Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 4.1e-273 944.1 473 100.0
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 6.2e-229 797.3 457 82.5
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 4.4e-219 764.6 459 80.6
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 6.6e-215 750.7 457 78.1
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 4.6e-208 728.0 461 74.6
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 2.1e-205 719.2 456 74.8
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.2e-203 713.4 458 74.5
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.7e-202 709.5 456 74.1
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 2.4e-201 705.7 458 73.8
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 3.2e-201 705.3 429 78.1
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 9.3e-201 703.7 462 75.3
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.2e-200 703.4 459 73.6
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 1.2e-200 703.4 458 73.1
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 3.5e-200 701.8 436 76.1
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 7.9e-200 700.7 458 73.1
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 2.3e-199 699.1 459 72.8
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 2.5e-198 695.7 456 73.0
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 7.4e-198 694.1 461 73.5
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 1.6e-197 693.0 461 73.3
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 3.7e-197 691.8 457 72.4
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 4.8e-197 691.4 456 72.4
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 1.2e-195 686.8 473 72.3
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.0e-195 686.0 458 71.6
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 3.4e-195 685.3 460 71.3
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 3.4e-195 685.3 456 71.5
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 4.5e-195 684.9 460 71.5
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 4.5e-195 684.9 451 72.9
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 4.5e-195 684.9 458 71.4
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 5.8e-195 684.5 456 71.9
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 1.3e-194 683.3 458 71.4
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.3e-194 683.3 458 71.0
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 1.7e-194 682.9 458 71.4
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 2.9e-194 682.2 456 72.4
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 8.4e-194 680.6 456 70.6
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 8.4e-194 680.6 460 72.4
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.1e-193 680.2 456 70.6
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 2.4e-193 679.1 456 70.8
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 3.2e-193 678.7 456 70.4
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 4.2e-193 678.3 478 69.9
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 3.5e-192 675.2 456 71.3
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 1.4e-188 663.3 464 69.2
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.4e-188 663.3 428 72.9
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 2.4e-188 662.5 430 73.3
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 4.0e-188 661.8 476 68.3
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 6.9e-188 661.0 430 73.0
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 3.4e-187 658.7 469 68.9
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 7.6e-187 657.5 439 70.2
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.0e-186 657.1 458 67.9
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.2e-186 656.0 435 72.4
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 4.6e-184 648.3 449 70.8
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 6.0e-184 647.9 462 67.5
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.3e-183 646.7 483 65.4
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 1.5e-182 643.3 457 68.7
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 4.3e-182 641.7 437 70.0
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 4.3e-182 641.7 437 70.3
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 4.3e-182 641.7 437 70.0
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 5.7e-182 641.3 445 68.5
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 3.7e-181 638.6 458 68.1
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 8.2e-181 637.5 438 69.6
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 1.1e-180 637.1 446 68.4
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 1.1e-180 637.1 445 68.5
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 1.4e-180 636.7 430 69.8
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 6.9e-180 634.4 438 69.2
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 6.9e-180 634.4 457 66.5
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 4.5e-179 631.7 432 69.7
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 5.9e-179 631.3 445 67.4
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 1.3e-178 630.2 457 66.7
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 6.5e-178 627.9 425 70.1
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 6.5e-178 627.9 460 66.7
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 1.4e-177 626.7 434 69.6
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 7.9e-176 620.9 476 64.1
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 3.0e-175 619.0 459 65.8
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 6.7e-175 617.8 431 69.1
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 3.3e-174 615.5 437 66.8
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 3.3e-174 615.5 472 64.2
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 4.3e-174 615.1 365 77.8
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 2.8e-173 612.5 470 63.4
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 4.8e-173 611.7 451 66.3
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 1.4e-172 610.1 364 77.7
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 2.4e-172 609.4 444 68.5
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 2.9e-170 602.4 451 64.7
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 4.7e-168 595.1 442 65.4
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 6.7e-167 591.3 383 72.3
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 2.2e-165 586.3 385 68.6
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 4.8e-165 585.1 463 63.9
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 4.5e-163 578.6 440 63.4
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 5.9e-163 578.2 383 72.3
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 2.9e-162 575.9 393 68.4
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 3.9e-159 565.5 466 60.3
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 4.5e-155 552.0 431 63.3
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 5.9e-155 551.6 438 63.2
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 2.2e-154 549.7 449 61.0
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 1.7e-146 523.5 331 74.0
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 1.8e-143 513.5 377 65.0
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.8e-143 513.5 429 60.1
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 2.7e-131 473.0 465 54.6
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 7.8e-115 418.3 325 65.5
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 8.9e-103 378.3 212 83.0
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 1.2e-102 377.9 456 45.2
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.7e-98 364.0 382 48.7
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 5.2e-95 352.4 259 69.5
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 4.4e-94 349.4 457 43.8
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 1.0e-90 338.2 220 74.5
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 2.9e-85 320.1 259 62.5
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 1.5e-81 307.8 321 53.6
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 1.4e-68 264.6 159 76.7
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 1.4e-68 264.6 258 52.3
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 5.3e-63 246.1 155 76.1
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 7.2e-44 182.6 128 67.2
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 3.1e-39 167.2 247 41.7
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.1e-28 132.1 123 54.5
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 1.5e-25 121.7 73 78.1
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 3.4e-25 120.6 70 77.1
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.1e-23 114.0 121 50.4
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 1.6e-22 111.7 80 66.2
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 4.2e-20 103.6 130 48.5
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 9.5e-20 102.4 113 42.5
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 1.0e-18 99.0 88 58.0
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 2.6e-09 67.8 98 45.9


User provided reference genes

Program Settings