Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00916 Erythranthe guttata HOM05D005160 ORTHO05D006127 9.5e-59 229.9 114 100.0
Migut.B00095 Erythranthe guttata HOM05D005160 ORTHO05D006127 2.6e-40 168.7 90 93.3
Migut.N03290 Erythranthe guttata HOM05D005160 ORTHO05D006127 1.1e-38 163.3 90 91.1
Oeu014453.1 Olea europaea HOM05D005160 ORTHO05D006127 3.6e-34 148.3 90 80.0
SalBow1G7891 Salvia bowleyana HOM05D005160 ORTHO05D006127 2.0e-32 142.5 86 82.6
MSTRG.16896 Avicennia marina HOM05D005160 ORTHO05D006127 9.2e-30 133.7 88 77.3
Hma1.2p1_0163F.1_g072320 Hydrangea macrophylla HOM05D005160 ORTHO05D006127 3.5e-29 131.7 89 74.2
SGA_v2.0_scaffold58G20392 Striga asiatica HOM05D005160 ORTHO05D006127 6.0e-29 131.0 90 72.2
Aqoxy5G01804 Aquilegia oxysepala HOM05D005160 ORTHO05D006127 1.3e-28 129.8 88 73.9
Rhsim11G0191300 Rhododendron simsii HOM05D005160 ORTHO05D006127 1.7e-28 129.4 89 73.0
Nn5g30735 Nelumbo nucifera HOM05D005160 ORTHO05D006127 3.0e-28 128.6 87 74.7
FvH4_2g01450 Fragaria vesca HOM05D005160 ORTHO05D006127 1.9e-27 125.9 86 74.4
FAN15G3563 Fragaria x ananassa HOM05D005160 ORTHO05D006127 1.9e-27 125.9 86 74.4
FAN24G2272 Fragaria x ananassa HOM05D005160 ORTHO05D006127 1.9e-27 125.9 86 74.4
Lj9A392T37 Lonicera japonica HOM05D005160 ORTHO05D006127 1.9e-27 125.9 88 69.3
TAR381G1224 Trochodendron aralioides HOM05D005160 ORTHO05D006127 1.9e-27 125.9 89 71.9
Phvul.011G034500 Phaseolus vulgaris HOM05D005160 ORTHO05D006127 4.3e-27 124.8 86 74.4
Thecc.02G062800 Theobroma cacao HOM05D005160 ORTHO05D006127 4.3e-27 124.8 86 72.1
TPR.G40783 Trifolium pratense HOM05D005160 ORTHO05D006127 4.3e-27 124.8 84 75.0
RcHm_v2.0_Chr6g0244091 Rosa chinensis HOM05D005160 ORTHO05D006127 5.6e-27 124.4 86 73.3
FAN20G0465 Fragaria x ananassa HOM05D005160 ORTHO05D006127 7.3e-27 124.0 86 73.3
FAN27G2227 Fragaria x ananassa HOM05D005160 ORTHO05D006127 7.3e-27 124.0 86 73.3
VMungo1127G1693 Vigna mungo HOM05D005160 ORTHO05D006127 9.6e-27 123.6 75 80.0
Glyma.11G106500 Glycine max HOM05D005160 ORTHO05D006127 1.2e-26 123.2 86 73.3
GSVIVG01024045001 Vitis vinifera HOM05D005160 ORTHO05D006127 1.2e-26 123.2 86 72.1
Prupe.8G163700 Prunus persica HOM05D005160 ORTHO05D006127 1.6e-26 122.9 75 78.7
QL11p049938 Quercus lobata HOM05D005160 ORTHO05D006127 1.6e-26 122.9 84 71.4
Thecc.02G062500 Theobroma cacao HOM05D005160 ORTHO05D006127 1.6e-26 122.9 86 72.1
Cc02_g16320 Coffea canephora HOM05D005160 ORTHO05D006127 2.8e-26 122.1 90 65.6
Glyma.12G031600 Glycine max HOM05D005160 ORTHO05D006127 2.8e-26 122.1 86 72.1
CSS0048155 Camellia sinensis var. sinensis HOM05D005160 ORTHO05D006127 4.7e-26 121.3 91 70.3
MELO3C020808.2 Cucumis melo HOM05D005160 ORTHO05D006127 8.1e-26 120.6 88 69.3
MBI09_g14140_MAGBIO Magnolia biondii HOM05D005160 ORTHO05D006127 8.1e-26 120.6 90 68.9
Medtr4g073620 Medicago truncatula HOM05D005160 ORTHO05D006127 8.1e-26 120.6 86 72.1
Lj3g0012456 Lotus japonicus HOM05D005160 ORTHO05D006127 1.1e-25 120.2 75 78.7
CsaV3_2G015970 Cucumis sativus L. HOM05D005160 ORTHO05D006127 1.4e-25 119.8 88 69.3
vmacro02269 Vaccinium macrocarpon HOM05D005160 ORTHO05D006127 1.4e-25 119.8 90 70.0
MD05G1119500 Malus domestica HOM05D005160 ORTHO05D006127 1.8e-25 119.4 76 77.6
Psat7g175760 Pisum sativum HOM05D005160 ORTHO05D006127 1.8e-25 119.4 86 72.1
Duzib132G0556 Durio zibethinus HOM05D005160 ORTHO05D006127 2.4e-25 119.0 82 73.2
Duzib052G1050 Durio zibethinus HOM05D005160 ORTHO05D006127 3.1e-25 118.6 86 68.6
MD10G1123200 Malus domestica HOM05D005160 ORTHO05D006127 3.1e-25 118.6 76 73.7
PSO170G2472 Papaver somniferum HOM05D005160 ORTHO05D006127 4.0e-25 118.2 90 67.8
Peaxi162Scf00362g00839 Petunia axillaris HOM05D005160 ORTHO05D006127 4.0e-25 118.2 88 67.0
TWI31G1222 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 4.0e-25 118.2 82 73.2
Cfa005223 Carpinus fangiana HOM05D005160 ORTHO05D006127 5.2e-25 117.9 74 73.0
HanXRQChr17g0543921 Helianthus annuus HOM05D005160 ORTHO05D006127 6.9e-25 117.5 90 64.4
SGA_v2.0_scaffold32G13272 Striga asiatica HOM05D005160 ORTHO05D006127 6.9e-25 117.5 87 69.0
Atru.chr5.3293 Acer truncatum HOM05D005160 ORTHO05D006127 8.9e-25 117.1 84 66.7
Ca_19053_v3 Cicer arietinum L. HOM05D005160 ORTHO05D006127 8.9e-25 117.1 86 69.8
Sc08g0003030 Simmondsia chinensis HOM05D005160 ORTHO05D006127 8.9e-25 117.1 90 64.4
Cpa.g.sc37.160 Carica papaya HOM05D005160 ORTHO05D006127 1.5e-24 116.3 88 68.2
Nitab4.5_0005837g0020 Nicotiana tabacum HOM05D005160 ORTHO05D006127 1.5e-24 116.3 88 63.6
Haze_02160 Corylus avellana HOM05D005160 ORTHO05D006127 2.0e-24 115.9 74 70.3
Sopen01g053440 Solanum pennellii HOM05D005160 ORTHO05D006127 2.0e-24 115.9 90 64.4
Nitab4.5_0001891g0030 Nicotiana tabacum HOM05D005160 ORTHO05D006127 2.6e-24 115.5 88 65.9
THA.LOC104824770 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 2.6e-24 115.5 86 67.4
Solyc01g111370.3 Solanum lycopersicum HOM05D005160 ORTHO05D006127 3.4e-24 115.2 90 64.4
CAN.G588.54 Capsicum annuum HOM05D005160 ORTHO05D006127 5.8e-24 114.4 90 63.3
PSO700G0063 Papaver somniferum HOM05D005160 ORTHO05D006127 5.8e-24 114.4 90 65.6
Sed0006607 Sechium edule HOM05D005160 ORTHO05D006127 7.6e-24 114.0 76 73.7
ClCG02G011810 Citrullus lanatus HOM05D005160 ORTHO05D006127 9.9e-24 113.6 75 72.0
Ciclev10028126m.g Citrus clementina HOM05D005160 ORTHO05D006127 9.9e-24 113.6 75 76.0
Lalb_Chr03g0025091 Lupinus albus HOM05D005160 ORTHO05D006127 1.3e-23 113.2 75 73.3
Gohir.A01G166700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 1.7e-23 112.8 85 65.9
Sp7g37140 Schrenkiella parvula HOM05D005160 ORTHO05D006127 1.7e-23 112.8 71 76.1
PGSC0003DMG402006199 Solanum tuberosum HOM05D005160 ORTHO05D006127 1.7e-23 112.8 90 62.2
Aa31LG6G16530 Aethionema arabicum HOM05D005160 ORTHO05D006127 2.2e-23 112.5 71 77.5
Eucgr.I01400 Eucalyptus grandis HOM05D005160 ORTHO05D006127 3.8e-23 111.7 85 65.9
DCAR_003159 Daucus carota HOM05D005160 ORTHO05D006127 4.9e-23 111.3 76 67.1
Manes.04G073300 Manihot esculenta HOM05D005160 ORTHO05D006127 4.9e-23 111.3 88 61.4
Thhalv10024826m.g Eutrema salsugineum HOM05D005160 ORTHO05D006127 6.4e-23 110.9 71 76.1
Lsat_1_v5_gn_3_46280 Lactuca sativa HOM05D005160 ORTHO05D006127 1.1e-22 110.2 77 66.2
Gohir.D01G157700 Gossypium hirsutum HOM05D005160 ORTHO05D006127 1.4e-22 109.8 85 63.5
Gorai.002G195800 Gossypium raimondii HOM05D005160 ORTHO05D006127 1.4e-22 109.8 85 63.5
AT4G38640 Arabidopsis thaliana HOM05D005160 ORTHO05D006127 2.4e-22 109.0 71 76.1
Potri.009G132900 Populus trichocarpa HOM05D005160 ORTHO05D006127 2.4e-22 109.0 76 68.4
AL7G10530 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 4.2e-22 108.2 71 71.8
Lalb_Chr01g0001791 Lupinus albus HOM05D005160 ORTHO05D006127 4.2e-22 108.2 80 66.2
BcaB03g12216 Brassica carinata HOM05D005160 ORTHO05D006127 5.4e-22 107.8 74 70.3
Carub.0007s0051 Capsella rubella HOM05D005160 ORTHO05D006127 5.4e-22 107.8 71 73.2
EL10Ac9g21400 Beta vulgaris HOM05D005160 ORTHO05D006127 7.1e-22 107.5 90 58.9
Hund06424 Selenicereus undatus HOM05D005160 ORTHO05D006127 7.1e-22 107.5 90 57.8
ATR0579G151 Amborella trichopoda HOM05D005160 ORTHO05D006127 9.3e-22 107.1 87 66.7
Potri.004G173600 Populus trichocarpa HOM05D005160 ORTHO05D006127 9.3e-22 107.1 88 62.5
CiPaw.05G080400 Carya illinoinensis HOM05D005160 ORTHO05D006127 1.6e-21 106.3 76 67.1
CARHR294360 Cardamine hirsuta HOM05D005160 ORTHO05D006127 2.1e-21 105.9 71 71.8
CDE02G2386 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 2.1e-21 105.9 86 64.0
HPP92_025488 Vanilla planifolia HOM05D005160 ORTHO05D006127 2.1e-21 105.9 86 61.6
A08p24110 Brassica napus HOM05D005160 ORTHO05D006127 2.7e-21 105.5 71 70.4
CDE04G1868 Ceratophyllum demersum HOM05D005160 ORTHO05D006127 3.5e-21 105.1 75 72.0
BcaC01g00246 Brassica carinata HOM05D005160 ORTHO05D006127 7.8e-21 104.0 71 70.4
C03p77200 Brassica napus HOM05D005160 ORTHO05D006127 7.8e-21 104.0 71 70.4
BolC3t19975H Brassica oleracea HOM05D005160 ORTHO05D006127 7.8e-21 104.0 71 70.4
THA.LOC104804092 Tarenaya hassleriana HOM05D005160 ORTHO05D006127 1.0e-20 103.6 75 68.0
TWI75G0220 Tripterygium wilfordii HOM05D005160 ORTHO05D006127 8.7e-20 100.5 80 63.8
AUR62013051 Chenopodium quinoa HOM05D005160 ORTHO05D006127 4.3e-19 98.2 75 61.3
AUR62010059 Chenopodium quinoa HOM05D005160 ORTHO05D006127 5.6e-19 97.8 74 62.2
Ah.01g022840 Amaranthus hybridus HOM05D005160 ORTHO05D006127 9.6e-19 97.1 88 52.3
COL.COLO4_17310 Corchorus olitorius HOM05D005160 ORTHO05D006127 3.6e-18 95.1 65 70.8
SEGI_02117 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 1.1e-17 93.6 77 54.5
SEGI_18476 Sequoiadendron giganteum HOM05D005160 ORTHO05D006127 3.1e-17 92.0 75 60.0
Actinidia20505 Actinidia chinensis HOM05D005160 ORTHO05D006127 9.0e-17 90.5 57 77.2
Sabra09G0103200 Salix brachista HOM05D005160 ORTHO05D006127 9.0e-17 90.5 65 66.2
Dinv41951 Davidia involucrata HOM05D005160 ORTHO05D006127 1.2e-16 90.1 56 78.6
Lj5A181T55 Lonicera japonica HOM05D005160 ORTHO05D006127 1.5e-16 89.7 79 58.2
Sabra04G0115600 Salix brachista HOM05D005160 ORTHO05D006127 4.5e-16 88.2 65 66.2
CiPaw.06G123200 Carya illinoinensis HOM05D005160 ORTHO05D006127 2.9e-15 85.5 57 70.2
ECA246G0167 Erigeron canadensis HOM05D005160 ORTHO05D006127 9.3e-14 80.5 58 69.0
Actinidia00615 Actinidia chinensis HOM05D005160 ORTHO05D006127 8.1e-10 67.4 45 73.3
Pp3c15_6240 Physcomitrium patens HOM05D005160 ORTHO05D006127 9.0e-09 63.9 64 45.3
SMO012G0038 Selaginella moellendorffii HOM05D005160 ORTHO05D006127 7.6e-08 60.8 70 38.6
Mapoly0029s0105 Marchantia polymorpha HOM05D005160 ORTHO05D006127 2.4e-06 55.8 71 40.8
AL7G44960 Arabidopsis lyrata HOM05D005160 ORTHO05D006127 7.1e-06 54.3 54 50.0


User provided reference genes

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