Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 0.0e+00 1082.4 528 100.0
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 3.2e-274 948.0 528 85.0
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 4.7e-262 907.5 526 80.8
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 3.6e-254 881.3 528 78.0
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 1.4e-253 879.4 528 77.8
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 1.7e-251 872.5 521 77.5
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 1.1e-250 869.8 521 77.4
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 2.7e-249 865.1 520 77.5
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 1.5e-239 832.8 512 76.2
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 1.9e-239 832.4 512 76.2
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 9.6e-239 830.1 567 69.7
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 1.3e-238 829.7 514 75.7
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 1.6e-238 829.3 517 73.5
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 4.8e-238 827.8 517 73.7
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 1.4e-237 826.2 517 73.9
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 5.3e-237 824.3 519 72.8
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 6.9e-237 823.9 514 74.1
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 9.0e-237 823.5 521 73.1
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 9.0e-237 823.5 524 73.5
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 4.5e-236 821.2 521 71.8
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 2.9e-235 818.5 521 71.4
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 4.9e-235 817.8 523 72.8
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 6.4e-235 817.4 517 73.1
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 1.1e-234 816.6 530 72.6
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 1.4e-234 816.2 521 71.4
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 2.4e-234 815.5 521 73.3
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 1.2e-233 813.1 521 71.4
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 1.2e-233 813.1 526 76.2
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 1.6e-233 812.8 521 73.3
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 2.1e-233 812.4 523 74.2
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 2.7e-233 812.0 514 74.5
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 7.9e-233 810.4 521 72.2
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 3.0e-232 808.5 515 73.2
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 1.1e-231 806.6 523 71.5
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 1.9e-231 805.8 514 73.5
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 2.5e-231 805.4 516 71.1
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.3e-231 804.7 517 73.1
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 5.6e-231 804.3 514 71.8
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 9.6e-231 803.5 521 70.4
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 2.1e-230 802.4 521 71.2
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 2.8e-230 802.0 496 75.4
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 6.2e-230 800.8 513 72.1
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 3.1e-229 798.5 520 71.5
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 7.6e-228 793.9 522 71.1
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 9.9e-228 793.5 537 69.6
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.9e-227 792.0 539 70.1
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 2.9e-227 792.0 513 71.7
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 8.4e-227 790.4 575 66.3
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 3.2e-226 788.5 517 70.2
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 2.1e-225 785.8 521 70.4
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 4.6e-225 784.6 513 70.8
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 1.3e-224 783.1 517 69.6
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 1.3e-224 783.1 482 75.9
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 3.0e-224 781.9 521 69.3
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 3.9e-224 781.6 518 68.1
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 5.1e-224 781.2 516 70.2
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 8.7e-224 780.4 516 68.4
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 8.7e-224 780.4 487 73.3
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 1.1e-223 780.0 511 70.5
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.5e-223 779.6 519 72.8
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 5.6e-223 777.7 518 67.8
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 5.3e-221 771.2 518 67.4
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 6.9e-221 770.8 520 67.3
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 2.6e-220 768.8 517 69.2
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 5.8e-220 767.7 527 68.9
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 8.4e-219 763.8 528 68.9
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 1.4e-218 763.1 526 66.9
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 5.5e-218 761.1 519 67.6
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 5.5e-218 761.1 519 67.6
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 7.1e-218 760.8 526 66.5
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 1.6e-217 759.6 519 67.2
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 4.6e-217 758.1 519 66.9
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 2.2e-214 749.2 523 66.9
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 2.2e-214 749.2 468 73.7
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 6.3e-214 747.7 544 64.2
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 8.2e-214 747.3 550 63.6
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 1.6e-209 733.0 516 69.8
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 3.0e-208 728.8 556 66.0
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 5.1e-208 728.0 515 64.9
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 7.4e-207 724.2 509 68.6
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 1.4e-205 719.9 517 64.6
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 1.2e-204 716.8 518 63.1
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 7.7e-204 714.1 523 64.8
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 4.2e-202 708.4 438 75.3
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 5.1e-200 701.4 503 68.6
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 1.1e-197 693.7 522 59.8
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 1.2e-196 690.3 590 60.3
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.0e-195 687.2 519 65.5
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 1.7e-195 686.4 575 59.3
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 7.2e-194 681.0 498 67.7
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 1.5e-191 673.3 399 77.7
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 3.3e-191 672.2 433 69.7
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 9.1e-189 664.1 520 63.7
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.8e-184 649.8 579 58.2
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 1.6e-180 636.7 392 74.7
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 8.0e-177 624.4 420 67.9
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 1.4e-173 613.6 336 85.4
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 7.0e-173 611.3 493 61.7
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 7.8e-164 581.3 532 52.6
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 2.3e-163 579.7 537 51.6
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 3.6e-161 572.4 365 73.4
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 4.7e-161 572.0 352 77.8
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 3.4e-151 539.3 504 53.2
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 3.0e-147 526.2 307 79.8
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 2.1e-145 520.0 518 52.7
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.1e-145 520.0 517 53.8
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 5.8e-143 511.9 358 68.7
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 3.3e-138 496.1 283 80.2
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 6.8e-136 488.4 550 44.5
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 2.3e-131 473.4 450 50.9
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 9.0e-128 461.5 341 64.8
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 8.7e-123 444.9 254 79.9
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 1.5e-114 417.5 228 83.8
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 1.9e-114 417.2 286 69.9
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 3.1e-112 409.8 234 79.9
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 3.1e-112 409.8 234 79.9
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 4.9e-110 402.5 226 80.1
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 3.4e-87 326.6 527 39.8
GSVIVG01007210001 Vitis vinifera HOM05D004979 ORTHO05D006190 7.4e-82 308.9 210 67.6
GSVIVG01007430001 Vitis vinifera HOM05D004979 ORTHO05D006190 9.1e-80 302.0 207 67.6
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 1.2e-79 301.6 167 81.4
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 2.6e-74 283.9 566 33.4
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 4.1e-72 276.6 511 35.4
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 7.0e-72 275.8 580 33.8
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 2.0e-71 274.2 169 76.3
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 8.0e-68 262.3 240 56.2
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 8.0e-68 262.3 494 34.6
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 5.7e-66 256.1 354 46.6
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 4.4e-58 229.9 196 56.6
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 4.0e-51 206.8 262 43.9
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 9.5e-45 185.7 336 36.0
ClCG03G002030 Citrullus lanatus HOM05D004979 ORTHO05D006190 1.2e-44 185.3 164 59.1
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 8.0e-36 156.0 85 78.8
CDE04G1277 Ceratophyllum demersum HOM05D004979 ORTHO05D006190 3.5e-31 140.6 99 64.6
Actinidia27722 Actinidia chinensis HOM05D004979 ORTHO05D006190 5.1e-30 136.7 196 42.3
QL03p011256 Quercus lobata HOM05D004979 ORTHO05D006190 2.5e-29 134.4 82 79.3
GSVIVG01004371001 Vitis vinifera HOM05D004979 ORTHO05D006190 3.3e-29 134.0 101 68.3
MBI07_g39750_MAGBIO Magnolia biondii HOM05D004979 ORTHO05D006190 9.5e-29 132.5 109 59.6
Lsat_1_v5_gn_8_74741 Lactuca sativa HOM05D004979 ORTHO05D006190 2.8e-28 131.0 105 65.7
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 4.9e-25 120.2 119 48.7
FAN19G1386 Fragaria x ananassa HOM05D004979 ORTHO05D006190 2.3e-22 111.3 85 63.5
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 7.6e-18 96.3 316 28.8
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 1.6e-12 78.6 41 70.7
AagrBONN_evm.TU.Sc2ySwM_117.715 Anthoceros agrestis HOM05D004979 ORTHO05D006190 2.4e-11 74.7 98 43.9
SHI20227 Sapria himalayana HOM05D004979 ORTHO05D006190 1.3e-09 68.9 51 60.8
Medtr3g085120 Medicago truncatula HOM05D002545 ORTHO05D002335 5.4e-08 63.5 120 31.7
Sc05g0003730 Simmondsia chinensis HOM05D004979 ORTHO05D006190 7.9e-07 59.7 79 43.0
CBR_g72775 Chara braunii HOM05D004979 ORTHO05D132771 2.3e-06 58.2 245 24.9


User provided reference genes

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