Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00849 Erythranthe guttata HOM05D004385 ORTHO05D005245 7.5e-275 949.9 476 100.0
Migut.L01912 Erythranthe guttata HOM05D004385 ORTHO05D005245 3.4e-219 765.0 382 100.0
MSTRG.10464 Avicennia marina HOM05D004385 ORTHO05D005245 4.2e-201 704.9 476 74.2
Dinv26468 Davidia involucrata HOM05D004385 ORTHO05D005245 3.4e-195 685.3 475 71.6
Oeu028831.1 Olea europaea HOM05D004385 ORTHO05D005245 8.5e-194 680.6 476 71.4
Potri.018G138206 Populus trichocarpa HOM05D004385 ORTHO05D005245 4.8e-189 664.8 475 69.5
vmacro22292 Vaccinium macrocarpon HOM05D004385 ORTHO05D005245 1.1e-188 663.7 480 68.3
Glyma.12G049000 Glycine max HOM05D004385 ORTHO05D005245 1.4e-188 663.3 476 69.5
Lj3g0012868 Lotus japonicus HOM05D004385 ORTHO05D005245 5.3e-188 661.4 475 69.1
Ca_20811_v3 Cicer arietinum L. HOM05D004385 ORTHO05D005245 5.9e-187 657.9 475 68.8
FvH4_4g06230 Fragaria vesca HOM05D004385 ORTHO05D005245 5.9e-187 657.9 478 66.7
Medtr4g068230 Medicago truncatula HOM05D004385 ORTHO05D005245 5.9e-187 657.9 473 68.1
Prupe.1G065500 Prunus persica HOM05D004385 ORTHO05D005245 7.7e-187 657.5 475 68.4
RcHm_v2.0_Chr4g0397951 Rosa chinensis HOM05D004385 ORTHO05D005245 7.7e-187 657.5 478 67.4
Rhsim05G0069600 Rhododendron simsii HOM05D004385 ORTHO05D005245 1.0e-186 657.1 480 68.1
MD16G1239400 Malus domestica HOM05D004385 ORTHO05D005245 1.3e-186 656.8 479 67.2
CSS0002376 Camellia sinensis var. sinensis HOM05D004385 ORTHO05D005245 3.8e-186 655.2 480 69.0
Phvul.011G051400 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 5.0e-186 654.8 473 69.1
Sopen07g005830 Solanum pennellii HOM05D004385 ORTHO05D005245 1.1e-185 653.7 475 68.8
VMungo1127G2221 Vigna mungo HOM05D004385 ORTHO05D005245 7.2e-185 651.0 473 68.9
QL11p009243 Quercus lobata HOM05D004385 ORTHO05D005245 9.4e-185 650.6 476 67.4
Haze_19053 Corylus avellana HOM05D004385 ORTHO05D005245 2.7e-184 649.0 474 68.1
Hma1.2p1_0284F.1_g113840 Hydrangea macrophylla HOM05D004385 ORTHO05D005245 3.6e-184 648.7 475 68.6
CANSAT80G1931 Cannabis sativa HOM05D004385 ORTHO05D005245 4.7e-184 648.3 478 66.7
SGA_v2.0_scaffold21G09624 Striga asiatica HOM05D004385 ORTHO05D005245 4.7e-184 648.3 474 71.3
TAR626G1834 Trochodendron aralioides HOM05D004385 ORTHO05D005245 6.1e-184 647.9 475 67.2
Cc00_g00420 Coffea canephora HOM05D004385 ORTHO05D005245 1.8e-183 646.4 475 67.4
Manes.03G078300 Manihot esculenta HOM05D004385 ORTHO05D005245 1.8e-183 646.4 479 67.4
TPR.G34256 Trifolium pratense HOM05D004385 ORTHO05D005245 1.8e-183 646.4 475 67.6
Cpa.g.sc123.33 Carica papaya HOM05D004385 ORTHO05D005245 3.9e-183 645.2 475 67.4
arahy.Tifrunner.gnm1.ann1.D17V0C Arachis hypogaea HOM05D004385 ORTHO05D005245 8.8e-183 644.0 474 67.3
DCAR_023663 Daucus carota HOM05D004385 ORTHO05D005245 8.8e-183 644.0 478 67.2
Gohir.D05G001400 Gossypium hirsutum HOM05D004385 ORTHO05D005245 8.8e-183 644.0 476 66.8
TWI32G0217 Tripterygium wilfordii HOM05D004385 ORTHO05D005245 8.8e-183 644.0 476 67.0
Gorai.009G001300 Gossypium raimondii HOM05D004385 ORTHO05D005245 1.5e-182 643.3 476 66.6
Thecc.09G194100 Theobroma cacao HOM05D004385 ORTHO05D005245 2.0e-182 642.9 475 67.6
arahy.Tifrunner.gnm1.ann1.77JVZB Arachis hypogaea HOM05D004385 ORTHO05D005245 3.3e-182 642.1 474 66.7
FAN12G0289 Fragaria x ananassa HOM05D004385 ORTHO05D005245 3.3e-182 642.1 506 62.8
Lalb_Chr19g0138471 Lupinus albus HOM05D004385 ORTHO05D005245 1.3e-181 640.2 474 67.1
Psat0s5298g0040 Pisum sativum HOM05D004385 ORTHO05D005245 2.2e-181 639.4 474 66.7
Cc00_g00450 Coffea canephora HOM05D004385 ORTHO05D005245 3.7e-181 638.6 475 67.2
HanXRQChr03g0067331 Helianthus annuus HOM05D004385 ORTHO05D005245 4.8e-181 638.3 477 65.6
Manes.03G078400 Manihot esculenta HOM05D004385 ORTHO05D005245 6.3e-181 637.9 474 67.9
Atru.chr7.972_Atru.chr7.973 Acer truncatum HOM05D004385 ORTHO05D005245 8.2e-181 637.5 474 67.5
Gohir.A05G001100 Gossypium hirsutum HOM05D004385 ORTHO05D005245 8.2e-181 637.5 476 66.2
Duzib168G1467 Durio zibethinus HOM05D004385 ORTHO05D005245 2.0e-179 632.9 470 66.4
Sed0013454 Sechium edule HOM05D004385 ORTHO05D005245 2.0e-179 632.9 475 65.7
COL.COLO4_24913 Corchorus olitorius HOM05D004385 ORTHO05D005245 2.6e-179 632.5 475 67.4
Medtr4g068240 Medicago truncatula HOM05D004385 ORTHO05D005245 3.5e-179 632.1 473 66.0
EL10Ac2g03630 Beta vulgaris HOM05D004385 ORTHO05D005245 5.9e-179 631.3 487 64.7
Medtr4g068270 Medicago truncatula HOM05D004385 ORTHO05D005245 5.9e-179 631.3 473 65.8
ECA240G2514 Erigeron canadensis HOM05D004385 ORTHO05D005245 1.1e-177 627.1 474 65.6
CsaV3_2G035400 Cucumis sativus L. HOM05D004385 ORTHO05D005245 7.2e-177 624.4 476 64.1
ClCG06G014050 Citrullus lanatus HOM05D004385 ORTHO05D005245 2.1e-176 622.9 474 64.3
Nn1g09800 Nelumbo nucifera HOM05D004385 ORTHO05D005245 2.7e-176 622.5 475 65.5
AUR62028001 Chenopodium quinoa HOM05D004385 ORTHO05D005245 6.1e-176 621.3 474 65.2
Lsat_1_v5_gn_7_57600 Lactuca sativa HOM05D004385 ORTHO05D005245 1.8e-175 619.8 472 64.8
Eucgr.C02022 Eucalyptus grandis HOM05D004385 ORTHO05D005245 2.3e-175 619.4 477 64.2
Haze_19054 Corylus avellana HOM05D004385 ORTHO05D005245 5.2e-175 618.2 496 63.7
Phvul.011G051300 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 6.7e-175 617.8 478 65.3
CANSAT80G0643 Cannabis sativa HOM05D004385 ORTHO05D005245 2.0e-174 616.3 473 63.8
VMungo1127G1209 Vigna mungo HOM05D004385 ORTHO05D005245 5.7e-174 614.8 475 64.4
Sed0010902 Sechium edule HOM05D004385 ORTHO05D005245 3.7e-173 612.1 475 62.9
MBI11_g07424_MAGBIO Magnolia biondii HOM05D004385 ORTHO05D005245 8.2e-173 610.9 479 63.9
Cpa.g.sc123.32 Carica papaya HOM05D004385 ORTHO05D005245 1.8e-172 609.8 494 62.3
PGR142G0778 Punica granatum HOM05D004385 ORTHO05D005245 2.0e-171 606.3 478 63.6
MELO3C019214.2 Cucumis melo HOM05D004385 ORTHO05D005245 2.7e-171 605.9 513 59.6
Nitab4.5_0000413g0040 Nicotiana tabacum HOM05D004385 ORTHO05D005245 1.7e-170 603.2 476 65.5
Sed0010048 Sechium edule HOM05D004385 ORTHO05D005245 2.9e-170 602.4 474 62.0
Phvul.011G051100 Phaseolus vulgaris HOM05D004385 ORTHO05D005245 5.0e-170 601.7 475 64.0
ClCG06G014070 Citrullus lanatus HOM05D004385 ORTHO05D005245 7.2e-169 597.8 474 63.5
CiPaw.15G156000 Carya illinoinensis HOM05D004385 ORTHO05D005245 1.6e-168 596.7 479 64.1
Nitab4.5_0001205g0010 Nicotiana tabacum HOM05D004385 ORTHO05D005245 4.7e-168 595.1 475 64.6
Peaxi162Scf00320g00412 Petunia axillaris HOM05D004385 ORTHO05D005245 4.0e-167 592.0 476 63.9
Psat0s8631g0040 Pisum sativum HOM05D004385 ORTHO05D005245 2.0e-166 589.7 475 62.7
Sed0018057 Sechium edule HOM05D004385 ORTHO05D005245 5.7e-166 588.2 473 61.5
Solyc07g015980.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.7e-165 586.6 475 64.2
TPR.G10229 Trifolium pratense HOM05D004385 ORTHO05D005245 7.0e-164 581.3 572 55.4
HanXRQChr03g0067221 Helianthus annuus HOM05D004385 ORTHO05D005245 1.7e-162 576.6 474 60.5
Sabra18G0119900 Salix brachista HOM05D004385 ORTHO05D005245 5.0e-162 575.1 494 60.9
Hund03234 Selenicereus undatus HOM05D004385 ORTHO05D005245 3.6e-160 568.9 475 61.5
HPP92_003174 Vanilla planifolia HOM05D004385 ORTHO05D005245 3.0e-159 565.8 475 61.1
Peaxi162Scf00320g00411 Petunia axillaris HOM05D004385 ORTHO05D005245 5.2e-159 565.1 480 58.1
ECA240G4307 Erigeron canadensis HOM05D004385 ORTHO05D005245 3.4e-158 562.4 479 58.2
Potri.018G145600 Populus trichocarpa HOM05D004385 ORTHO05D005245 4.4e-158 562.0 418 67.0
EL10Ac2g03633 Beta vulgaris HOM05D004385 ORTHO05D005245 1.1e-156 557.4 474 59.7
HanXRQChr03g0067391 Helianthus annuus HOM05D004385 ORTHO05D005245 4.1e-156 555.4 477 58.7
AUR62028006 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.9e-153 546.6 473 59.6
AUR62020716 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.3e-153 545.8 474 59.9
RhsimUnG0051500 Rhododendron simsii HOM05D004385 ORTHO05D005245 7.3e-153 544.7 487 58.9
EL10Ac2g03634 Beta vulgaris HOM05D004385 ORTHO05D005245 2.1e-152 543.1 459 60.8
AUR62028000 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.1e-152 543.1 482 58.1
ATR1147G022 Amborella trichopoda HOM05D004385 ORTHO05D005245 6.4e-149 531.6 479 56.6
Peaxi162Scf00320g00316 Petunia axillaris HOM05D004385 ORTHO05D005245 7.0e-148 528.1 479 55.3
SEGI_12293 Sequoiadendron giganteum HOM05D004385 ORTHO05D005245 7.0e-148 528.1 486 56.4
EL10Ac2g03631 Beta vulgaris HOM05D004385 ORTHO05D005245 4.6e-147 525.4 481 56.3
CDE06G1948 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 1.3e-141 507.3 443 58.0
Rhsim01G0218300 Rhododendron simsii HOM05D004385 ORTHO05D005245 3.7e-141 505.8 346 71.4
Peaxi162Scf00320g00317 Petunia axillaris HOM05D004385 ORTHO05D005245 1.6e-139 500.4 482 54.1
EL10Ac2g03632 Beta vulgaris HOM05D004385 ORTHO05D005245 3.5e-139 499.2 474 56.1
AUR62027997 Chenopodium quinoa HOM05D004385 ORTHO05D005245 5.0e-138 495.4 485 54.2
Ah.11g043620 Amaranthus hybridus HOM05D004385 ORTHO05D005245 1.9e-137 493.4 474 56.1
SGA_v2.0_scaffold21G09621 Striga asiatica HOM05D004385 ORTHO05D005245 1.6e-136 490.3 406 58.9
EL10Ac2g04866 Beta vulgaris HOM05D004385 ORTHO05D005245 1.5e-134 483.8 478 54.4
Atru.chr9.1512 Acer truncatum HOM05D004385 ORTHO05D005245 4.4e-134 482.3 481 54.9
Pp3c15_21680 Physcomitrium patens HOM05D004385 ORTHO05D005245 2.2e-133 479.9 487 50.5
Mapoly0055s0075 Marchantia polymorpha HOM05D004385 ORTHO05D005245 6.4e-133 478.4 492 50.0
Rhsim03G0268600 Rhododendron simsii HOM05D004385 ORTHO05D005245 8.3e-133 478.0 479 53.9
Cpa.g.sc123.30 Carica papaya HOM05D004385 ORTHO05D005245 1.1e-132 477.6 475 53.7
AagrBONN_evm.TU.Sc2ySwM_117.1864 Anthoceros agrestis HOM05D004385 ORTHO05D005245 1.4e-132 477.2 496 49.8
Ah.11g043630 Amaranthus hybridus HOM05D004385 ORTHO05D005245 6.0e-131 471.9 479 53.9
Cpa.g.sc123.31 Carica papaya HOM05D004385 ORTHO05D005245 7.8e-131 471.5 480 54.2
EL10Ac2g04868 Beta vulgaris HOM05D004385 ORTHO05D005245 3.9e-130 469.2 478 52.9
Sc06g0001470 Simmondsia chinensis HOM05D004385 ORTHO05D005245 8.6e-130 468.0 392 57.9
Zm00001eb064440 Zea mays HOM05D004385 ORTHO05D005245 7.1e-124 448.4 392 56.1
PGSC0003DMG400021019 Solanum tuberosum HOM05D004385 ORTHO05D005245 2.5e-121 439.9 343 65.9
PGSC0003DMG400022081 Solanum tuberosum HOM05D004385 ORTHO05D005245 5.4e-116 422.2 457 50.1
TPR.G34194 Trifolium pratense HOM05D004385 ORTHO05D005245 6.6e-114 415.2 325 65.5
unitig_578.g16395 Utricularia gibba HOM05D004385 ORTHO05D005245 6.6e-114 415.2 329 64.7
CAN.G1581.3 Capsicum annuum HOM05D004385 ORTHO05D005245 1.6e-112 410.6 330 63.0
Cfa020737 Carpinus fangiana HOM05D004385 ORTHO05D005245 1.1e-111 407.9 327 62.7
CBR_g2798 Chara braunii HOM05D004385 ORTHO05D005245 4.5e-110 402.5 627 37.8
TAR626G1477 Trochodendron aralioides HOM05D004385 ORTHO05D005245 1.1e-108 397.9 298 65.1
Haze_18802 Corylus avellana HOM05D004385 ORTHO05D005245 1.9e-105 387.1 391 56.3
Atru.chr9.1488 Acer truncatum HOM05D004385 ORTHO05D005245 4.0e-103 379.4 412 50.2
Solyc07g016050.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 5.8e-102 375.6 342 56.1
FAN17G2530 Fragaria x ananassa HOM05D004385 ORTHO05D005245 2.2e-101 373.6 343 57.4
Aqoxy2G04068 Aquilegia oxysepala HOM05D004385 ORTHO05D005245 5.5e-100 369.0 443 48.1
CsaV3_1G004600 Cucumis sativus L. HOM05D004385 ORTHO05D005245 4.2e-92 342.8 239 66.9
CDE06G1657 Ceratophyllum demersum HOM05D004385 ORTHO05D005245 8.5e-85 318.5 452 42.3
Solyc07g016080.4 Solanum lycopersicum HOM05D004385 ORTHO05D005245 3.3e-81 306.6 279 54.1
Migut.L00572 Erythranthe guttata HOM05D004385 ORTHO05D005245 4.1e-79 299.7 217 62.2
Cre02.g105150 Chlamydomonas reinhardtii HOM05D004385 ORTHO05D005245 9.4e-76 288.5 586 35.5
Migut.L00391 Erythranthe guttata HOM05D004385 ORTHO05D005245 9.4e-76 288.5 208 62.0
Solyc07g016030.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 2.4e-71 273.9 347 44.7
EL10Ac6g13794 Beta vulgaris HOM05D004385 ORTHO05D005245 7.9e-67 258.8 257 55.6
SalBow5G2207 Salvia bowleyana HOM05D004385 ORTHO05D005245 1.7e-61 241.1 137 83.2
CAN.G1581.2 Capsicum annuum HOM05D004385 ORTHO05D005245 2.9e-61 240.4 135 83.7
PRCOL_00000420 Prasinoderma coloniale HOM05D004385 ORTHO05D005245 2.1e-59 234.2 453 35.3
FAN07G2444 Fragaria x ananassa HOM05D004385 ORTHO05D005245 2.7e-59 233.8 135 77.8
FAN22G1494 Fragaria x ananassa HOM05D004385 ORTHO05D005245 8.0e-59 232.3 135 77.0
Psat1g029120 Pisum sativum HOM05D000870 ORTHO05D000715 2.6e-57 227.3 143 71.3
Sopen07g016620 Solanum pennellii HOM05D004385 ORTHO05D005245 1.7e-56 224.6 135 78.5
MELO3C017386.2 Cucumis melo HOM05D004385 ORTHO05D005245 2.8e-56 223.8 160 65.0
AUR62020718 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.7e-48 196.8 191 49.7
unitig_578.g16396 Utricularia gibba HOM05D004385 ORTHO05D005245 3.7e-48 196.8 115 80.0
Sopen00g013700 Solanum pennellii HOM05D004385 ORTHO05D005245 1.2e-46 191.8 134 64.9
Solyc07g016020.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 4.4e-41 173.3 135 61.5
Solyc07g016040.3 Solanum lycopersicum HOM05D004385 ORTHO05D005245 1.3e-40 171.8 118 66.9
Sopen07g016630 Solanum pennellii HOM05D004385 ORTHO05D005245 1.7e-40 171.4 185 51.4
AUR62028004 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.8e-39 167.9 122 66.4
AUR62028003 Chenopodium quinoa HOM05D004385 ORTHO05D005245 2.4e-39 167.5 197 49.2
AUR62020720 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.6e-35 153.7 172 45.9
AUR62020721 Chenopodium quinoa HOM05D004385 ORTHO05D005245 3.4e-33 147.1 107 63.6
Solyc07g032590.1 Solanum lycopersicum HOM05D004385 ORTHO05D005245 2.2e-32 144.4 139 56.1
Psat0s3373g0120 Pisum sativum HOM05D000870 ORTHO05D005245 2.4e-31 141.0 142 50.7
PGSC0003DMG400007349 Solanum tuberosum HOM05D004385 ORTHO05D005245 1.1e-23 115.5 76 68.4
AUR62027998 Chenopodium quinoa HOM05D004385 ORTHO05D005245 1.3e-16 92.0 82 50.0
Medtr5g096240 Medicago truncatula HOM05D004385 ORTHO05D005245 1.4e-15 88.6 73 60.3
Medtr4g117010 Medicago truncatula HOM05D004385 ORTHO05D005245 4.1e-15 87.0 73 60.3
GSVIVG01026776001 Vitis vinifera HOM05D004385 ORTHO05D005245 1.3e-13 82.0 66 54.5


User provided reference genes

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