Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 0.0e+00 1270.0 732 100.0
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 3.1e-296 1021.5 733 78.7
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 2.3e-291 1005.4 703 81.7
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 1.1e-261 906.7 733 70.3
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 5.0e-254 881.3 733 67.8
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.3e-249 866.7 736 66.6
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 1.9e-248 862.8 733 66.6
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 2.4e-248 862.4 733 66.7
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 1.7e-246 856.3 754 65.0
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 4.3e-245 851.7 762 64.7
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 6.2e-244 847.8 736 65.8
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 7.5e-242 840.9 733 65.3
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 2.2e-241 839.3 733 64.7
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 1.4e-240 836.6 733 64.5
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 4.6e-239 831.6 737 64.5
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 6.0e-239 831.2 733 64.8
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 2.5e-237 825.9 735 64.4
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 3.1e-235 818.9 736 64.5
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 4.0e-235 818.5 733 63.0
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 5.2e-235 818.1 733 64.0
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 3.9e-230 802.0 735 63.0
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 1.1e-229 800.4 714 65.0
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 7.3e-229 797.7 732 63.4
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 8.9e-227 790.8 733 62.6
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 8.9e-227 790.8 734 62.7
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 1.2e-226 790.4 820 57.6
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 1.5e-226 790.0 723 63.5
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 2.6e-226 789.3 735 64.1
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 3.4e-226 788.9 672 67.3
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.3e-225 786.9 737 62.3
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 1.1e-224 783.9 733 62.5
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 7.1e-224 781.2 736 61.4
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 3.5e-223 778.9 733 61.4
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 5.1e-222 775.0 735 61.2
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 8.7e-222 774.2 703 62.0
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 8.7e-222 774.2 736 62.5
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 1.9e-221 773.1 735 61.0
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 2.5e-221 772.7 733 61.8
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 4.7e-220 768.5 733 60.7
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 8.1e-220 767.7 740 60.5
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 8.1e-220 767.7 695 62.7
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 1.5e-218 763.5 734 60.1
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 2.0e-218 763.1 735 60.7
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 3.4e-218 762.3 731 59.2
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 9.9e-218 760.8 737 60.4
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 1.3e-217 760.4 671 63.9
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 4.9e-217 758.4 735 59.3
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.9e-216 756.5 672 63.2
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.9e-216 756.5 671 63.5
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 1.0e-214 750.7 734 59.0
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 1.3e-214 750.4 742 58.4
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 1.7e-214 750.0 734 63.2
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 6.6e-214 748.0 737 59.0
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 6.6e-214 748.0 738 58.5
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.9e-213 746.5 735 60.3
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 2.5e-213 746.1 822 56.1
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 2.1e-212 743.0 733 60.2
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 1.8e-211 740.0 735 58.4
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 3.4e-210 735.7 736 57.9
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 4.9e-209 731.9 735 58.5
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 6.4e-209 731.5 731 57.6
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.1e-208 730.7 702 60.4
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 1.3e-206 723.8 733 58.4
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 3.9e-206 722.2 733 59.1
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 1.9e-205 719.9 735 57.8
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 7.4e-205 718.0 736 58.6
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 1.4e-203 713.8 733 56.9
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 2.6e-202 709.5 735 58.1
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 5.8e-202 708.4 704 58.9
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 1.4e-200 703.7 733 56.8
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 1.6e-199 700.3 735 61.0
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 6.7e-198 694.9 735 56.6
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 6.7e-198 694.9 735 56.6
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 8.7e-198 694.5 730 58.8
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 8.7e-198 694.5 706 58.5
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 7.4e-197 691.4 755 54.7
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.8e-196 688.7 734 56.8
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 4.5e-194 682.2 706 58.5
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 8.4e-193 677.9 674 60.7
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.6e-191 673.7 804 52.7
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 3.9e-190 669.1 705 57.4
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 5.1e-190 668.7 735 55.1
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 3.3e-189 666.0 735 57.1
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 7.4e-189 664.8 735 56.2
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 4.8e-188 662.1 735 55.6
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.1e-176 624.4 671 56.3
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 1.8e-174 617.1 786 49.7
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 1.3e-172 610.9 741 51.8
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 1.1e-168 597.8 733 51.4
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 3.2e-152 543.1 735 47.9
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 4.2e-152 542.7 598 55.9
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 1.4e-139 501.1 577 51.8
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 2.0e-138 497.3 363 73.8
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.3e-132 478.0 359 71.6
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 4.6e-122 443.0 301 76.4
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 8.3e-116 422.2 282 80.1
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.6e-112 409.5 506 50.4
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 1.6e-111 407.9 593 46.7
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 3.1e-110 403.7 437 56.8
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 7.3e-104 382.5 435 54.9
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 4.4e-101 373.2 382 57.6
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 4.8e-87 326.6 695 34.5
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.5e-85 321.6 345 58.6
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 2.2e-76 291.2 270 64.4
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 2.5e-75 287.7 668 31.9
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 3.1e-70 270.8 444 43.7
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 5.0e-68 263.5 673 31.5
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.5e-67 261.2 697 32.3
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 1.5e-64 251.9 711 29.5
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 9.7e-64 249.2 345 47.2
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 9.7e-64 249.2 656 33.8
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 1.1e-62 245.7 505 38.8
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.2e-34 152.5 134 64.9
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 4.3e-27 127.5 104 66.3
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 3.6e-26 124.4 84 70.2
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 1.6e-21 109.0 510 24.9
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.6e-21 109.0 144 47.9
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.3e-17 95.1 119 43.7
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 6.8e-17 93.6 121 45.5
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 1.3e-15 89.4 94 50.0
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.4e-14 85.1 75 68.0
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 4.1e-14 84.3 100 53.0
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 1.6e-13 82.4 118 38.1
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 2.7e-13 81.6 168 40.5
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 3.9e-12 77.8 103 44.7
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 3.9e-12 77.8 241 31.1
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.1e-11 76.3 67 59.7
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 4.7e-10 70.9 56 64.3
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.2e-08 66.2 137 35.0
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 7.5e-08 63.5 41 80.5
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 4.9e-07 60.8 70 51.4


User provided reference genes

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