Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00982 Erythranthe guttata HOM05D009680 ORTHO05D000653 1.2e-51 206.1 91 100.0
Migut.H02350 Erythranthe guttata HOM05D009680 ORTHO05D000653 9.3e-41 169.9 91 82.4
Migut.C00659 Erythranthe guttata HOM05D001004 ORTHO05D000653 3.0e-23 111.7 87 56.3
Migut.L00816 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.3e-22 107.8 84 58.3
Migut.C00658 Erythranthe guttata HOM05D001004 ORTHO05D000653 3.7e-21 104.8 87 50.6
Migut.C00655 Erythranthe guttata HOM05D009680 ORTHO05D000653 6.3e-21 104.0 92 51.1
Migut.F00732 Erythranthe guttata HOM05D001004 ORTHO05D000653 5.3e-20 100.9 82 54.9
Migut.D01298 Erythranthe guttata HOM05D009680 ORTHO05D000653 2.0e-19 99.0 84 54.8
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 2.5e-17 92.0 86 51.2
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 2.5e-17 92.0 88 46.6
Cfa010162 Carpinus fangiana HOM05D009680 ORTHO05D000653 2.7e-16 88.6 89 46.1
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 3.6e-16 88.2 85 49.4
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 2.3e-15 85.5 85 47.1
SGA_v2.0_scaffold14G07008 Striga asiatica HOM05D000760 ORTHO05D000618 2.3e-15 85.5 84 48.8
Duzib114G0002 Durio zibethinus HOM05D001004 ORTHO05D000653 1.1e-14 83.2 87 46.0
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 5.7e-14 80.9 85 47.1
TAR376G0093 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.3e-13 79.7 87 42.5
Oeu017850.1 Olea europaea HOM05D001004 ORTHO05D000653 2.8e-13 78.6 85 43.5
Oeu017848.1 Olea europaea HOM05D001004 ORTHO05D000653 3.7e-13 78.2 85 42.4
Gohir.A05G281800 Gossypium hirsutum HOM05D001004 ORTHO05D000653 1.8e-12 75.9 87 40.2
CARHR155530 Cardamine hirsuta HOM05D009680 ORTHO05D000653 2.4e-12 75.5 73 49.3
ClCG02G012910 Citrullus lanatus HOM05D001004 ORTHO05D000653 2.4e-12 75.5 86 43.0
Gohir.D05G283088 Gossypium hirsutum HOM05D001004 ORTHO05D000653 4.1e-12 74.7 87 40.2
Gorai.009G297200 Gossypium raimondii HOM05D001004 ORTHO05D000653 4.1e-12 74.7 87 40.2
Gorai.009G297300 Gossypium raimondii HOM05D001004 ORTHO05D000653 4.1e-12 74.7 87 39.1
Gorai.009G297400 Gossypium raimondii HOM05D001004 ORTHO05D000653 4.1e-12 74.7 87 40.2
COL.COLO4_35913 Corchorus olitorius HOM05D001004 ORTHO05D000653 5.3e-12 74.3 91 40.7
MELO3C034586.2 Cucumis melo HOM05D001004 ORTHO05D000653 6.9e-12 73.9 85 40.0
Gohir.A05G281700 Gossypium hirsutum HOM05D001004 ORTHO05D000653 9.1e-12 73.6 87 39.1
MELO3C000685.2 Cucumis melo HOM05D001004 ORTHO05D000653 1.2e-11 73.2 84 34.5
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.2e-11 73.2 89 44.9
Cc07_g18340 Coffea canephora HOM05D001004 ORTHO05D000653 2.0e-11 72.4 92 44.6
Eucgr.F00211 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.5e-11 71.2 76 43.4
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.3e-10 69.7 84 41.7
Eucgr.D01653 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.7e-10 69.3 84 40.5
Peaxi162Scf00620g00054 Petunia axillaris HOM05D009680 ORTHO05D010443 1.7e-10 69.3 89 42.7
AT3G46860 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 2.9e-10 68.6 85 37.6
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 3.8e-10 68.2 88 39.8
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 3.8e-10 68.2 86 38.4
BolC3t14835H Brassica oleracea HOM05D001004 ORTHO05D000653 8.5e-10 67.0 84 38.1
CARHR155430 Cardamine hirsuta HOM05D001004 ORTHO05D000653 1.1e-09 66.6 86 38.4
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 1.1e-09 66.6 88 40.9
CiPaw.01G189600 Carya illinoinensis HOM05D001004 ORTHO05D000653 1.9e-09 65.9 74 43.2
Sopen08g028370 Solanum pennellii HOM05D000015 ORTHO05D000803 3.2e-09 65.1 87 41.4
Eucgr.B01966 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.2e-09 64.7 88 37.5
PGSC0003DMG400005142 Solanum tuberosum HOM05D009680 ORTHO05D010443 4.2e-09 64.7 85 43.5
Eucgr.H05147 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.5e-09 64.3 85 38.8
Medtr5g090250 Medicago truncatula HOM05D001004 ORTHO05D000653 5.5e-09 64.3 74 40.5
Oeu017852.1 Olea europaea HOM05D001004 ORTHO05D000653 9.4e-09 63.5 86 37.2
Migut.A00977 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.2e-08 63.2 74 43.2
Migut.A00975 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.6e-08 62.8 74 43.2
Oeu032586.1 Olea europaea HOM05D001004 ORTHO05D000653 1.6e-08 62.8 74 41.9
TPR.G31261 Trifolium pratense HOM05D001004 ORTHO05D000653 1.6e-08 62.8 75 38.7
Eucgr.B01872 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.7e-08 62.0 88 37.5
Peaxi162Scf01517g00130 Petunia axillaris HOM05D009680 ORTHO05D010443 2.7e-08 62.0 89 44.9
CAN.G1513.6 Capsicum annuum HOM05D009680 ORTHO05D010443 3.6e-08 61.6 85 38.8
MELO3C020883.2 Cucumis melo HOM05D001004 ORTHO05D000653 4.7e-08 61.2 64 43.8
Medtr1g075410 Medicago truncatula HOM05D001004 ORTHO05D000653 4.7e-08 61.2 72 40.3
COL.COLO4_12159 Corchorus olitorius HOM05D001004 ORTHO05D000653 6.1e-08 60.8 74 39.2
Haze_10651 Corylus avellana HOM05D001004 ORTHO05D000653 6.1e-08 60.8 57 42.1
CAN.G630.2 Capsicum annuum HOM05D009680 ORTHO05D000653 7.9e-08 60.5 86 38.4
Cc03_g04970 Coffea canephora HOM05D001004 ORTHO05D000653 7.9e-08 60.5 61 41.0
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.4e-07 59.7 89 34.8
Lalb_Chr21g0312251 Lupinus albus HOM05D001004 ORTHO05D000653 1.4e-07 59.7 72 36.1
Psat4g107840 Pisum sativum HOM05D001004 ORTHO05D000653 1.4e-07 59.7 72 37.5
CsaV3_2G017000 Cucumis sativus L. HOM05D001004 ORTHO05D000653 1.8e-07 59.3 64 40.6
MD13G1208300 Malus domestica HOM05D001004 ORTHO05D000653 1.8e-07 59.3 74 37.8
RcHm_v2.0_Chr2g0105871 Rosa chinensis HOM05D001004 ORTHO05D000653 1.8e-07 59.3 88 38.6
PGSC0003DMG400026952 Solanum tuberosum HOM05D009680 ORTHO05D010443 1.8e-07 59.3 91 41.8
Glyma.10G184700 Glycine max HOM05D001004 ORTHO05D000653 2.3e-07 58.9 74 36.5
Peaxi162Scf00620g00517 Petunia axillaris HOM05D009680 ORTHO05D010443 2.3e-07 58.9 88 42.0
Sabra10G0033100 Salix brachista HOM05D001004 ORTHO05D000653 2.3e-07 58.9 61 42.6
Sabra10G0033300 Salix brachista HOM05D001004 ORTHO05D000653 2.3e-07 58.9 61 42.6
Sabra10G0033500 Salix brachista HOM05D001004 ORTHO05D000653 2.3e-07 58.9 61 42.6
Glyma.20G205700 Glycine max HOM05D001004 ORTHO05D000653 3.0e-07 58.5 74 35.1
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 3.0e-07 58.5 84 36.9
CiPaw.01G189700 Carya illinoinensis HOM05D001004 ORTHO05D000653 3.9e-07 58.2 80 37.5
FvH4_1g16190 Fragaria vesca HOM05D001004 ORTHO05D000653 3.9e-07 58.2 89 37.1
FAN26G2526 Fragaria x ananassa HOM05D001004 ORTHO05D000653 3.9e-07 58.2 89 37.1
Potri.010G075800 Populus trichocarpa HOM05D001004 ORTHO05D000653 3.9e-07 58.2 61 42.6
AUR62011909 Chenopodium quinoa HOM05D001004 ORTHO05D000653 5.1e-07 57.8 75 38.7
Haze_19482 Corylus avellana HOM05D001004 ORTHO05D000653 5.1e-07 57.8 74 39.2
QL06p015871 Quercus lobata HOM05D001004 ORTHO05D000653 5.1e-07 57.8 74 36.5
AUR62032224 Chenopodium quinoa HOM05D001004 ORTHO05D000653 6.7e-07 57.4 74 37.8
FAN28G2625 Fragaria x ananassa HOM05D001004 ORTHO05D000653 6.7e-07 57.4 82 40.2
Peaxi162Scf00897g00113 Petunia axillaris HOM05D000048 ORTHO05D000207 6.7e-07 57.4 62 46.8
Peaxi162Scf79264g00001 Petunia axillaris HOM05D008628 ORTHO05D010443 6.7e-07 57.4 62 46.8
Potri.010G075501 Populus trichocarpa HOM05D001004 ORTHO05D000653 6.7e-07 57.4 61 42.6
QL06p015886 Quercus lobata HOM05D001004 ORTHO05D000653 6.7e-07 57.4 71 36.6
Solyc11g007050.1 Solanum lycopersicum HOM05D009680 ORTHO05D000653 6.7e-07 57.4 85 40.0
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 8.8e-07 57.0 85 37.6
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 8.8e-07 57.0 85 37.6
CSS0013364 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 8.8e-07 57.0 71 39.4
Lalb_Chr21g0312271 Lupinus albus HOM05D001004 ORTHO05D000653 8.8e-07 57.0 72 37.5
Medtr1g075340 Medicago truncatula HOM05D001004 ORTHO05D000653 8.8e-07 57.0 74 36.5
Peaxi162Scf00325g00711 Petunia axillaris HOM05D001004 ORTHO05D000653 8.8e-07 57.0 72 38.9
Potri.010G075300 Populus trichocarpa HOM05D001004 ORTHO05D000653 8.8e-07 57.0 61 42.6
CAN.G630.4 Capsicum annuum HOM05D009680 ORTHO05D010443 1.1e-06 56.6 88 36.4
Migut.A00978 Erythranthe guttata HOM05D001004 ORTHO05D000653 1.1e-06 56.6 74 39.2
SalBow6G5398 Salvia bowleyana HOM05D001004 ORTHO05D000653 1.1e-06 56.6 61 39.3
TPR.G9059 Trifolium pratense HOM05D001004 ORTHO05D000653 1.1e-06 56.6 71 38.0
TAR636G3448 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.1e-06 56.6 72 38.9
Actinidia05460 Actinidia chinensis HOM05D001004 ORTHO05D000653 1.5e-06 56.2 74 36.5
arahy.Tifrunner.gnm1.ann1.T5EZBY Arachis hypogaea HOM05D001004 ORTHO05D000653 1.5e-06 56.2 61 37.7
AUR62006913 Chenopodium quinoa HOM05D001004 ORTHO05D000653 1.5e-06 56.2 87 34.5
Dinv44642 Davidia involucrata HOM05D001004 ORTHO05D000653 1.5e-06 56.2 74 39.2
Eucgr.F00210 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.5e-06 56.2 87 35.6
Glyma.20G205900 Glycine max HOM05D001004 ORTHO05D000653 2.0e-06 55.8 61 42.6
Nitab4.5_0000014g0490 Nicotiana tabacum HOM05D009680 ORTHO05D010443 2.0e-06 55.8 86 36.0
SalBow6G2951 Salvia bowleyana HOM05D001004 ORTHO05D000653 2.0e-06 55.8 71 38.0
Sopen11g002970 Solanum pennellii HOM05D009680 ORTHO05D000653 2.0e-06 55.8 86 39.5
Dinv44644 Davidia involucrata HOM05D001004 ORTHO05D000653 2.6e-06 55.5 74 37.8
Nn1g02639 Nelumbo nucifera HOM05D001004 ORTHO05D000653 2.6e-06 55.5 74 36.5
SalBow6G5314 Salvia bowleyana HOM05D001004 ORTHO05D000653 2.6e-06 55.5 74 40.5
Thecc.10G077700 Theobroma cacao HOM05D001004 ORTHO05D000653 2.6e-06 55.5 74 37.8
Actinidia08437 Actinidia chinensis HOM05D001004 ORTHO05D000653 3.3e-06 55.1 74 33.8
CSS0028717 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 3.3e-06 55.1 72 37.5
Dinv44643 Davidia involucrata HOM05D001004 ORTHO05D000653 3.3e-06 55.1 61 39.3
Medtr1g070335 Medicago truncatula HOM05D001004 ORTHO05D000653 3.3e-06 55.1 71 35.2
Carub.0004s2089 Capsella rubella HOM05D001004 ORTHO05D000653 4.4e-06 54.7 74 37.8
COL.COLO4_05577 Corchorus olitorius HOM05D001004 ORTHO05D000653 4.4e-06 54.7 61 37.7
Migut.A00979 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.4e-06 54.7 75 37.3
Psat2g130960 Pisum sativum HOM05D001004 ORTHO05D000653 4.4e-06 54.7 61 36.1
RcHm_v2.0_Chr4g0390831 Rosa chinensis HOM05D001004 ORTHO05D000653 4.4e-06 54.7 61 42.6
Thecc.10G078100 Theobroma cacao HOM05D001004 ORTHO05D000653 4.4e-06 54.7 74 37.8
Atru.chr4.2206 Acer truncatum HOM05D001004 ORTHO05D000653 5.7e-06 54.3 61 39.3
CSS0007138 Camellia sinensis var. sinensis HOM05D001004 ORTHO05D000653 5.7e-06 54.3 61 41.0
Potri.009G028300 Populus trichocarpa HOM05D001004 ORTHO05D000653 5.7e-06 54.3 61 39.3
Sed0016936 Sechium edule HOM05D001004 ORTHO05D000653 5.7e-06 54.3 65 35.4
arahy.Tifrunner.gnm1.ann1.KV3BZC Arachis hypogaea HOM05D001004 ORTHO05D000653 7.4e-06 53.9 61 36.1
Eucgr.I00166 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.4e-06 53.9 61 39.3
Medtr5g045470 Medicago truncatula HOM05D001004 ORTHO05D000653 7.4e-06 53.9 61 39.3
Nn3g18475 Nelumbo nucifera HOM05D001004 ORTHO05D000653 7.4e-06 53.9 74 37.8
PGR102G1398 Punica granatum HOM05D001004 ORTHO05D000653 7.4e-06 53.9 61 34.4
SalBow6G5036 Salvia bowleyana HOM05D001004 ORTHO05D000653 7.4e-06 53.9 61 39.3
Actinidia08436 Actinidia chinensis HOM05D001004 ORTHO05D000653 9.7e-06 53.5 74 32.4
AT5G43580 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 9.7e-06 53.5 61 32.8
Haze_11314 Corylus avellana HOM05D001004 ORTHO05D000653 9.7e-06 53.5 74 36.5
HanXRQChr13g0424431 Helianthus annuus HOM05D001004 ORTHO05D000653 9.7e-06 53.5 61 37.7
Nitab4.5_0000302g0080 Nicotiana tabacum HOM05D001004 ORTHO05D000653 9.7e-06 53.5 61 39.3
Phvul.009G203600 Phaseolus vulgaris HOM05D001004 ORTHO05D000653 9.7e-06 53.5 61 37.7
Sabra10G0033600 Salix brachista HOM05D001004 ORTHO05D000653 9.7e-06 53.5 61 39.3
SalBow6G3365 Salvia bowleyana HOM05D001004 ORTHO05D000653 9.7e-06 53.5 61 39.3


User provided reference genes

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