Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00880 Erythranthe guttata HOM05D003268 ORTHO05D003719 1.0e-112 410.2 230 100.0
MSTRG.16427 Avicennia marina HOM05D003268 ORTHO05D003719 1.6e-41 173.7 208 51.9
SGA_v2.0_scaffold22G09705 Striga asiatica HOM05D003268 ORTHO05D003719 2.3e-40 169.9 199 50.8
Oeu023379.1 Olea europaea HOM05D003268 ORTHO05D003719 8.9e-40 167.9 187 55.1
SalBow4G1159 Salvia bowleyana HOM05D003268 ORTHO05D003719 1.2e-39 167.5 206 51.0
Oeu023377.1 Olea europaea HOM05D003268 ORTHO05D003719 1.5e-39 167.2 186 54.3
Cc02_g35810 Coffea canephora HOM05D003268 ORTHO05D003719 3.4e-39 166.0 197 51.8
Migut.N00971 Erythranthe guttata HOM05D003268 ORTHO05D003719 7.8e-36 154.8 208 47.1
Oeu016542.1 Olea europaea HOM05D003268 ORTHO05D003719 1.0e-35 154.5 208 47.6
unitig_8.g4507 Utricularia gibba HOM05D003268 ORTHO05D003719 8.6e-35 151.4 188 48.4
Nitab4.5_0002485g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 1.5e-34 150.6 179 48.0
CAN.G1248.20 Capsicum annuum HOM05D003268 ORTHO05D003719 2.5e-34 149.8 177 46.9
Dinv30944 Davidia involucrata HOM05D003268 ORTHO05D003719 7.3e-34 148.3 177 49.7
Nitab4.5_0005904g0060 Nicotiana tabacum HOM05D003268 ORTHO05D003719 4.7e-33 145.6 179 47.5
PGSC0003DMG400044126 Solanum tuberosum HOM05D003268 ORTHO05D003719 4.7e-33 145.6 200 46.0
Migut.O00762 Erythranthe guttata HOM05D003268 ORTHO05D003719 6.2e-33 145.2 182 46.7
Solyc01g101160.2 Solanum lycopersicum HOM05D003268 ORTHO05D003719 8.1e-33 144.8 200 44.5
Sopen01g044640 Solanum pennellii HOM05D003268 ORTHO05D003719 8.1e-33 144.8 200 44.5
CSS0047817 Camellia sinensis var. sinensis HOM05D003268 ORTHO05D003719 2.2e-30 136.7 181 48.1
Hma1.2p1_0759F.1_g213940 Hydrangea macrophylla HOM05D003268 ORTHO05D003719 1.2e-28 131.0 183 47.0
Lj5P319T26 Lonicera japonica HOM05D003268 ORTHO05D003719 2.7e-28 129.8 187 47.6
Actinidia11688 Actinidia chinensis HOM05D003268 ORTHO05D003719 3.9e-27 125.9 177 44.6
QL06p014213 Quercus lobata HOM05D003268 ORTHO05D003719 1.3e-25 120.9 192 40.6
HanXRQChr09g0250221 Helianthus annuus HOM05D003268 ORTHO05D003719 4.8e-25 119.0 195 40.5
Sc16g0009390 Simmondsia chinensis HOM05D003268 ORTHO05D003719 1.1e-24 117.9 185 42.2
Manes.08G107700 Manihot esculenta HOM05D003268 ORTHO05D003719 1.4e-24 117.5 179 39.7
Cpa.g.sc53.77 Carica papaya HOM05D003268 ORTHO05D003719 2.4e-24 116.7 182 41.8
COL.COLO4_34517 Corchorus olitorius HOM05D003268 ORTHO05D003719 3.1e-24 116.3 183 42.1
Manes.11G020800 Manihot esculenta HOM05D003268 ORTHO05D003719 4.0e-24 115.9 180 41.7
ClCG03G017870 Citrullus lanatus HOM05D003268 ORTHO05D003719 1.5e-23 114.0 210 37.6
Dinv29508 Davidia involucrata HOM05D003268 ORTHO05D003719 3.4e-23 112.8 181 42.0
Thecc.04G313000 Theobroma cacao HOM05D003268 ORTHO05D003719 4.4e-23 112.5 189 39.2
Ciclev10005819m.g Citrus clementina HOM05D003268 ORTHO05D003719 7.6e-23 111.7 197 40.1
Migut.B00879 Erythranthe guttata HOM05D003268 ORTHO05D003719 1.3e-22 110.9 190 42.6
CANSAT54G2527 Cannabis sativa HOM05D003268 ORTHO05D003719 1.7e-22 110.5 215 36.7
Lj6P701T18 Lonicera japonica HOM05D003268 ORTHO05D003719 2.2e-22 110.2 186 40.3
Atru.chr4.3150 Acer truncatum HOM05D003268 ORTHO05D003719 4.9e-22 109.0 181 40.3
Duzib212G0032 Durio zibethinus HOM05D003268 ORTHO05D003719 8.4e-22 108.2 187 38.5
MBI19_g47476_MAGBIO Magnolia biondii HOM05D003268 ORTHO05D003719 1.1e-21 107.8 182 40.1
MELO3C015242.2 Cucumis melo HOM05D003268 ORTHO05D003719 1.9e-21 107.1 181 40.3
TAR636G0250 Trochodendron aralioides HOM05D003268 ORTHO05D003719 1.9e-21 107.1 179 40.2
ECA240G0886 Erigeron canadensis HOM05D003268 ORTHO05D003719 2.4e-21 106.7 184 39.1
Rhsim11G0103200 Rhododendron simsii HOM05D003268 ORTHO05D003719 2.4e-21 106.7 185 38.9
Ah.10g026900 Amaranthus hybridus HOM05D003268 ORTHO05D003719 3.2e-21 106.3 193 38.9
Cpa.g.sc48.222 Carica papaya HOM05D003268 ORTHO05D003719 3.2e-21 106.3 199 37.2
Potri.010G002200 Populus trichocarpa HOM05D003268 ORTHO05D003719 3.2e-21 106.3 179 40.8
TAR362G1252 Trochodendron aralioides HOM05D003268 ORTHO05D003719 7.1e-21 105.1 181 38.1
Sabra10G0001700 Salix brachista HOM05D003268 ORTHO05D003719 9.3e-21 104.8 179 40.2
TWI56G0501 Tripterygium wilfordii HOM05D003268 ORTHO05D003719 9.3e-21 104.8 196 37.2
Gohir.A02G058400 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.6e-20 104.0 189 39.2
Haze_00767 Corylus avellana HOM05D003268 ORTHO05D003719 2.1e-20 103.6 181 38.7
HanXRQChr09g0248281 Helianthus annuus HOM05D003268 ORTHO05D003719 2.1e-20 103.6 189 39.2
CsaV3_1G038030 Cucumis sativus L. HOM05D003268 ORTHO05D003719 2.7e-20 103.2 182 39.6
TAR633G0292 Trochodendron aralioides HOM05D003268 ORTHO05D003719 3.5e-20 102.8 181 37.0
PGR031G0843 Punica granatum HOM05D003268 ORTHO05D003719 4.6e-20 102.4 216 37.0
Gohir.D02G064200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 6.0e-20 102.1 189 38.6
Gorai.005G072500 Gossypium raimondii HOM05D003268 ORTHO05D003719 6.0e-20 102.1 189 38.6
Aa31LG1G5560 Aethionema arabicum HOM05D003268 ORTHO05D003719 2.3e-19 100.1 194 35.6
Haze_03993 Corylus avellana HOM05D003268 ORTHO05D003719 5.1e-19 99.0 195 37.9
Glyma.10G143800 Glycine max HOM05D003268 ORTHO05D003719 5.1e-19 99.0 174 37.4
PSO170G4270 Papaver somniferum HOM05D003268 ORTHO05D003719 1.1e-18 97.8 188 38.8
Psat6g155480 Pisum sativum HOM05D003268 ORTHO05D003719 1.5e-18 97.4 171 36.8
unitig_578.g15945 Utricularia gibba HOM05D003268 ORTHO05D003719 1.5e-18 97.4 89 57.3
vmacro01600 Vaccinium macrocarpon HOM05D003268 ORTHO05D003719 1.9e-18 97.1 179 37.4
Ciclev10013870m.g Citrus clementina HOM05D003268 ORTHO05D003719 3.3e-18 96.3 164 39.6
Migut.B00893 Erythranthe guttata HOM05D003268 ORTHO05D003719 3.3e-18 96.3 193 33.7
Oeu020279.1 Olea europaea HOM05D003268 ORTHO05D003719 3.3e-18 96.3 182 37.4
Sed0007403 Sechium edule HOM05D003268 ORTHO05D003719 3.3e-18 96.3 207 34.3
CiPaw.07G035600 Carya illinoinensis HOM05D003268 ORTHO05D003719 5.6e-18 95.5 191 36.6
SHI00050 Sapria himalayana HOM05D002272 ORTHO05D005405 5.6e-18 95.5 197 35.5
Glyma.20G092502 Glycine max HOM05D003268 ORTHO05D003719 9.6e-18 94.7 191 35.1
Gohir.A13G177600 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.3e-17 94.4 195 35.4
Gohir.D13G184200 Gossypium hirsutum HOM05D003268 ORTHO05D003719 1.3e-17 94.4 195 34.9
Gorai.013G209800 Gossypium raimondii HOM05D003268 ORTHO05D003719 1.3e-17 94.4 195 34.9
QL03p010269 Quercus lobata HOM05D003268 ORTHO05D003719 1.3e-17 94.4 209 36.4
QL03p010503 Quercus lobata HOM05D003268 ORTHO05D003719 1.3e-17 94.4 209 36.4
MSTRG.20352 Avicennia marina HOM05D003268 ORTHO05D003719 1.6e-17 94.0 188 34.0
PSO761G0464 Papaver somniferum HOM05D003268 ORTHO05D003719 1.6e-17 94.0 183 35.0
COL.COLO4_05489 Corchorus olitorius HOM05D003268 ORTHO05D003719 2.1e-17 93.6 202 33.2
FvH4_6g08440 Fragaria vesca HOM05D003268 ORTHO05D003719 2.1e-17 93.6 188 37.2
FAN14G0797 Fragaria x ananassa HOM05D003268 ORTHO05D003719 2.1e-17 93.6 188 37.2
Medtr1g484850 Medicago truncatula HOM05D003268 ORTHO05D003719 4.8e-17 92.4 173 35.8
Duzib128G0788 Durio zibethinus HOM05D003268 ORTHO05D003719 6.2e-17 92.0 178 36.5
THA.LOC104816841 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 2.4e-16 90.1 193 34.7
Thecc.05G329300 Theobroma cacao HOM05D003268 ORTHO05D003719 2.4e-16 90.1 178 36.0
C05p07520 Brassica napus HOM05D003268 ORTHO05D003719 3.1e-16 89.7 202 33.2
BolC5t29506H Brassica oleracea HOM05D003268 ORTHO05D003719 3.1e-16 89.7 202 33.2
FAN02G3445 Fragaria x ananassa HOM05D003268 ORTHO05D003719 3.1e-16 89.7 188 36.7
PSO210G7784 Papaver somniferum HOM05D003268 ORTHO05D003719 3.1e-16 89.7 183 34.4
Atru.chr12.1545 Acer truncatum HOM05D003268 ORTHO05D003719 4.0e-16 89.4 175 36.6
A06p06210 Brassica napus HOM05D003268 ORTHO05D003719 4.0e-16 89.4 202 32.7
BraA06t23832Z Brassica rapa HOM05D003268 ORTHO05D003719 4.0e-16 89.4 202 32.7
Ca_10197_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 4.0e-16 89.4 175 35.4
Thhalv10008580m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 4.0e-16 89.4 161 37.3
Sabra08G0150300 Salix brachista HOM05D003268 ORTHO05D003719 4.0e-16 89.4 144 41.0
Aa31LG8G4410 Aethionema arabicum HOM05D002272 ORTHO05D005405 5.3e-16 89.0 194 34.0
Lj5g0018140 Lotus japonicus HOM05D003268 ORTHO05D003719 6.9e-16 88.6 187 34.8
SalBow5G1243 Salvia bowleyana HOM05D003268 ORTHO05D003719 6.9e-16 88.6 169 36.7
Oeu034985.1 Olea europaea HOM05D003268 ORTHO05D003719 1.2e-15 87.8 188 34.0
BcaC05g28789 Brassica carinata HOM05D003268 ORTHO05D003719 1.5e-15 87.4 181 36.5
MD16G1136300 Malus domestica HOM05D003268 ORTHO05D003719 2.0e-15 87.0 179 35.2
Solyc03g114270.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 2.0e-15 87.0 178 33.7
Sopen03g033360 Solanum pennellii HOM05D003268 ORTHO05D003796 2.0e-15 87.0 178 33.7
Carub.0001s0886 Capsella rubella HOM05D003268 ORTHO05D003719 2.6e-15 86.7 182 34.6
HanXRQChr10g0294291 Helianthus annuus HOM05D003268 ORTHO05D003719 2.6e-15 86.7 181 34.8
Potri.008G206600 Populus trichocarpa HOM05D003268 ORTHO05D003719 3.4e-15 86.3 144 40.3
Sed0001415 Sechium edule HOM05D003268 ORTHO05D003719 3.4e-15 86.3 179 34.6
THA.LOC104820490 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 3.4e-15 86.3 196 33.2
CARHR009490 Cardamine hirsuta HOM05D003268 ORTHO05D003719 7.6e-15 85.1 200 31.5
PGSC0003DMG400024495 Solanum tuberosum HOM05D003268 ORTHO05D003719 9.9e-15 84.7 179 34.1
AT1G09520 Arabidopsis thaliana HOM05D003268 ORTHO05D003719 1.3e-14 84.3 193 31.6
Sp1g08120 Schrenkiella parvula HOM05D003268 ORTHO05D003719 1.3e-14 84.3 194 31.4
TPR.G2590 Trifolium pratense HOM05D003268 ORTHO05D003719 1.3e-14 84.3 177 33.9
Thhalv10022081m.g Eutrema salsugineum HOM05D003268 ORTHO05D003719 1.7e-14 84.0 190 31.6
FAN09G1400 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.7e-14 84.0 177 35.6
Aqoxy2G02513 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 2.2e-14 83.6 179 31.8
MD13G1139400 Malus domestica HOM05D003268 ORTHO05D003719 2.2e-14 83.6 179 35.8
Sed0010166 Sechium edule HOM05D003268 ORTHO05D003719 2.2e-14 83.6 179 33.5
MELO3C006751.2 Cucumis melo HOM05D003268 ORTHO05D003719 2.9e-14 83.2 184 34.2
HPP92_002632 Vanilla planifolia HOM05D004842 ORTHO05D005929 2.9e-14 83.2 161 36.6
C05p48980 Brassica napus HOM05D003268 ORTHO05D003719 3.8e-14 82.8 181 36.5
BolC5t33638H Brassica oleracea HOM05D003268 ORTHO05D003719 3.8e-14 82.8 181 36.5
RcHm_v2.0_Chr3g0458411 Rosa chinensis HOM05D003268 ORTHO05D003719 3.8e-14 82.8 196 35.2
AL1G20040 Arabidopsis lyrata HOM05D003268 ORTHO05D003719 4.9e-14 82.4 201 32.8
BcaB06g25842 Brassica carinata HOM05D003268 ORTHO05D003719 6.4e-14 82.0 183 35.5
CiPaw.01G129300 Carya illinoinensis HOM05D003268 ORTHO05D003719 6.4e-14 82.0 178 33.7
Phvul.007G204700 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 6.4e-14 82.0 192 31.8
Solyc10g011990.1 Solanum lycopersicum HOM05D003268 ORTHO05D003719 6.4e-14 82.0 181 35.4
ECA234G2755 Erigeron canadensis HOM05D003268 ORTHO05D003719 8.4e-14 81.6 202 31.2
Glyma.17G041900 Glycine max HOM05D003268 ORTHO05D003719 8.4e-14 81.6 189 33.9
Lalb_Chr13g0299031 Lupinus albus HOM05D003268 ORTHO05D003719 8.4e-14 81.6 190 32.6
Sopen10g005750 Solanum pennellii HOM05D003268 ORTHO05D003719 8.4e-14 81.6 181 34.8
DCAR_001893 Daucus carota HOM05D003268 ORTHO05D003719 1.1e-13 81.3 215 28.8
C08p49440 Brassica napus HOM05D003268 ORTHO05D003719 2.4e-13 80.1 178 32.0
Glyma.13G118100 Glycine max HOM05D003268 ORTHO05D003719 2.4e-13 80.1 195 32.3
Lalb_Chr02g0147571 Lupinus albus HOM05D003268 ORTHO05D003719 3.2e-13 79.7 193 33.7
Lalb_Chr06g0167311 Lupinus albus HOM05D003268 ORTHO05D003719 3.2e-13 79.7 198 33.8
BraA08t35363Z Brassica rapa HOM05D003268 ORTHO05D003719 4.2e-13 79.3 199 29.6
PGSC0003DMG401019388 Solanum tuberosum HOM05D003268 ORTHO05D003719 5.4e-13 79.0 170 35.3
THA.LOC104821812 Tarenaya hassleriana HOM05D003268 ORTHO05D003719 1.2e-12 77.8 166 31.9
Ca_21366_v3 Cicer arietinum L. HOM05D003268 ORTHO05D003719 1.6e-12 77.4 187 34.2
Cfa015729 Carpinus fangiana HOM05D003268 ORTHO05D003719 2.1e-12 77.0 180 31.7
BraA08t35364Z Brassica rapa HOM05D003268 ORTHO05D003719 2.7e-12 76.6 196 32.1
Lalb_Chr07g0181591 Lupinus albus HOM05D003268 ORTHO05D003719 3.5e-12 76.3 192 31.2
PGSC0003DMG400044873 Solanum tuberosum HOM05D003268 ORTHO05D003719 3.5e-12 76.3 176 34.1
Sp3g15630 Schrenkiella parvula HOM05D003268 ORTHO05D003719 4.6e-12 75.9 190 28.9
VMungo0720G1780 Vigna mungo HOM05D003268 ORTHO05D003719 4.6e-12 75.9 191 29.3
Nitab4.5_0000039g0190 Nicotiana tabacum HOM05D003268 ORTHO05D003719 6.0e-12 75.5 185 34.6
HPP92_012769 Vanilla planifolia HOM05D003268 ORTHO05D003719 6.0e-12 75.5 193 32.1
BolC8t48925H Brassica oleracea HOM05D003268 ORTHO05D003719 1.0e-11 74.7 203 30.0
BcaC09g48702 Brassica carinata HOM05D003268 ORTHO05D003719 1.3e-11 74.3 181 31.5
A09p65470 Brassica napus HOM05D003268 ORTHO05D003719 1.3e-11 74.3 206 30.6
C01p46780 Brassica napus HOM05D003268 ORTHO05D003719 1.3e-11 74.3 181 31.5
BolC1t04651H Brassica oleracea HOM05D003268 ORTHO05D003719 1.3e-11 74.3 181 31.5
BraA09t41892Z Brassica rapa HOM05D003268 ORTHO05D003719 1.3e-11 74.3 206 30.6
ATR0796G330 Amborella trichopoda HOM05D003268 ORTHO05D003719 1.8e-11 73.9 185 30.8
Nitab4.5_0001808g0030 Nicotiana tabacum HOM05D003268 ORTHO05D003719 2.3e-11 73.6 172 34.3
BcaB04g20839 Brassica carinata HOM05D003268 ORTHO05D003719 3.0e-11 73.2 181 33.1
A08p34530 Brassica napus HOM05D003268 ORTHO05D003719 3.0e-11 73.2 196 30.6
C08p12950 Brassica napus HOM05D003268 ORTHO05D003719 3.9e-11 72.8 198 30.3
Psat0s1206g0240 Pisum sativum HOM05D003268 ORTHO05D003719 5.1e-11 72.4 183 34.4
BcaC07g38514 Brassica carinata HOM05D003268 ORTHO05D003719 1.1e-10 71.2 169 32.5
TPR.G12613 Trifolium pratense HOM05D003268 ORTHO05D003719 1.1e-10 71.2 185 33.5
Actinidia17741 Actinidia chinensis HOM05D003268 ORTHO05D003719 1.5e-10 70.9 140 40.0
BcaC09g48706 Brassica carinata HOM05D003268 ORTHO05D003719 1.5e-10 70.9 180 30.0
BolC1t04640H Brassica oleracea HOM05D003268 ORTHO05D003719 1.5e-10 70.9 180 30.0
Carub.0003s1718 Capsella rubella HOM05D003268 ORTHO05D003719 4.3e-10 69.3 191 28.3
VMungo1215G0793 Vigna mungo HOM05D003268 ORTHO05D003719 7.4e-10 68.6 184 32.6
Phvul.003G123200 Phaseolus vulgaris HOM05D003268 ORTHO05D003719 9.6e-10 68.2 179 32.4
SEGI_18442 Sequoiadendron giganteum HOM05D003268 ORTHO05D003719 9.6e-10 68.2 185 29.2
C08p00580 Brassica napus HOM05D003268 ORTHO05D003719 2.8e-09 66.6 155 32.9
AL3G30540 Arabidopsis lyrata HOM05D003268 ORTHO05D003719 3.7e-09 66.2 194 26.8
Dinv24510 Davidia involucrata HOM05D003268 ORTHO05D003719 3.7e-09 66.2 133 41.4
RcHm_v2.0_Chr4g0427521 Rosa chinensis HOM05D003268 ORTHO05D003719 3.7e-09 66.2 177 31.1
CARHR092780 Cardamine hirsuta HOM05D003268 ORTHO05D003719 4.8e-09 65.9 196 27.6
Medtr4g124100 Medicago truncatula HOM05D003268 ORTHO05D003719 6.2e-09 65.5 164 32.3
Aqoxy5G02799 Aquilegia oxysepala HOM05D003268 ORTHO05D003719 2.4e-08 63.5 188 30.3
C01p46720 Brassica napus HOM05D003268 ORTHO05D003719 4.0e-08 62.8 162 29.6
A01p36890 Brassica napus HOM05D003268 ORTHO05D003719 5.3e-08 62.4 183 30.6
FAN05G0723 Fragaria x ananassa HOM05D003268 ORTHO05D003719 1.5e-07 60.8 83 39.8
BolC8t52481H Brassica oleracea HOM05D003268 ORTHO05D003719 2.0e-07 60.5 162 27.8
CsaV3_3G015530 Cucumis sativus L. HOM05D003268 ORTHO05D003719 4.5e-07 59.3 186 29.0
BraA01t03748Z Brassica rapa HOM05D003268 ORTHO05D003719 5.8e-07 58.9 183 29.5
BcaC07g38513 Brassica carinata HOM05D003268 ORTHO05D003719 7.6e-07 58.5 194 28.9
unitig_578.g15944 Utricularia gibba HOM05D003268 ORTHO05D003719 7.6e-07 58.5 61 57.4
Lj4g0025064 Lotus japonicus HOM05D003268 ORTHO05D003719 2.9e-06 56.6 187 28.3


User provided reference genes

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