Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00808 Erythranthe guttata HOM05D008710 ORTHO05D010926 8.3e-229 796.6 374 100.0
SalBow8G0453 Salvia bowleyana HOM05D008710 ORTHO05D010926 4.9e-205 717.6 374 88.5
Migut.N01053 Erythranthe guttata HOM05D008710 ORTHO05D010926 8.1e-200 700.3 379 86.8
MSTRG.27850 Avicennia marina HOM05D008710 ORTHO05D010926 9.9e-198 693.3 374 85.6
SalBow3G1941 Salvia bowleyana HOM05D008710 ORTHO05D010926 1.6e-192 676.0 374 82.1
Oeu000123.1 Olea europaea HOM05D008710 ORTHO05D010926 1.9e-188 662.5 374 81.3
Oeu064619.1 Olea europaea HOM05D008710 ORTHO05D010926 1.9e-188 662.5 371 81.7
unitig_22.g6109 Utricularia gibba HOM05D008710 ORTHO05D010926 3.2e-188 661.8 374 82.1
CAN.G16.17 Capsicum annuum HOM05D008710 ORTHO05D010926 3.0e-186 655.2 373 79.6
Nitab4.5_0002039g0010 Nicotiana tabacum HOM05D008710 ORTHO05D010926 3.9e-186 654.8 373 80.2
Nitab4.5_0002453g0020 Nicotiana tabacum HOM05D008710 ORTHO05D010926 9.6e-185 650.2 373 79.6
Peaxi162Scf00152g00154 Petunia axillaris HOM05D008710 ORTHO05D010926 2.1e-184 649.0 373 79.4
Oeu049832.1 Olea europaea HOM05D008710 ORTHO05D010926 1.4e-183 646.4 372 79.3
Sopen11g020080 Solanum pennellii HOM05D008710 ORTHO05D010926 3.4e-182 641.7 373 77.7
SGA_v2.0_scaffold338G49222 Striga asiatica HOM05D008710 ORTHO05D010926 3.8e-181 638.3 373 80.2
PGSC0003DMG400003483 Solanum tuberosum HOM05D008710 ORTHO05D010926 4.6e-179 631.3 361 78.9
Oeu036673.1 Olea europaea HOM05D008710 ORTHO05D010926 6.0e-179 630.9 374 78.9
Solyc11g044510.3 Solanum lycopersicum HOM05D008710 ORTHO05D010926 9.0e-175 617.1 361 76.7
Cc02_g22850 Coffea canephora HOM05D008710 ORTHO05D010926 2.2e-168 595.9 355 78.3
SGA_v2.0_scaffold42G15925 Striga asiatica HOM05D008710 ORTHO05D010926 6.3e-168 594.3 394 70.6
Hma1.2p1_1928F.1_g307840 Hydrangea macrophylla HOM05D008710 ORTHO05D010926 1.5e-166 589.7 374 72.2
Hma1.2p1_2522F.1_g323850 Hydrangea macrophylla HOM05D008710 ORTHO05D010926 1.0e-165 587.0 374 71.9
DCAR_006688 Daucus carota HOM05D008710 ORTHO05D010926 5.3e-159 564.7 373 71.0
Lsat_1_v5_gn_5_105860 Lactuca sativa HOM05D008710 ORTHO05D010926 5.3e-159 564.7 383 69.2
Actinidia39019 Actinidia chinensis HOM05D008710 ORTHO05D010926 2.0e-158 562.8 376 70.7
Hma1.2p1_1108F.1_g257800 Hydrangea macrophylla HOM05D008710 ORTHO05D010926 2.2e-157 559.3 376 68.6
unitig_699.g19855 Utricularia gibba HOM05D008710 ORTHO05D010926 9.4e-156 553.9 324 78.4
DCAR_025350 Daucus carota HOM05D008710 ORTHO05D010926 1.8e-154 549.7 373 68.9
vmacro01737 Vaccinium macrocarpon HOM05D008710 ORTHO05D010926 1.3e-149 533.5 374 66.3
ECA236G3360 Erigeron canadensis HOM05D008710 ORTHO05D010926 8.5e-149 530.8 398 63.1
Rhsim11G0126600 Rhododendron simsii HOM05D008710 ORTHO05D010926 4.2e-148 528.5 375 66.7
DCAR_029263 Daucus carota HOM05D008710 ORTHO05D010926 7.5e-145 517.7 359 67.4
Dinv19391 Davidia involucrata HOM05D000315 ORTHO05D010926 5.9e-134 481.5 335 67.8
HanXRQChr10g0294711 Helianthus annuus HOM05D008710 ORTHO05D010926 5.2e-130 468.4 335 65.7
HanXRQChr16g0513641 Helianthus annuus HOM05D008710 ORTHO05D010926 1.2e-107 394.0 309 62.5
SGA_v2.0_scaffold92G28302 Striga asiatica HOM05D008710 ORTHO05D010926 1.6e-107 393.7 263 71.9
ECA234G2276 Erigeron canadensis HOM05D008710 ORTHO05D010926 2.8e-99 366.3 264 65.5
Actinidia00191 Actinidia chinensis HOM05D008710 ORTHO05D010926 9.2e-95 351.3 312 58.0
CSS0018073 Camellia sinensis var. sinensis HOM05D008710 ORTHO05D010926 1.5e-92 344.0 252 64.7
HanXRQChr10g0294591 Helianthus annuus HOM05D008710 ORTHO05D010926 2.7e-78 296.6 234 59.4
HanXRQChr10g0294561 Helianthus annuus HOM05D008710 ORTHO05D010926 2.6e-73 280.0 183 68.3
Rhsim08G0193600 Rhododendron simsii HOM05D008710 ORTHO05D010926 1.4e-13 81.6 118 36.4
Cfa016920 Carpinus fangiana HOM05D001713 ORTHO05D001669 1.5e-07 61.6 114 36.0
BraA01t04478Z Brassica rapa HOM05D001713 ORTHO05D001669 3.3e-07 60.5 106 35.8
Migut.N02448 Erythranthe guttata HOM05D001713 ORTHO05D001669 3.3e-07 60.5 102 38.2
Haze_09851 Corylus avellana HOM05D001713 ORTHO05D001669 4.3e-07 60.1 114 34.2
Carub.0003s0487 Capsella rubella HOM05D001713 ORTHO05D001669 1.2e-06 58.5 118 35.6
COL.COLO4_10852 Corchorus olitorius HOM05D001713 ORTHO05D001669 3.6e-06 57.0 108 32.4
A01p31850 Brassica napus HOM05D001713 ORTHO05D001669 4.7e-06 56.6 105 35.2
BraA01t03310Z Brassica rapa HOM05D001713 ORTHO05D001669 4.7e-06 56.6 105 35.2
CARHR072160 Cardamine hirsuta HOM05D001713 ORTHO05D001669 4.7e-06 56.6 115 33.0
BcaC09g47837 Brassica carinata HOM05D001713 ORTHO05D001669 8.0e-06 55.8 105 35.2
BolC1t05688H Brassica oleracea HOM05D001713 ORTHO05D001669 8.0e-06 55.8 105 35.2


User provided reference genes

Program Settings