Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 7.7e-224 780.0 358 100.0
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 9.8e-195 683.3 358 88.3
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.2e-194 682.2 358 88.3
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 5.0e-82 308.9 324 48.1
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.4e-76 290.0 343 44.6
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 3.0e-66 256.5 260 48.8
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 1.5e-49 201.1 226 51.3
SGA_v2.0_scaffold279G46810 Striga asiatica HOM05D031079 ORTHO05D005947 4.3e-33 146.4 233 35.2
SGA_v2.0_scaffold279G46801 Striga asiatica HOM05D031079 ORTHO05D005947 1.3e-32 144.8 228 36.0
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.6e-32 144.4 281 31.7
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.8e-31 141.0 293 31.4
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.5e-30 137.9 342 28.7
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 2.6e-30 137.1 281 31.3
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 3.4e-30 136.7 296 31.4
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.0e-29 135.2 283 30.0
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 1.3e-29 134.8 281 31.0
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.3e-29 134.8 293 30.7
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 2.2e-29 134.0 277 31.4
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 4.9e-29 132.9 280 31.8
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 8.4e-29 132.1 271 31.0
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 9.3e-28 128.6 272 31.6
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 2.7e-27 127.1 404 28.2
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 7.9e-27 125.6 269 31.2
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 1.8e-26 124.4 258 33.3
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.8e-26 124.4 258 30.6
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 3.9e-26 123.2 270 29.6
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 5.1e-26 122.9 257 33.9
SGA_v2.0_scaffold279G46806 Striga asiatica HOM05D031079 ORTHO05D005947 5.1e-26 122.9 199 33.7
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 2.5e-25 120.6 348 25.6
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.3e-25 120.2 289 30.4
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 4.3e-25 119.8 229 32.3
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 7.4e-25 119.0 362 26.0
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 7.4e-25 119.0 276 31.9
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 9.7e-25 118.6 278 31.7
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 4.8e-24 116.3 290 29.3
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 1.2e-22 111.7 278 28.4
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.5e-22 111.3 223 31.8
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.6e-22 110.5 222 30.2
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.6e-22 110.5 222 32.0
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.6e-22 110.5 269 28.6
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.4e-22 110.2 222 32.0
PGSC0003DMG400027349 Solanum tuberosum HOM05D007560 ORTHO05D005947 4.5e-22 109.8 270 28.9
Eucgr.H04774 Eucalyptus grandis HOM05D007560 ORTHO05D005947 1.0e-21 108.6 269 28.3
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.7e-21 107.8 222 31.5
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.2e-21 107.5 282 28.7
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 5.0e-21 106.3 252 27.4
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 6.5e-21 105.9 162 37.0
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 6.5e-21 105.9 318 27.4
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 1.1e-20 105.1 292 27.1
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 2.5e-20 104.0 204 33.3
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 2.5e-20 104.0 270 27.4
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-19 101.7 292 28.4
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.7e-19 100.5 266 29.7
Eucgr.H04773 Eucalyptus grandis HOM05D007560 ORTHO05D005947 7.9e-19 99.0 272 27.9
Solyc04g082080.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 1.4e-18 98.2 208 28.4
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.8e-18 97.8 276 28.3
Solyc11g007620.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 8.8e-18 95.5 279 26.5
Lj6A626T22 Lonicera japonica HOM05D007560 ORTHO05D005947 4.3e-17 93.2 270 28.5
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 5.7e-17 92.8 196 31.1
Solyc11g007650.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 5.7e-17 92.8 284 25.7
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 7.4e-17 92.4 217 28.1
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 2.8e-16 90.5 139 30.2
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.8e-16 89.7 339 26.5
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.3e-16 89.4 225 29.3
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.1e-15 88.6 255 24.3
PSO724G0980 Papaver somniferum HOM05D000007 ORTHO05D000676 2.4e-15 87.4 271 25.8
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.4e-15 87.4 217 28.6
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 6.9e-15 85.9 203 28.1
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 1.5e-14 84.7 161 29.2
PSO135G0762 Papaver somniferum HOM05D000007 ORTHO05D000676 1.5e-14 84.7 263 26.2
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-14 84.0 264 25.0
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 4.5e-14 83.2 172 29.7
Peaxi162Scf00738g00112 Petunia axillaris HOM05D007560 ORTHO05D005947 3.8e-13 80.1 136 31.6
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.0e-13 79.7 209 28.7
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.5e-13 79.3 273 25.3
Peaxi162Scf00738g00123 Petunia axillaris HOM05D007560 ORTHO05D005947 6.5e-13 79.3 160 32.5
Zm00001eb014070 Zea mays HOM05D011488 ORTHO05D013340 8.5e-13 79.0 271 26.2
CAN.G1248.7 Capsicum annuum HOM05D015457 ORTHO05D020327 1.1e-12 78.6 248 24.2
Rhsim04G0093700 Rhododendron simsii HOM05D000007 ORTHO05D009073 3.2e-12 77.0 211 30.3
Lj4C614T4 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-12 76.6 99 34.3
Aqoxy2G03976 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 5.5e-12 76.3 265 26.8
Rhsim08G0210600 Rhododendron simsii HOM05D000171 ORTHO05D000101 7.2e-12 75.9 210 26.2
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 1.2e-11 75.1 185 28.1
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-11 75.1 170 31.2
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 2.1e-11 74.3 97 42.3
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.1e-11 74.3 170 31.2
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.7e-11 73.9 159 29.6
Peaxi162Scf01051g00144 Petunia axillaris HOM05D015457 ORTHO05D020327 6.1e-11 72.8 250 24.0
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.1e-11 72.8 165 27.9
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.1e-11 72.8 152 30.3
Aqoxy7G01104 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.4e-10 71.6 271 23.6
RhsimUnG0048800 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.4e-10 71.6 204 26.5
Nitab4.5_0000800g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.7e-10 69.3 143 36.4
Zm00001eb014060 Zea mays HOM05D011488 ORTHO05D013340 6.7e-10 69.3 269 26.8
Migut.A00778 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.1e-09 68.6 281 22.8
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.5e-09 68.2 166 28.3
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 2.0e-09 67.8 210 26.7
Rhsim08G0197100 Rhododendron simsii HOM05D000171 ORTHO05D000101 5.7e-09 66.2 214 26.6
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 9.7e-09 65.5 273 25.3
Lj5A667T12 Lonicera japonica HOM05D007560 ORTHO05D005947 9.7e-09 65.5 81 39.5
Aqoxy7G01380 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.7e-08 64.7 270 24.4
Rhsim03G0071300 Rhododendron simsii HOM05D000171 ORTHO05D004496 1.7e-08 64.7 220 25.0
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 1.7e-08 64.7 134 30.6
Solyc01g102320.2 Solanum lycopersicum HOM05D015457 ORTHO05D020327 2.2e-08 64.3 237 26.2
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.8e-08 63.9 169 28.4
Eucgr.K01324 Eucalyptus grandis HOM05D000007 ORTHO05D003666 3.7e-08 63.5 213 24.9
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.7e-08 63.5 233 24.0
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.7e-08 63.5 201 28.4
TAR375G0750 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.7e-08 63.5 246 22.8
COL.COLO4_03806 Corchorus olitorius HOM05D023542 ORTHO05D005947 4.8e-08 63.2 253 24.5
PSO135G0632 Papaver somniferum HOM05D000007 ORTHO05D000676 4.8e-08 63.2 186 29.0
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.8e-08 63.2 178 24.2
AUR62025916 Chenopodium quinoa HOM05D007922 ORTHO05D009490 6.3e-08 62.8 151 26.5
Ciclev10011877m.g Citrus clementina HOM05D000007 ORTHO05D000017 8.2e-08 62.4 271 23.2
MD11G1124100 Malus domestica HOM05D000007 ORTHO05D009073 8.2e-08 62.4 165 26.7
Nitab4.5_0000593g0030 Nicotiana tabacum HOM05D007560 ORTHO05D005947 8.2e-08 62.4 109 31.2
Rhsim03G0071900 Rhododendron simsii HOM05D000007 ORTHO05D009073 8.2e-08 62.4 296 22.0
Actinidia13258 Actinidia chinensis HOM05D007726 ORTHO05D008819 1.1e-07 62.0 190 25.3
PGSC0003DMG400017974 Solanum tuberosum HOM05D015457 ORTHO05D020327 1.1e-07 62.0 138 28.3
Migut.M00201 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.4e-07 61.6 201 24.9
Os11g0131300 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 1.4e-07 61.6 189 24.3
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 2.4e-07 60.8 179 27.4
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 2.4e-07 60.8 163 28.8
Os04g0193300 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 3.1e-07 60.5 200 26.5
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.1e-07 60.5 142 28.2
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 5.3e-07 59.7 176 27.8
Rhsim11G0103800 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.3e-07 59.7 97 28.9
FvH4_6g14781 Fragaria vesca HOM05D003981 ORTHO05D003666 9.1e-07 58.9 218 23.4
FAN14G2468 Fragaria x ananassa HOM05D003981 ORTHO05D003666 9.1e-07 58.9 218 23.4
MBI15_g33468_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 9.1e-07 58.9 251 25.9
FAN07G0986 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.2e-06 58.5 233 23.6
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.2e-06 58.5 202 24.8
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-06 58.5 162 25.3
AUR62009273 Chenopodium quinoa HOM05D000007 ORTHO05D004974 1.5e-06 58.2 186 29.0
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 1.5e-06 58.2 180 26.7
Dinv34353 Davidia involucrata HOM05D000007 ORTHO05D000521 2.0e-06 57.8 255 22.7
FAN17G1570 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.0e-06 57.8 233 23.6
MBI15_g31025_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 2.0e-06 57.8 207 24.6
PSO478G2712 Papaver somniferum HOM05D000007 ORTHO05D000017 2.0e-06 57.8 182 22.5
TWI59G0188 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 2.6e-06 57.4 249 22.9
FvH4_4g34580 Fragaria vesca HOM05D003981 ORTHO05D003666 3.5e-06 57.0 221 24.4
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 3.5e-06 57.0 173 27.2
Cpa.g.sc483.2 Carica papaya HOM05D000007 ORTHO05D000521 4.5e-06 56.6 267 24.3
FvH4_4g34520 Fragaria vesca HOM05D003981 ORTHO05D003666 4.5e-06 56.6 219 24.7
FAN06G0788 Fragaria x ananassa HOM05D000007 ORTHO05D000017 4.5e-06 56.6 204 23.5
FAN12G3036 Fragaria x ananassa HOM05D003981 ORTHO05D003666 4.5e-06 56.6 221 24.4
Rhsim05G0180800 Rhododendron simsii HOM05D000007 ORTHO05D000017 4.5e-06 56.6 214 21.5
COL.COLO4_10484 Corchorus olitorius HOM05D013022 ORTHO05D007252 5.9e-06 56.2 139 27.3
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 5.9e-06 56.2 283 22.6
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 5.9e-06 56.2 283 22.6
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 7.7e-06 55.8 131 29.8
COL.COLO4_13509 Corchorus olitorius HOM05D023542 ORTHO05D005947 7.7e-06 55.8 76 34.2
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.7e-06 55.8 222 23.4


User provided reference genes

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