Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 2.1e-31 138.3 64 100.0
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 8.3e-28 126.3 64 89.1
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 1.1e-27 125.9 64 89.1
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 4.1e-27 124.0 64 85.9
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 7.0e-27 123.2 64 87.5
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 2.0e-26 121.7 63 85.7
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 4.5e-26 120.6 63 82.5
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 5.9e-26 120.2 64 85.9
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 5.9e-26 120.2 63 82.5
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 5.9e-26 120.2 63 82.5
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 1.3e-25 119.0 64 81.2
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 2.9e-25 117.9 63 79.4
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 1.1e-24 115.9 72 73.6
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 1.5e-24 115.5 61 82.0
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 1.5e-24 115.5 64 81.2
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.9e-24 115.2 64 78.1
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 1.9e-24 115.2 60 83.3
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 1.9e-24 115.2 60 83.3
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 4.3e-24 114.0 64 76.6
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 7.3e-24 113.2 60 80.0
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 7.3e-24 113.2 64 79.7
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 1.6e-23 112.1 61 78.7
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 2.1e-23 111.7 64 76.6
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 2.1e-23 111.7 64 76.6
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 2.1e-23 111.7 64 76.6
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 2.1e-23 111.7 64 76.6
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 2.8e-23 111.3 64 78.1
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 4.7e-23 110.5 60 80.0
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 8.0e-23 109.8 64 75.0
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 8.0e-23 109.8 64 75.0
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 1.0e-22 109.4 64 78.1
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 1.8e-22 108.6 64 76.6
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 2.3e-22 108.2 64 76.6
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 2.3e-22 108.2 64 76.6
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 3.0e-22 107.8 64 75.0
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 4.0e-22 107.5 63 73.0
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 5.2e-22 107.1 64 75.0
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 5.2e-22 107.1 64 75.0
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 5.2e-22 107.1 59 78.0
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 1.5e-21 105.5 62 75.8
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 2.0e-21 105.1 60 80.0
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 3.4e-21 104.4 62 77.4
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 4.4e-21 104.0 59 78.0
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 1.3e-20 102.4 61 73.8
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 1.7e-20 102.1 64 71.9
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 2.9e-20 101.3 64 73.4
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 3.7e-20 100.9 60 73.3
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 1.8e-19 98.6 74 63.5
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 5.4e-19 97.1 62 74.2
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 7.0e-19 96.7 60 73.3
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 9.2e-19 96.3 58 72.4
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 3.9e-17 90.9 53 71.7
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 8.6e-17 89.7 53 71.7
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 3.3e-16 87.8 62 66.1
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 7.3e-16 86.7 64 64.1
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 1.2e-15 85.9 55 61.8
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 1.2e-15 85.9 58 63.8
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 2.6e-13 78.2 53 62.3
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 5.8e-13 77.0 64 60.9
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 5.8e-13 77.0 64 60.9
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 7.5e-13 76.6 61 54.1
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 2.2e-12 75.1 64 57.8
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 2.2e-12 75.1 64 59.4
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 2.9e-12 74.7 64 59.4
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 2.9e-12 74.7 58 60.3
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 2.9e-12 74.7 59 47.5
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 3.7e-12 74.3 64 59.4
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 3.7e-12 74.3 63 55.6
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 1.1e-11 72.8 45 71.1
CDE02G3423 Ceratophyllum demersum HOM05D007992 ORTHO05D010086 5.0e-09 63.9 63 47.6
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 1.5e-08 62.4 29 93.1
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 2.5e-08 61.6 36 72.2
Migut.B00795 Erythranthe guttata HOM05D007992 ORTHO05D010086 3.3e-08 61.2 29 93.1
SGA_v2.0_scaffold272G46362 Striga asiatica HOM05D007992 ORTHO05D010086 5.6e-08 60.5 29 93.1
PGSC0003DMG400024927 Solanum tuberosum HOM05D007992 ORTHO05D010086 7.3e-08 60.1 57 52.6
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 7.3e-08 60.1 57 47.4
TPR.G17560 Trifolium pratense HOM05D007992 ORTHO05D010086 1.2e-07 59.3 29 89.7
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 1.8e-06 55.5 32 68.8


User provided reference genes

Program Settings