2
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 4.3e-80 302.4 254 60.2
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 9.6e-80 301.2 282 55.3
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 1.4e-78 297.4 242 60.3
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 4.0e-78 295.8 282 54.6
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 2.0e-77 293.5 341 50.4
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 7.1e-75 285.0 220 63.2
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 1.8e-73 280.4 276 53.6
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 3.9e-73 279.3 296 51.0
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 1.6e-71 273.9 252 56.0
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 6.9e-70 268.5 323 46.4
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 1.3e-68 264.2 242 57.0
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 3.0e-65 253.1 290 47.9
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 5.7e-64 248.8 214 59.3
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 3.7e-63 246.1 230 57.4
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.4e-59 234.2 297 46.1
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 5.1e-57 225.7 278 44.2
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 1.3e-55 221.1 217 56.2
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 1.5e-53 214.2 275 46.5
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 3.8e-52 209.5 299 41.8
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 7.9e-50 201.8 184 56.0
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 1.8e-49 200.7 283 40.6
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 3.1e-46 189.9 245 46.1
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 6.3e-39 165.6 317 36.0
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 3.5e-37 159.8 162 51.9
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 1.8e-33 147.5 261 36.8
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 7.2e-27 125.6 102 58.8
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 7.2e-27 125.6 102 58.8
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 3.6e-26 123.2 115 53.9
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.3e-20 104.8 105 48.6
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.3e-12 77.4 83 48.2
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 5.0e-12 76.3 51 68.6
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 1.1e-11 75.1 87 48.3
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 4.2e-11 73.2 81 46.9
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 9.5e-11 72.0 81 45.7
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 9.5e-11 72.0 81 45.7
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 2.0e-08 64.3 79 43.0
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 9.2e-06 55.5 41 65.9


User provided reference genes

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