Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 3.4e-46 188.0 94 100.0
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 3.4e-46 188.0 94 100.0
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.7e-42 175.6 91 95.6
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 5.3e-39 164.1 91 86.8
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 5.3e-39 164.1 90 87.8
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 6.9e-39 163.7 91 86.8
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 9.0e-39 163.3 91 85.7
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 9.0e-39 163.3 91 87.9
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 9.0e-39 163.3 91 85.7
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 9.0e-39 163.3 91 85.7
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.5e-38 162.5 91 86.8
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 2.6e-38 161.8 90 84.4
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 2.6e-38 161.8 91 84.6
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 2.6e-38 161.8 91 84.6
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 2.6e-38 161.8 91 83.5
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 3.4e-38 161.4 91 84.6
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 4.5e-38 161.0 91 84.6
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 4.5e-38 161.0 91 85.7
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 9.9e-38 159.8 91 85.7
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 9.9e-38 159.8 91 85.7
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 9.9e-38 159.8 91 85.7
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 1.3e-37 159.5 91 84.6
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 1.3e-37 159.5 90 86.7
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 1.7e-37 159.1 90 85.6
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 1.7e-37 159.1 91 83.5
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 2.2e-37 158.7 91 85.7
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 3.8e-37 157.9 91 83.5
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 3.8e-37 157.9 91 83.5
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 4.9e-37 157.5 91 82.4
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 4.9e-37 157.5 91 82.4
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 6.4e-37 157.1 90 84.4
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 6.4e-37 157.1 90 84.4
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 6.4e-37 157.1 90 84.4
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 1.1e-36 156.4 87 86.2
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 1.4e-36 156.0 90 83.3
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 1.4e-36 156.0 91 83.5
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 1.4e-36 156.0 90 83.3
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 1.4e-36 156.0 91 83.5
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 1.9e-36 155.6 91 81.3
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 2.4e-36 155.2 91 83.5
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 3.2e-36 154.8 90 82.2
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 3.2e-36 154.8 91 80.2
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 4.2e-36 154.5 91 81.3
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 5.4e-36 154.1 92 79.3
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 7.1e-36 153.7 91 80.2
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 7.1e-36 153.7 91 79.1
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 7.1e-36 153.7 91 82.4
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 7.1e-36 153.7 90 82.2
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 9.3e-36 153.3 91 81.3
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 1.2e-35 152.9 88 83.0
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 1.2e-35 152.9 90 82.2
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 1.6e-35 152.5 90 77.8
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 2.1e-35 152.1 90 80.0
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 2.7e-35 151.8 90 77.8
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 4.6e-35 151.0 91 78.0
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 6.0e-35 150.6 91 78.0
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 6.0e-35 150.6 88 80.7
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 7.9e-35 150.2 91 78.0
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 1.0e-34 149.8 91 76.9
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 1.3e-34 149.4 88 79.5
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 1.3e-34 149.4 91 76.9
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 1.8e-34 149.1 91 75.8
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.8e-34 149.1 90 80.0
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 2.3e-34 148.7 86 80.2
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.0e-34 148.3 84 84.5
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 3.0e-34 148.3 88 79.5
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 5.1e-34 147.5 91 76.9
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 5.1e-34 147.5 91 76.9
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 5.1e-34 147.5 91 76.9
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 5.1e-34 147.5 90 75.6
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 5.1e-34 147.5 90 75.6
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 8.7e-34 146.7 84 83.3
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 1.1e-33 146.4 91 75.8
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 1.1e-33 146.4 91 75.8
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 1.1e-33 146.4 91 75.8
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 1.1e-33 146.4 91 75.8
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 1.1e-33 146.4 90 75.6
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 1.1e-33 146.4 91 75.8
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 1.5e-33 146.0 90 76.7
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 1.9e-33 145.6 88 77.3
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 1.9e-33 145.6 91 75.8
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 1.9e-33 145.6 88 76.1
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 2.5e-33 145.2 91 74.7
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 4.3e-33 144.4 91 74.7
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 4.3e-33 144.4 91 74.7
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 4.3e-33 144.4 91 74.7
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 4.3e-33 144.4 91 74.7
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 5.6e-33 144.1 91 74.7
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 5.6e-33 144.1 91 74.7
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 5.6e-33 144.1 91 74.7
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 9.6e-33 143.3 91 76.9
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 1.3e-32 142.9 89 75.3
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 2.1e-32 142.1 90 76.7
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 8.1e-32 140.2 93 76.3
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 1.8e-31 139.0 91 72.5
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 1.8e-31 139.0 91 72.5
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 2.6e-30 135.2 82 78.0
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 5.8e-30 134.0 134 53.7
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 1.7e-29 132.5 91 74.7
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 6.4e-29 130.6 91 69.2
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 6.4e-29 130.6 91 69.2
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.9e-28 129.0 91 74.7
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 2.5e-28 128.6 120 58.3
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 5.5e-28 127.5 119 56.3
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 1.2e-27 126.3 143 53.1
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 3.3e-25 118.2 73 75.3
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 5.6e-25 117.5 66 83.3
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 7.4e-25 117.1 66 83.3
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 3.7e-24 114.8 66 81.8
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 1.8e-23 112.5 118 56.8
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 5.3e-23 110.9 66 77.3
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 1.5e-22 109.4 65 78.5
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 3.4e-22 108.2 96 60.4
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 3.2e-20 101.7 95 62.1
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 3.2e-20 101.7 60 78.3
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 1.2e-19 99.8 89 61.8
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 1.3e-18 96.3 58 75.9
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 6.3e-16 87.4 83 49.4
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 6.9e-15 84.0 265 28.3
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 1.2e-14 83.2 84 47.6
BraA01t03642Z Brassica rapa HOM05D006364 ORTHO05D007968 2.0e-14 82.4 71 60.6
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 4.5e-14 81.3 69 52.2
A01p35610 Brassica napus HOM05D006364 ORTHO05D007968 1.7e-13 79.3 71 59.2
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 4.6e-11 71.2 66 59.1
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 8.8e-10 67.0 56 60.7
MCO05G593 Micromonas commoda HOM05D006364 ORTHO05D007968 8.2e-08 60.5 69 40.6
Cre14.g626250 Chlamydomonas reinhardtii HOM05D006364 ORTHO05D007968 1.8e-07 59.3 63 44.4
Ciclev10027020m.g Citrus clementina HOM05D006364 ORTHO05D007968 3.1e-07 58.5 134 35.8
SalBow3G2548 Salvia bowleyana HOM05D006364 ORTHO05D007968 3.1e-07 58.5 63 42.9
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 6.9e-07 57.4 56 55.4


User provided reference genes

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