Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.6e-221 772.3 356 100.0
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 6.7e-220 766.9 356 99.4
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 2.8e-194 681.8 358 88.3
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 6.3e-85 318.5 325 48.6
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.3e-77 294.3 323 46.7
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.1e-65 254.6 260 50.0
Migut.C00457 Erythranthe guttata HOM05D031079 ORTHO05D005947 3.2e-44 183.3 225 49.3
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.3e-33 146.7 337 30.9
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.1e-31 140.2 325 29.8
SGA_v2.0_scaffold279G46810 Striga asiatica HOM05D031079 ORTHO05D005947 5.3e-31 139.4 233 34.3
SGA_v2.0_scaffold279G46801 Striga asiatica HOM05D031079 ORTHO05D005947 2.2e-29 134.0 226 34.5
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.4e-28 130.6 283 29.7
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.2e-28 130.2 283 31.4
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-28 129.8 350 28.9
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 4.2e-28 129.8 271 30.3
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 2.1e-27 127.5 274 29.9
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.5e-27 126.7 269 30.9
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 4.6e-27 126.3 406 25.4
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 7.9e-27 125.6 281 31.0
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 2.3e-26 124.0 281 30.2
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 3.0e-26 123.6 269 31.2
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.0e-26 123.6 286 29.7
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 6.7e-26 122.5 273 31.1
CAN.G135.62 Capsicum annuum HOM05D007560 ORTHO05D005947 1.1e-25 121.7 257 33.1
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.5e-25 121.3 267 31.5
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 1.5e-25 121.3 229 32.3
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 1.9e-25 120.9 268 31.3
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 4.3e-25 119.8 258 32.9
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 5.6e-25 119.4 278 29.5
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 7.4e-25 119.0 275 31.6
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 1.6e-24 117.9 334 27.5
SGA_v2.0_scaffold279G46806 Striga asiatica HOM05D031079 ORTHO05D005947 8.1e-24 115.5 203 34.5
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.1e-23 115.2 258 29.8
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.4e-23 114.8 251 31.1
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 2.6e-22 110.5 231 30.7
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.5e-22 109.8 307 27.4
PGSC0003DMG400027349 Solanum tuberosum HOM05D007560 ORTHO05D005947 4.5e-22 109.8 277 28.9
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 5.8e-22 109.4 145 42.1
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 5.8e-22 109.4 252 28.6
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.3e-21 108.2 230 30.4
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.7e-21 107.8 230 30.4
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 6.4e-21 105.9 230 28.3
CAN.G135.61 Capsicum annuum HOM05D007560 ORTHO05D005947 6.4e-21 105.9 204 33.3
Eucgr.H04774 Eucalyptus grandis HOM05D007560 ORTHO05D005947 6.4e-21 105.9 260 26.2
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 6.4e-21 105.9 270 28.5
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 8.4e-21 105.5 163 36.8
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 8.4e-21 105.5 230 30.0
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.4e-20 104.0 267 29.6
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 2.4e-20 104.0 270 28.9
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 3.2e-20 103.6 318 26.4
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 7.1e-20 102.4 270 29.6
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 4.6e-19 99.8 251 27.1
Solyc04g082080.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 1.3e-18 98.2 208 27.9
Eucgr.H04773 Eucalyptus grandis HOM05D007560 ORTHO05D005947 3.0e-18 97.1 261 27.2
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 3.0e-18 97.1 246 27.2
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 5.1e-18 96.3 205 30.2
Solyc11g007620.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 6.7e-18 95.9 286 27.3
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.7e-18 95.5 277 27.8
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 8.7e-18 95.5 233 28.8
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.6e-17 92.8 218 29.4
Solyc11g007650.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 1.3e-16 91.7 282 27.0
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 2.1e-16 90.9 139 32.4
Lj6A626T22 Lonicera japonica HOM05D007560 ORTHO05D005947 3.7e-16 90.1 266 28.6
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 4.8e-16 89.7 201 27.9
Aqoxy5G04187 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.8e-15 87.8 333 26.1
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 1.2e-14 85.1 161 30.4
Aqoxy5G01432 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-14 84.0 211 28.4
Aqoxy5G01975 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-14 84.0 256 24.6
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.6e-14 84.0 269 24.5
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 4.5e-14 83.2 188 29.3
Peaxi162Scf00738g00123 Petunia axillaris HOM05D007560 ORTHO05D005947 1.0e-13 82.0 160 32.5
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.2e-13 80.9 209 29.2
Aqoxy7G01104 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.9e-13 80.5 303 24.4
CAN.G1248.7 Capsicum annuum HOM05D015457 ORTHO05D020327 4.9e-13 79.7 253 24.9
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.4e-13 79.0 171 32.2
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-12 78.2 171 32.2
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.9e-12 77.8 318 24.8
Peaxi162Scf00738g00112 Petunia axillaris HOM05D007560 ORTHO05D005947 3.2e-12 77.0 143 30.1
TAR371G0533 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.2e-12 76.6 190 27.9
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 2.1e-11 74.3 157 29.9
Lj4C614T4 Lonicera japonica HOM05D007560 ORTHO05D005947 3.5e-11 73.6 99 34.3
Peaxi162Scf01051g00144 Petunia axillaris HOM05D015457 ORTHO05D020327 7.9e-11 72.4 257 25.3
Rhsim04G0093700 Rhododendron simsii HOM05D000007 ORTHO05D009073 7.9e-11 72.4 197 28.9
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.9e-11 72.4 150 30.7
Zm00001eb014070 Zea mays HOM05D011488 ORTHO05D013340 7.9e-11 72.4 266 25.2
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 1.0e-10 72.0 184 27.2
TAR371G0093 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.0e-10 72.0 165 30.3
Rhsim08G0210600 Rhododendron simsii HOM05D000171 ORTHO05D000101 3.0e-10 70.5 209 25.4
RhsimUnG0048800 Rhododendron simsii HOM05D000171 ORTHO05D000101 3.9e-10 70.1 202 26.7
Peaxi162Scf00738g00116 Petunia axillaris HOM05D007560 ORTHO05D005947 5.1e-10 69.7 97 39.2
Nitab4.5_0000800g0010 Nicotiana tabacum HOM05D007560 ORTHO05D005947 6.7e-10 69.3 148 34.5
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.7e-10 69.3 242 24.8
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.5e-09 68.2 190 26.8
Solyc01g102320.2 Solanum lycopersicum HOM05D015457 ORTHO05D020327 2.5e-09 67.4 236 26.3
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.5e-09 67.4 197 26.4
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.5e-09 67.4 164 28.7
PSO210G2013 Papaver somniferum HOM05D000007 ORTHO05D000676 4.3e-09 66.6 174 28.7
Zm00001eb014060 Zea mays HOM05D011488 ORTHO05D013340 4.3e-09 66.6 215 27.9
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.4e-09 65.9 164 26.8
Os11g0131300 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 9.6e-09 65.5 187 25.1
TAR371G0451 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.3e-08 65.1 194 27.8
Rhsim08G0197100 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.6e-08 64.7 211 26.1
TAR371G0023 Trochodendron aralioides HOM05D000007 ORTHO05D022563 1.6e-08 64.7 138 28.3
Atru.chr5.2443 Acer truncatum HOM05D003981 ORTHO05D003666 2.8e-08 63.9 202 26.2
Os12g0128000 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 3.7e-08 63.5 243 23.9
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.8e-08 63.2 213 27.2
Rhsim03G0071300 Rhododendron simsii HOM05D000171 ORTHO05D004496 4.8e-08 63.2 163 25.8
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 6.3e-08 62.8 191 25.7
Lj5A667T12 Lonicera japonica HOM05D007560 ORTHO05D005947 6.3e-08 62.8 78 39.7
Os04g0193300 Oryza sativa ssp. japonica HOM05D011488 ORTHO05D013340 6.3e-08 62.8 197 26.4
Nitab4.5_0000593g0030 Nicotiana tabacum HOM05D007560 ORTHO05D005947 8.2e-08 62.4 161 29.2
Rhsim03G0071900 Rhododendron simsii HOM05D000007 ORTHO05D009073 8.2e-08 62.4 163 24.5
Cfa003137 Carpinus fangiana HOM05D000007 ORTHO05D000017 1.4e-07 61.6 267 21.3
Nitab4.5_0000008g0620 Nicotiana tabacum HOM05D008437 ORTHO05D010577 1.4e-07 61.6 244 23.4
PSO017G7158 Papaver somniferum HOM05D008691 ORTHO05D005947 1.4e-07 61.6 244 25.0
Rhsim11G0104100 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.4e-07 61.6 180 23.9
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-07 61.6 141 27.0
Aqoxy7G01380 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.8e-07 61.2 318 24.2
Prupe.1G285300 Prunus persica HOM05D000007 ORTHO05D009073 1.8e-07 61.2 194 25.8
Aqoxy4G00563 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 2.4e-07 60.8 208 25.0
COL.COLO4_03806 Corchorus olitorius HOM05D023542 ORTHO05D005947 2.4e-07 60.8 253 25.3
Os10g0396100 Oryza sativa ssp. japonica HOM05D052456 ORTHO05D000017 2.4e-07 60.8 216 23.6
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 2.4e-07 60.8 175 27.4
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.1e-07 60.5 148 29.7
PSO339G4378 Papaver somniferum HOM05D008691 ORTHO05D005947 3.1e-07 60.5 275 24.0
TAR371G1227 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.1e-07 60.5 95 34.7
HanXRQChr05g0146471 Helianthus annuus HOM05D000171 ORTHO05D000101 5.3e-07 59.7 184 29.3
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 6.9e-07 59.3 171 25.1
Ciclev10011877m.g Citrus clementina HOM05D000007 ORTHO05D000017 6.9e-07 59.3 275 23.6
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 9.0e-07 58.9 180 26.1
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 9.0e-07 58.9 191 25.7
RcHm_v2.0_Chr3g0480281 Rosa chinensis HOM05D003981 ORTHO05D003666 9.0e-07 58.9 158 27.8
TAR375G0750 Trochodendron aralioides HOM05D000007 ORTHO05D007252 9.0e-07 58.9 189 23.3
Rhsim11G0103800 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.2e-06 58.5 99 31.3
TWI59G0188 Tripterygium wilfordii HOM05D003981 ORTHO05D003666 1.2e-06 58.5 248 23.8
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 1.5e-06 58.2 178 25.3
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 1.5e-06 58.2 98 29.6
Zm00001eb387810 Zea mays HOM05D000007 ORTHO05D013340 1.5e-06 58.2 190 25.8
MBI15_g33468_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 2.0e-06 57.8 252 24.2
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 2.0e-06 57.8 162 26.5
PGSC0003DMG400017974 Solanum tuberosum HOM05D015457 ORTHO05D020327 2.0e-06 57.8 139 28.1
FAN16G2932 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.4e-06 57.0 119 26.9
Rhsim05G0180800 Rhododendron simsii HOM05D000007 ORTHO05D000017 3.4e-06 57.0 213 21.6
PGSC0003DMG400034923 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.4e-06 57.0 193 26.4
TAR371G0432 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.4e-06 57.0 162 26.5
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 3.4e-06 57.0 175 26.9
COL.COLO4_13509 Corchorus olitorius HOM05D023542 ORTHO05D005947 5.9e-06 56.2 76 35.5
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 7.6e-06 55.8 252 24.2
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 7.6e-06 55.8 252 24.2


User provided reference genes

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