Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01064 Erythranthe guttata HOM05D006327 ORTHO05D007952 2.1e-42 175.3 85 100.0
Migut.I00102 Erythranthe guttata HOM05D006327 ORTHO05D007952 2.7e-26 121.7 71 85.9
Manes.14G072700 Manihot esculenta HOM05D006327 ORTHO05D007952 5.5e-11 70.9 61 55.7
CSS0041426 Camellia sinensis var. sinensis HOM05D006327 ORTHO05D007952 9.4e-11 70.1 54 64.8
DCAR_021548 Daucus carota HOM05D006327 ORTHO05D007952 3.6e-10 68.2 73 53.4
Phvul.009G183700 Phaseolus vulgaris HOM05D006327 ORTHO05D007952 6.1e-10 67.4 65 52.3
Prupe.5G183400 Prunus persica HOM05D006327 ORTHO05D007952 7.9e-10 67.0 68 57.4
VMungo1309G2881 Vigna mungo HOM05D006327 ORTHO05D007952 7.9e-10 67.0 65 52.3
Dinv19897 Davidia involucrata HOM05D006327 ORTHO05D007952 1.4e-09 66.2 55 61.8
arahy.Tifrunner.gnm1.ann1.RDR8CP Arachis hypogaea HOM05D006327 ORTHO05D007952 3.0e-09 65.1 58 53.4
Cfa019028 Carpinus fangiana HOM05D006327 ORTHO05D007952 5.1e-09 64.3 64 53.1
CsaV3_1G001980 Cucumis sativus L. HOM05D006327 ORTHO05D007952 5.1e-09 64.3 62 53.2
Nn5g29803 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.1e-09 64.3 56 57.1
MD14G1190500 Malus domestica HOM05D006327 ORTHO05D007952 6.7e-09 63.9 54 63.0
Nn4g22987 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.7e-09 63.9 56 57.1
Nn5g29485 Nelumbo nucifera HOM05D006327 ORTHO05D007952 6.7e-09 63.9 56 57.1
Nn4g25043 Nelumbo nucifera HOM05D006327 ORTHO05D007952 8.8e-09 63.5 56 57.1
RcHm_v2.0_Chr7g0180141 Rosa chinensis HOM05D006327 ORTHO05D007952 8.8e-09 63.5 56 58.9
unitig_61.g26481 Utricularia gibba HOM05D006327 ORTHO05D007952 8.8e-09 63.5 52 63.5
Ciclev10020740m.g Citrus clementina HOM05D006327 ORTHO05D007952 1.1e-08 63.2 56 62.5
QL10p014464 Quercus lobata HOM05D006327 ORTHO05D007952 1.1e-08 63.2 62 51.6
Rhsim12G0160300 Rhododendron simsii HOM05D006327 ORTHO05D007952 1.1e-08 63.2 63 54.0
BcaB01g00870 Brassica carinata HOM05D006327 ORTHO05D007952 1.5e-08 62.8 57 57.9
FAN04G1419 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.9e-08 62.4 53 60.4
FAN18G0307 Fragaria x ananassa HOM05D006327 ORTHO05D007952 2.5e-08 62.0 62 53.2
Actinidia34971 Actinidia chinensis HOM05D006327 ORTHO05D007952 3.3e-08 61.6 41 70.7
Glyma.06G188300 Glycine max HOM05D006327 ORTHO05D007952 3.3e-08 61.6 65 50.8
Glyma.04G176800 Glycine max HOM05D006327 ORTHO05D007952 4.3e-08 61.2 41 65.9
Nn5g29700 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.7e-08 60.8 54 57.4
Nn6g34101 Nelumbo nucifera HOM05D006327 ORTHO05D007952 5.7e-08 60.8 56 55.4
Actinidia19065 Actinidia chinensis HOM05D006327 ORTHO05D007952 7.4e-08 60.5 53 60.4
SEGI_36963 Sequoiadendron giganteum HOM05D006327 ORTHO05D007952 7.4e-08 60.5 46 63.0
DCAR_016525 Daucus carota HOM05D006327 ORTHO05D007952 9.7e-08 60.1 40 67.5
CANSAT80G2449 Cannabis sativa HOM05D006327 ORTHO05D007952 1.3e-07 59.7 40 70.0
FAN08G2893 Fragaria x ananassa HOM05D006327 ORTHO05D007952 1.3e-07 59.7 62 51.6
Oeu035426.1 Olea europaea HOM05D006327 ORTHO05D007952 1.3e-07 59.7 56 53.6
PGR083G2875 Punica granatum HOM05D006327 ORTHO05D007952 1.3e-07 59.7 56 58.9
Thhalv10010485m.g Eutrema salsugineum HOM05D006327 ORTHO05D007952 1.7e-07 59.3 52 59.6
Nn2g11504 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.7e-07 59.3 56 53.6
Nn2g11507 Nelumbo nucifera HOM05D006327 ORTHO05D007952 1.7e-07 59.3 56 53.6
Psat5g181760 Pisum sativum HOM05D006327 ORTHO05D007952 1.7e-07 59.3 55 54.5
Sed0003639 Sechium edule HOM05D006327 ORTHO05D007952 1.7e-07 59.3 41 65.9
AL5G27170 Arabidopsis lyrata HOM05D006327 ORTHO05D007952 2.2e-07 58.9 57 57.9
AUR62008321 Chenopodium quinoa HOM05D006327 ORTHO05D007952 2.2e-07 58.9 66 51.5
MD06G1184600 Malus domestica HOM05D006327 ORTHO05D007952 2.2e-07 58.9 64 54.7
Sed0027580 Sechium edule HOM05D006327 ORTHO05D007952 2.2e-07 58.9 70 47.1
Cpa.g.c28309.3 Carica papaya HOM05D006327 ORTHO05D007952 2.8e-07 58.5 68 52.9
Haze_07403 Corylus avellana HOM05D006327 ORTHO05D007952 2.8e-07 58.5 41 61.0
Peaxi162Scf00689g00562 Petunia axillaris HOM05D006327 ORTHO05D007952 2.8e-07 58.5 71 49.3
vmacro16576 Vaccinium macrocarpon HOM05D006327 ORTHO05D007952 2.8e-07 58.5 41 65.9
A06p19780 Brassica napus HOM05D006327 ORTHO05D007952 3.7e-07 58.2 58 53.4
BraA06t25057Z Brassica rapa HOM05D006327 ORTHO05D007952 3.7e-07 58.2 58 53.4
AUR62021775 Chenopodium quinoa HOM05D006327 ORTHO05D007952 3.7e-07 58.2 63 52.4
ClCG06G016530 Citrullus lanatus HOM05D006327 ORTHO05D007952 3.7e-07 58.2 41 63.4
Lj9A456G27 Lonicera japonica HOM05D006327 ORTHO05D007952 3.7e-07 58.2 71 45.1
Potri.012G072600 Populus trichocarpa HOM05D006327 ORTHO05D007952 3.7e-07 58.2 65 47.7
TAR629G2492 Trochodendron aralioides HOM05D006327 ORTHO05D007952 3.7e-07 58.2 41 63.4
GSVIVG01008091001 Vitis vinifera HOM05D006327 ORTHO05D007952 3.7e-07 58.2 53 56.6
BolC1t03192H Brassica oleracea HOM05D006327 ORTHO05D007952 4.8e-07 57.8 54 55.6
CARHR156550 Cardamine hirsuta HOM05D006327 ORTHO05D007952 4.8e-07 57.8 57 56.1
FAN13G1795 Fragaria x ananassa HOM05D006327 ORTHO05D007952 4.8e-07 57.8 62 50.0
Gohir.A13G087700 Gossypium hirsutum HOM05D006327 ORTHO05D007952 4.8e-07 57.8 54 57.4
Lsat_1_v5_gn_5_17580 Lactuca sativa HOM05D006327 ORTHO05D007952 4.8e-07 57.8 40 62.5
Eucgr.B00389 Eucalyptus grandis HOM05D006327 ORTHO05D007952 6.3e-07 57.4 55 52.7
COL.COLO4_21256 Corchorus olitorius HOM05D006327 ORTHO05D007952 8.2e-07 57.0 41 63.4
MELO3C017142.2 Cucumis melo HOM05D006327 ORTHO05D007952 8.2e-07 57.0 40 62.5
BcaC01g01770 Brassica carinata HOM05D006327 ORTHO05D007952 1.1e-06 56.6 38 68.4
C03p72080 Brassica napus HOM05D006327 ORTHO05D007952 1.1e-06 56.6 38 68.4
BolC3t19506H Brassica oleracea HOM05D006327 ORTHO05D007952 1.1e-06 56.6 38 68.4
Gohir.D13G092100 Gossypium hirsutum HOM05D006327 ORTHO05D007952 1.1e-06 56.6 54 55.6
Gorai.010G139000 Gossypium raimondii HOM05D006327 ORTHO05D007952 1.1e-06 56.6 54 55.6
Nitab4.5_0000003g0110 Nicotiana tabacum HOM05D006327 ORTHO05D007952 1.1e-06 56.6 66 47.0
SGA_v2.0_scaffold56G20076 Striga asiatica HOM05D006327 ORTHO05D007952 1.1e-06 56.6 73 47.9
AT3G47850 Arabidopsis thaliana HOM05D006327 ORTHO05D007952 1.4e-06 56.2 38 68.4
arahy.Tifrunner.gnm1.ann1.Y9A7HY Arachis hypogaea HOM05D006327 ORTHO05D007952 1.4e-06 56.2 41 61.0
Sp5g14110 Schrenkiella parvula HOM05D006327 ORTHO05D007952 1.4e-06 56.2 52 57.7
FvH4_5g15910 Fragaria vesca HOM05D006327 ORTHO05D007952 1.8e-06 55.8 41 63.4
Sabra12G0051800 Salix brachista HOM05D006327 ORTHO05D007952 1.8e-06 55.8 65 49.2
Solyc06g071170.4 Solanum lycopersicum HOM05D006327 ORTHO05D007952 1.8e-06 55.8 43 60.5
Sopen06g027480 Solanum pennellii HOM05D006327 ORTHO05D007952 1.8e-06 55.8 43 60.5
Aqoxy3G03193 Aquilegia oxysepala HOM05D006327 ORTHO05D007952 2.4e-06 55.5 41 61.0
Duzib205G1023 Durio zibethinus HOM05D006327 ORTHO05D007952 2.4e-06 55.5 74 44.6
Aa31LG4G16510 Aethionema arabicum HOM05D006327 ORTHO05D007952 3.1e-06 55.1 59 47.5
Lalb_Chr11g0071521 Lupinus albus HOM05D006327 ORTHO05D007952 3.1e-06 55.1 68 44.1
PGSC0003DMG400033064 Solanum tuberosum HOM05D006327 ORTHO05D007952 3.1e-06 55.1 43 60.5
HanXRQChr02g0045371 Helianthus annuus HOM05D006327 ORTHO05D007952 4.1e-06 54.7 62 46.8
Lj1g0017631 Lotus japonicus HOM05D006327 ORTHO05D007952 4.1e-06 54.7 39 64.1
TWI81G1080 Tripterygium wilfordii HOM05D006327 ORTHO05D007952 4.1e-06 54.7 60 48.3
Medtr0168s0110 Medicago truncatula HOM05D006327 ORTHO05D007952 5.3e-06 54.3 40 62.5
CiPaw.12G020800 Carya illinoinensis HOM05D006327 ORTHO05D007952 6.9e-06 53.9 41 63.4


User provided reference genes

Program Settings