Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01094 Erythranthe guttata HOM05D001069 ORTHO05D007586 1.0e-61 240.0 129 100.0
MSTRG.20449 Avicennia marina HOM05D001069 ORTHO05D007586 1.9e-55 219.2 129 89.1
SGA_v2.0_scaffold5G02970 Striga asiatica HOM05D001069 ORTHO05D007586 9.4e-55 216.9 129 89.1
Nitab4.5_0008996g0040 Nicotiana tabacum HOM05D001069 ORTHO05D007586 1.0e-53 213.4 129 87.6
Nitab4.5_0001592g0010 Nicotiana tabacum HOM05D001069 ORTHO05D007586 3.0e-53 211.8 129 86.8
Peaxi162Scf00282g00417 Petunia axillaris HOM05D001069 ORTHO05D007586 5.2e-53 211.1 129 85.3
Oeu002656.1 Olea europaea HOM05D001069 ORTHO05D007586 8.8e-53 210.3 129 84.5
Thecc.05G281200 Theobroma cacao HOM05D001069 ORTHO05D007586 3.3e-52 208.4 127 84.3
Duzib128G0644 Durio zibethinus HOM05D001069 ORTHO05D007586 1.7e-51 206.1 127 82.7
Duzib177G1121 Durio zibethinus HOM05D001069 ORTHO05D007586 1.7e-51 206.1 127 83.5
Lj5g0026442 Lotus japonicus HOM05D001069 ORTHO05D007586 2.2e-51 205.7 129 83.7
Prupe.6G344500 Prunus persica HOM05D001069 ORTHO05D007586 2.2e-51 205.7 129 85.3
ECA233G1896 Erigeron canadensis HOM05D000316 ORTHO05D000374 4.8e-51 204.5 129 83.7
Atru.chr2.835 Acer truncatum HOM05D001069 ORTHO05D007586 6.3e-51 204.1 129 81.4
CAN.G134.94 Capsicum annuum HOM05D001069 ORTHO05D007586 8.2e-51 203.8 128 84.4
CSS0013670 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 1.1e-50 203.4 129 82.2
CSS0018717 Camellia sinensis var. sinensis HOM05D001069 ORTHO05D007586 1.1e-50 203.4 129 82.2
Dinv20292 Davidia involucrata HOM05D001069 ORTHO05D007586 1.1e-50 203.4 129 82.9
CiPaw.08G122900 Carya illinoinensis HOM05D001069 ORTHO05D007586 1.4e-50 203.0 129 82.2
Glyma.20G225500 Glycine max HOM05D001069 ORTHO05D007586 1.4e-50 203.0 129 82.2
Gohir.A13G104300 Gossypium hirsutum HOM05D001069 ORTHO05D007586 1.4e-50 203.0 127 82.7
Lalb_Chr21g0311011 Lupinus albus HOM05D001069 ORTHO05D007586 1.8e-50 202.6 129 82.2
Psat6g145040 Pisum sativum HOM05D001069 ORTHO05D007586 1.8e-50 202.6 129 82.9
GSVIVG01036275001 Vitis vinifera HOM05D001069 ORTHO05D007586 1.8e-50 202.6 129 82.9
Cc02_g30720 Coffea canephora HOM05D001069 ORTHO05D007586 2.4e-50 202.2 129 82.2
Manes.08G135700 Manihot esculenta HOM05D001069 ORTHO05D007586 2.4e-50 202.2 129 83.7
Manes.09G151800 Manihot esculenta HOM05D001069 ORTHO05D007586 2.4e-50 202.2 129 82.2
Actinidia32808 Actinidia chinensis HOM05D001069 ORTHO05D007586 3.1e-50 201.8 129 82.2
Haze_04370 Corylus avellana HOM05D001069 ORTHO05D007586 3.1e-50 201.8 129 82.2
VMungo0720G0790 Vigna mungo HOM05D001069 ORTHO05D007586 3.1e-50 201.8 129 82.2
Cfa006409 Carpinus fangiana HOM05D001069 ORTHO05D001549 4.1e-50 201.4 121 85.1
Gohir.D13G107700 Gossypium hirsutum HOM05D001069 ORTHO05D007586 4.1e-50 201.4 127 81.9
Glyma.10G162900 Glycine max HOM05D001069 ORTHO05D007586 5.3e-50 201.1 129 82.2
Phvul.007G187900 Phaseolus vulgaris HOM05D001069 ORTHO05D007586 5.3e-50 201.1 129 82.9
PGR004G2600 Punica granatum HOM05D001069 ORTHO05D007586 5.3e-50 201.1 129 81.4
DCAR_006651 Daucus carota HOM05D001069 ORTHO05D007586 7.0e-50 200.7 129 83.7
MD12G1242900 Malus domestica HOM05D001069 ORTHO05D007586 7.0e-50 200.7 129 82.9
CANSAT54G2612 Cannabis sativa HOM05D001069 ORTHO05D007586 9.1e-50 200.3 128 80.5
Gorai.013G120600 Gossypium raimondii HOM05D001069 ORTHO05D007586 9.1e-50 200.3 125 82.4
MD04G1225700 Malus domestica HOM05D001069 ORTHO05D007586 9.1e-50 200.3 129 82.9
TAR636G2667 Trochodendron aralioides HOM05D001069 ORTHO05D001549 9.1e-50 200.3 121 83.5
COL.COLO4_15368 Corchorus olitorius HOM05D001069 ORTHO05D007586 1.2e-49 199.9 125 81.6
Eucgr.H04324 Eucalyptus grandis HOM05D001069 ORTHO05D007586 1.2e-49 199.9 129 79.8
Ca_10042_v3 Cicer arietinum L. HOM05D001069 ORTHO05D007586 1.6e-49 199.5 121 85.1
Nn1g02583 Nelumbo nucifera HOM05D001069 ORTHO05D007586 2.0e-49 199.1 129 79.8
Rhsim07G0074100 Rhododendron simsii HOM05D001069 ORTHO05D007586 2.0e-49 199.1 129 82.2
TPR.G12907 Trifolium pratense HOM05D001069 ORTHO05D007586 2.6e-49 198.7 129 82.2
unitig_52.g17389 Utricularia gibba HOM05D001069 ORTHO05D007586 2.6e-49 198.7 129 81.4
Medtr1g080770 Medicago truncatula HOM05D001069 ORTHO05D007586 3.5e-49 198.4 129 81.4
RcHm_v2.0_Chr3g0450701 Rosa chinensis HOM05D001069 ORTHO05D007586 4.5e-49 198.0 129 79.8
arahy.Tifrunner.gnm1.ann1.SY74BB Arachis hypogaea HOM05D001069 ORTHO05D007586 7.7e-49 197.2 129 79.8
arahy.Tifrunner.gnm1.ann1.AYUH3A Arachis hypogaea HOM05D001069 ORTHO05D007586 1.0e-48 196.8 129 79.8
Lalb_Chr06g0168091 Lupinus albus HOM05D001069 ORTHO05D007586 1.3e-48 196.4 129 79.8
QL03p027238 Quercus lobata HOM05D001069 ORTHO05D007586 1.3e-48 196.4 128 80.5
FAN05G3732 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.7e-48 196.1 129 79.8
FAN09G0270 Fragaria x ananassa HOM05D001069 ORTHO05D007586 1.7e-48 196.1 129 79.8
Potri.013G042100 Populus trichocarpa HOM05D001069 ORTHO05D007586 1.7e-48 196.1 129 79.8
FvH4_6g02700 Fragaria vesca HOM05D001069 ORTHO05D007586 2.2e-48 195.7 129 79.1
FAN14G5212 Fragaria x ananassa HOM05D001069 ORTHO05D007586 2.2e-48 195.7 129 79.1
CiPaw.07G068400 Carya illinoinensis HOM05D001069 ORTHO05D007586 6.5e-48 194.1 129 77.5
FAN02G3324 Fragaria x ananassa HOM05D001069 ORTHO05D007586 6.5e-48 194.1 129 79.1
FAN14G1639 Fragaria x ananassa HOM05D001069 ORTHO05D007586 8.5e-48 193.7 129 78.3
FAN14G4385 Fragaria x ananassa HOM05D001069 ORTHO05D007586 8.5e-48 193.7 129 78.3
THA.LOC104823751 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 8.5e-48 193.7 129 80.6
Potri.005G054500 Populus trichocarpa HOM05D001069 ORTHO05D007586 1.5e-47 193.0 129 78.3
HanXRQChr16g0514711 Helianthus annuus HOM05D001069 ORTHO05D007586 1.9e-47 192.6 129 78.3
THA.LOC104805822 Tarenaya hassleriana HOM05D001069 ORTHO05D007586 1.9e-47 192.6 129 81.4
AL1G19210 Arabidopsis lyrata HOM05D001069 ORTHO05D007586 4.2e-47 191.4 130 78.5
AT1G08780 Arabidopsis thaliana HOM05D001069 ORTHO05D007586 4.2e-47 191.4 130 78.5
Nn3g19512 Nelumbo nucifera HOM05D001069 ORTHO05D007586 1.2e-46 189.9 129 75.2
Sabra05G0047400 Salix brachista HOM05D001069 ORTHO05D001549 1.6e-46 189.5 129 77.5
TWI12G0612 Tripterygium wilfordii HOM05D001069 ORTHO05D007586 1.6e-46 189.5 129 77.5
Carub.0001s0812 Capsella rubella HOM05D001069 ORTHO05D007586 3.6e-46 188.3 118 82.2
Ciclev10029576m.g Citrus clementina HOM05D001069 ORTHO05D007586 4.7e-46 188.0 129 75.2
PSO210G4375 Papaver somniferum HOM05D001069 ORTHO05D007586 4.7e-46 188.0 129 76.7
Sc09g0003960 Simmondsia chinensis HOM05D001069 ORTHO05D007586 4.7e-46 188.0 129 77.5
BcaB07g34137 Brassica carinata HOM05D001069 ORTHO05D007586 1.4e-45 186.4 128 76.6
ClCG02G016730 Citrullus lanatus HOM05D001069 ORTHO05D007586 1.4e-45 186.4 121 76.9
PSO832G3124 Papaver somniferum HOM05D001069 ORTHO05D007586 1.8e-45 186.0 129 76.0
PGSC0003DMG401019457 Solanum tuberosum HOM05D001069 ORTHO05D007586 1.8e-45 186.0 129 79.8
Aqoxy2G00949 Aquilegia oxysepala HOM05D001069 ORTHO05D007586 2.3e-45 185.7 129 73.6
CARHR008700 Cardamine hirsuta HOM05D001069 ORTHO05D007586 2.3e-45 185.7 131 75.6
Sed0025346 Sechium edule HOM05D001069 ORTHO05D007586 2.3e-45 185.7 129 74.4
MELO3C004390.2 Cucumis melo HOM05D001069 ORTHO05D007586 3.0e-45 185.3 129 72.9
A06p05680 Brassica napus HOM05D001069 ORTHO05D007586 6.7e-45 184.1 128 75.0
Sp1g07420 Schrenkiella parvula HOM05D001069 ORTHO05D007586 8.8e-45 183.7 131 74.8
C05p06850 Brassica napus HOM05D001069 ORTHO05D007586 1.2e-44 183.3 127 74.8
AUR62000994 Chenopodium quinoa HOM05D001069 ORTHO05D007586 1.5e-44 183.0 129 76.7
AUR62004967 Chenopodium quinoa HOM05D001069 ORTHO05D007586 2.0e-44 182.6 129 76.0
Hund22103 Selenicereus undatus HOM05D001069 ORTHO05D007586 2.0e-44 182.6 123 76.4
Thhalv10009095m.g Eutrema salsugineum HOM05D001069 ORTHO05D007586 3.3e-44 181.8 131 74.0
CDE06G2591 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 4.4e-44 181.4 129 73.6
A08p34980 Brassica napus HOM05D001069 ORTHO05D007586 2.2e-43 179.1 127 71.7
EL10Ac4g09163 Beta vulgaris HOM05D001069 ORTHO05D007586 2.8e-43 178.7 129 73.6
BraA08t35409Z Brassica rapa HOM05D001069 ORTHO05D007586 2.8e-43 178.7 127 71.7
Os03g0628900 Oryza sativa ssp. japonica HOM05D001069 ORTHO05D007586 2.8e-43 178.7 129 70.5
Solyc01g097300.4 Solanum lycopersicum HOM05D001069 ORTHO05D007586 2.8e-43 178.7 129 76.7
Sopen01g040970 Solanum pennellii HOM05D001069 ORTHO05D007586 2.8e-43 178.7 129 76.7
BcaC07g38446 Brassica carinata HOM05D001069 ORTHO05D007586 6.3e-43 177.6 131 71.0
BcaNung06267 Brassica carinata HOM05D001069 ORTHO05D007586 6.3e-43 177.6 131 70.2
C08p12160 Brassica napus HOM05D001069 ORTHO05D007586 6.3e-43 177.6 131 71.0
BolC5t29444H Brassica oleracea HOM05D001069 ORTHO05D007586 8.2e-43 177.2 118 76.3
BraA06t23778Z Brassica rapa HOM05D001069 ORTHO05D007586 1.8e-42 176.0 118 75.4
Aa31sc20G40 Aethionema arabicum HOM05D001069 ORTHO05D007586 3.1e-42 175.3 129 72.9
Sed0020567 Sechium edule HOM05D001069 ORTHO05D007586 5.3e-42 174.5 129 71.3
CsaV3_2G004010 Cucumis sativus L. HOM05D001069 ORTHO05D007586 3.5e-41 171.8 129 69.0
SGA_v2.0_scaffold24G10675 Striga asiatica HOM05D004194 ORTHO05D005641 4.5e-41 171.4 148 66.2
HanXRQChr17g0559331 Helianthus annuus HOM05D001069 ORTHO05D007586 1.5e-39 166.4 129 72.1
BolC8t48854H Brassica oleracea HOM05D001069 ORTHO05D007586 1.2e-38 163.3 152 59.2
ATR0665G433 Amborella trichopoda HOM05D001069 ORTHO05D007586 1.4e-37 159.8 129 65.1
CDE07G0518 Ceratophyllum demersum HOM05D001069 ORTHO05D007586 4.0e-37 158.3 129 67.4
MBI04_g44868_MAGBIO Magnolia biondii HOM05D001069 ORTHO05D007586 2.6e-36 155.6 129 65.9
HPP92_026288 Vanilla planifolia HOM05D001069 ORTHO05D007586 1.3e-35 153.3 129 64.3
Zm00001eb051110 Zea mays HOM05D001069 ORTHO05D007586 2.8e-35 152.1 129 62.8
Zm00001eb218870 Zea mays HOM05D001069 ORTHO05D007586 6.3e-35 151.0 129 62.8
CBR_g8595 Chara braunii HOM05D001069 ORTHO05D007586 1.9e-31 139.4 120 60.8
Pp3c16_6640 Physcomitrium patens HOM05D001069 ORTHO05D007586 2.5e-31 139.0 120 61.7
Sabra13G0038700 Salix brachista HOM05D001069 ORTHO05D007586 1.2e-30 136.7 88 80.7
Lsat_1_v5_gn_5_68360 Lactuca sativa HOM05D001069 ORTHO05D007586 6.1e-30 134.4 87 80.5
vmacro13808 Vaccinium macrocarpon HOM05D001069 ORTHO05D007586 6.1e-30 134.4 87 80.5
AagrBONN_evm.TU.Sc2ySwM_369.398 Anthoceros agrestis HOM05D001069 ORTHO05D007586 8.0e-30 134.0 120 58.3
arahy.Tifrunner.gnm1.ann1.VQ2WN5 Arachis hypogaea HOM05D001069 ORTHO05D007586 4.4e-28 128.3 84 76.2
SMO356G0364 Selaginella moellendorffii HOM05D001069 ORTHO05D007586 7.5e-28 127.5 128 56.2
Mapoly0094s0008 Marchantia polymorpha HOM05D001069 ORTHO05D007586 9.8e-28 127.1 129 54.3
SHI18420 Sapria himalayana HOM05D001069 ORTHO05D007586 7.8e-25 117.5 87 67.8
MCO16G237 Micromonas commoda HOM05D001069 ORTHO05D007586 1.2e-20 103.6 116 47.4
Cre16.g671750 Chlamydomonas reinhardtii HOM05D001069 ORTHO05D007586 4.6e-17 91.7 121 44.6
TAR365G0807 Trochodendron aralioides HOM05D001069 ORTHO05D007586 8.6e-16 87.4 61 70.5
PRCOL_00003582 Prasinoderma coloniale HOM05D001069 ORTHO05D007586 1.1e-15 87.0 116 44.0
arahy.Tifrunner.gnm1.ann1.X5I3PL Arachis hypogaea HOM05D001069 ORTHO05D007586 3.4e-12 75.5 46 80.4
Sabra13G0038600 Salix brachista HOM05D000002 ORTHO05D000001 1.3e-08 63.5 57 63.2
arahy.Tifrunner.gnm1.ann1.VDJK8S Arachis hypogaea HOM05D001069 ORTHO05D007586 1.7e-08 63.2 89 43.8
arahy.Tifrunner.gnm1.ann1.JAH3YR Arachis hypogaea HOM05D001069 ORTHO05D007586 2.3e-08 62.8 34 85.3
TAR633G2811 Trochodendron aralioides HOM05D001069 ORTHO05D007586 2.3e-08 62.8 31 93.5
SHI18422 Sapria himalayana HOM05D001069 ORTHO05D007586 2.5e-07 59.3 40 72.5


User provided reference genes

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