Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00706 Erythranthe guttata HOM05D005661 ORTHO05D007997 4.3e-170 601.3 312 100.0
MSTRG.16459 Avicennia marina HOM05D005661 ORTHO05D007997 4.5e-119 431.8 308 75.6
Oeu000159.1 Olea europaea HOM05D005661 ORTHO05D007997 3.8e-118 428.7 313 75.7
CAN.G1379.8 Capsicum annuum HOM05D005661 ORTHO05D007997 1.5e-114 416.8 315 74.0
MSTRG.20341 Avicennia marina HOM05D005661 ORTHO05D007997 7.4e-114 414.5 313 74.1
Nitab4.5_0001085g0130 Nicotiana tabacum HOM05D005661 ORTHO05D007997 4.8e-113 411.8 315 73.3
PGSC0003DMG401018218 Solanum tuberosum HOM05D005661 ORTHO05D007997 1.8e-112 409.8 313 74.1
Dinv38445 Davidia involucrata HOM05D005661 ORTHO05D007997 2.4e-112 409.5 312 73.1
HanXRQChr05g0153021 Helianthus annuus HOM05D005661 ORTHO05D007997 2.4e-112 409.5 311 73.3
Nitab4.5_0006159g0030 Nicotiana tabacum HOM05D005661 ORTHO05D007997 4.5e-111 405.2 315 72.7
Manes.14G146200 Manihot esculenta HOM05D005661 ORTHO05D007997 5.9e-111 404.8 299 73.6
Solyc01g102820.4 Solanum lycopersicum HOM05D005661 ORTHO05D007997 5.9e-111 404.8 312 73.1
Sopen01g045220 Solanum pennellii HOM05D005661 ORTHO05D007997 5.9e-111 404.8 312 73.1
Ciclev10002035m.g Citrus clementina HOM05D005661 ORTHO05D007997 1.3e-110 403.7 245 82.4
Lsat_1_v5_gn_9_124861 Lactuca sativa HOM05D005661 ORTHO05D007997 1.3e-110 403.7 312 71.5
CSS0021874 Camellia sinensis var. sinensis HOM05D005661 ORTHO05D007997 6.5e-110 401.4 286 75.5
Thecc.06G064100 Theobroma cacao HOM05D005661 ORTHO05D007997 6.5e-110 401.4 243 83.5
Eucgr.I02806 Eucalyptus grandis HOM05D005661 ORTHO05D007997 1.1e-109 400.6 245 82.9
Peaxi162Scf00194g01045 Petunia axillaris HOM05D005661 ORTHO05D007997 1.4e-109 400.2 233 86.7
unitig_21.g20570 Utricularia gibba HOM05D005661 ORTHO05D007997 1.4e-109 400.2 319 69.9
Gorai.010G134700 Gossypium raimondii HOM05D005661 ORTHO05D007997 4.2e-109 398.7 275 76.0
Actinidia11729 Actinidia chinensis HOM05D005661 ORTHO05D007997 5.5e-109 398.3 319 70.5
Aqoxy1G02010 Aquilegia oxysepala HOM05D005661 ORTHO05D007997 9.4e-109 397.5 245 81.6
GSVIVG01023131001 Vitis vinifera HOM05D005661 ORTHO05D007997 9.4e-109 397.5 308 70.1
ECA246G0516 Erigeron canadensis HOM05D005661 ORTHO05D007997 1.0e-107 394.0 307 70.0
Gohir.D06G117100 Gossypium hirsutum HOM05D005661 ORTHO05D007997 3.0e-107 392.5 296 71.6
QL02p103676 Quercus lobata HOM05D005661 ORTHO05D007997 3.9e-107 392.1 244 82.0
Gohir.A06G112500 Gossypium hirsutum HOM05D005661 ORTHO05D007997 5.2e-107 391.7 296 72.3
HanXRQChr09g0249911 Helianthus annuus HOM05D005661 ORTHO05D007997 6.7e-107 391.3 223 87.4
CARHR145060 Cardamine hirsuta HOM05D005661 ORTHO05D007997 1.1e-106 390.6 294 71.4
Rhsim11G0115300 Rhododendron simsii HOM05D005661 ORTHO05D007997 1.5e-106 390.2 247 81.8
Carub.0005s0153 Capsella rubella HOM05D005661 ORTHO05D007997 2.0e-106 389.8 297 71.0
Manes.14G166900 Manihot esculenta HOM05D005661 ORTHO05D007997 3.3e-106 389.0 297 71.7
AT2G02500 Arabidopsis thaliana HOM05D005661 ORTHO05D007997 5.7e-106 388.3 293 71.3
TAR628G0241 Trochodendron aralioides HOM05D005661 ORTHO05D007997 5.7e-106 388.3 313 68.1
CsaV3_3G006740 Cucumis sativus L. HOM05D005661 ORTHO05D007997 1.3e-105 387.1 303 70.0
PSO210G4998 Papaver somniferum HOM05D005661 ORTHO05D007997 1.3e-105 387.1 297 70.7
Potri.004G230200 Populus trichocarpa HOM05D005661 ORTHO05D007997 1.7e-105 386.7 314 69.1
THA.LOC104801778 Tarenaya hassleriana HOM05D005661 ORTHO05D007997 1.7e-105 386.7 317 68.5
AL5G11770 Arabidopsis lyrata HOM05D005661 ORTHO05D007997 2.2e-105 386.3 256 77.3
Aa31LG2G7610 Aethionema arabicum HOM05D005661 ORTHO05D007997 2.8e-105 386.0 298 69.5
Nn5g27134 Nelumbo nucifera HOM05D005661 ORTHO05D007997 3.7e-105 385.6 312 67.3
Psat0s2555g0200 Pisum sativum HOM05D005661 ORTHO05D007997 3.7e-105 385.6 246 80.1
BcaB07g30331 Brassica carinata HOM05D005661 ORTHO05D007997 6.3e-105 384.8 300 69.7
Cc02_g23630 Coffea canephora HOM05D005661 ORTHO05D007997 6.3e-105 384.8 325 67.1
FAN04G2212 Fragaria x ananassa HOM05D005661 ORTHO05D007997 6.3e-105 384.8 229 85.2
PGR142G1782 Punica granatum HOM05D005661 ORTHO05D007997 8.2e-105 384.4 275 72.4
Sc09g0007750 Simmondsia chinensis HOM05D005661 ORTHO05D007997 8.2e-105 384.4 268 72.0
TPR.G5996 Trifolium pratense HOM05D005661 ORTHO05D007997 8.2e-105 384.4 243 81.5
MD15G1444200 Malus domestica HOM05D005661 ORTHO05D007997 1.1e-104 384.0 264 76.1
Glyma.17G002400 Glycine max HOM05D005661 ORTHO05D007997 1.4e-104 383.6 236 81.4
Prupe.1G586600 Prunus persica HOM05D005661 ORTHO05D007997 1.4e-104 383.6 308 71.8
MELO3C016431.2 Cucumis melo HOM05D005661 ORTHO05D007997 1.8e-104 383.3 226 84.1
DCAR_031998 Daucus carota HOM05D005661 ORTHO05D007997 1.8e-104 383.3 310 68.1
C02p50650 Brassica napus HOM05D005661 ORTHO05D007997 4.1e-104 382.1 246 78.5
FvH4_5g27480 Fragaria vesca HOM05D005661 ORTHO05D007997 4.1e-104 382.1 292 71.9
A02p32920 Brassica napus HOM05D005661 ORTHO05D007997 5.3e-104 381.7 300 70.0
BraA02t08315Z Brassica rapa HOM05D005661 ORTHO05D007997 7.0e-104 381.3 306 68.6
Cfa004424 Carpinus fangiana HOM05D005661 ORTHO05D007997 7.0e-104 381.3 294 70.1
DCAR_001732 Daucus carota HOM05D005661 ORTHO05D007997 1.2e-103 380.6 301 71.1
RcHm_v2.0_Chr7g0218881 Rosa chinensis HOM05D005661 ORTHO05D007997 1.2e-103 380.6 312 69.2
FAN08G1685 Fragaria x ananassa HOM05D005661 ORTHO05D007997 2.6e-103 379.4 302 70.5
BolC2t11148H Brassica oleracea HOM05D005661 ORTHO05D007997 4.5e-103 378.6 307 68.7
Sp2g13750 Schrenkiella parvula HOM05D005661 ORTHO05D007997 5.9e-103 378.3 310 67.7
BcaC03g17145 Brassica carinata HOM05D005661 ORTHO05D007997 1.0e-102 377.5 302 68.5
CANSAT01G0358 Cannabis sativa HOM05D005661 ORTHO05D007997 1.0e-102 377.5 301 70.1
FAN13G1518 Fragaria x ananassa HOM05D005661 ORTHO05D007997 1.3e-102 377.1 229 83.8
TWI23G0175 Tripterygium wilfordii HOM05D005661 ORTHO05D007997 1.3e-102 377.1 307 69.1
Thhalv10004647m.g Eutrema salsugineum HOM05D005661 ORTHO05D007997 2.2e-102 376.3 297 69.4
MD08G1249400 Malus domestica HOM05D005661 ORTHO05D007997 3.8e-102 375.6 226 84.5
AUR62042241 Chenopodium quinoa HOM05D005661 ORTHO05D007997 8.5e-102 374.4 306 67.0
VMungo1215G1111 Vigna mungo HOM05D005661 ORTHO05D007997 1.5e-101 373.6 256 74.2
ATR1089G013 Amborella trichopoda HOM05D005661 ORTHO05D007997 4.2e-101 372.1 236 80.1
Lj4g0018255 Lotus japonicus HOM05D005661 ORTHO05D007997 3.0e-99 365.9 246 76.8
COL.COLO4_31208 Corchorus olitorius HOM05D005661 ORTHO05D007997 5.7e-98 361.7 204 87.7
MBI06_g17067_MAGBIO Magnolia biondii HOM05D005661 ORTHO05D007997 7.5e-98 361.3 303 66.3
SEGI_39309 Sequoiadendron giganteum HOM05D005661 ORTHO05D007997 1.3e-97 360.5 284 67.6
HPP92_003715 Vanilla planifolia HOM05D005661 ORTHO05D007997 1.7e-97 360.1 260 69.6
HPP92_003721 Vanilla planifolia HOM05D005661 ORTHO05D007997 3.7e-97 359.0 254 70.5
Phvul.003G090900 Phaseolus vulgaris HOM05D005661 ORTHO05D007997 4.8e-97 358.6 248 73.4
AUR62032486 Chenopodium quinoa HOM05D005661 ORTHO05D007997 9.1e-96 354.4 301 66.1
Sabra01G0175500 Salix brachista HOM05D005661 ORTHO05D007997 9.1e-96 354.4 318 62.6
Lalb_Chr07g0176831 Lupinus albus HOM05D005661 ORTHO05D007997 1.6e-95 353.6 262 71.4
SGA_v2.0_scaffold131G34439 Striga asiatica HOM05D005661 ORTHO05D007997 3.5e-95 352.4 305 67.5
Zm00001eb365960 Zea mays HOM05D005661 ORTHO05D007997 5.9e-95 351.7 239 72.4
Dinv29650 Davidia involucrata HOM05D005661 ORTHO05D007997 8.5e-94 347.8 204 85.3
Zm00001eb145390 Zea mays HOM05D005661 ORTHO05D007997 1.9e-93 346.7 270 65.6
Haze_09964 Corylus avellana HOM05D005661 ORTHO05D007997 3.2e-93 345.9 254 73.2
arahy.Tifrunner.gnm1.ann1.PPAS6H Arachis hypogaea HOM05D005661 ORTHO05D007997 4.2e-93 345.5 244 74.2
Medtr4g134540 Medicago truncatula HOM05D005661 ORTHO05D007997 5.5e-93 345.1 287 65.9
Mapoly0006s0146 Marchantia polymorpha HOM05D005661 ORTHO05D007997 7.2e-93 344.7 271 67.2
EL10Ac6g13962 Beta vulgaris HOM05D005661 ORTHO05D007997 1.2e-92 344.0 292 66.1
ClCG10G007530 Citrullus lanatus HOM05D005661 ORTHO05D007997 8.8e-91 337.8 334 58.7
Pp3c15_1010 Physcomitrium patens HOM05D005661 ORTHO05D007997 2.0e-90 336.7 255 67.5
Pp3c9_590 Physcomitrium patens HOM05D005661 ORTHO05D007997 2.0e-90 336.7 252 69.0
Ah.02g128470 Amaranthus hybridus HOM05D005661 ORTHO05D007997 1.7e-89 333.6 265 67.9
arahy.Tifrunner.gnm1.ann1.FQN863 Arachis hypogaea HOM05D005661 ORTHO05D007997 1.2e-87 327.4 241 73.0
Cpa.g.sc173.2 Carica papaya HOM05D005661 ORTHO05D007997 2.2e-86 323.2 226 75.2
SMO367G1090 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 7.2e-85 318.2 225 70.2
Ca_13523_v3 Cicer arietinum L. HOM05D005661 ORTHO05D007997 1.2e-84 317.4 193 81.9
CDE02G0980 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 8.3e-81 304.7 288 59.4
Sed0000786 Sechium edule HOM05D005661 ORTHO05D007997 1.6e-79 300.4 259 65.6
vmacro01624 Vaccinium macrocarpon HOM05D005661 ORTHO05D007997 4.5e-79 298.9 308 61.7
CiPaw.06G177000 Carya illinoinensis HOM05D005661 ORTHO05D007997 4.3e-77 292.4 255 64.7
CDE04G2298 Ceratophyllum demersum HOM05D005661 ORTHO05D007997 4.7e-76 288.9 248 63.3
MCO15G500 Micromonas commoda HOM05D005661 ORTHO05D007997 1.7e-73 280.4 266 57.1
Lj5A292T55 Lonicera japonica HOM05D005661 ORTHO05D007997 3.2e-72 276.2 204 72.5
Os01g0887100 Oryza sativa ssp. japonica HOM05D005661 ORTHO05D007997 3.3e-69 266.2 172 75.6
Cre16.g679669 Chlamydomonas reinhardtii HOM05D005661 ORTHO05D007997 2.0e-66 256.9 307 47.9
Atru.chr6.139 Acer truncatum HOM05D005661 ORTHO05D007997 7.5e-66 255.0 161 80.1
Actinidia00142 Actinidia chinensis HOM05D005661 ORTHO05D007997 3.5e-63 246.1 204 67.6
Lj5A292T53 Lonicera japonica HOM05D005661 ORTHO05D007997 1.1e-53 214.5 168 67.9
CBR_g214 Chara braunii HOM05D005661 ORTHO05D007997 2.8e-52 209.9 177 57.6
Hund15335 Selenicereus undatus HOM05D005661 ORTHO05D007997 9.9e-42 174.9 162 59.9
HanXRQChr03g0069601 Helianthus annuus HOM05D005661 ORTHO05D007997 8.4e-41 171.8 104 78.8
AUR62030219 Chenopodium quinoa HOM05D005661 ORTHO05D007997 4.2e-40 169.5 168 58.9
AagrBONN_evm.TU.Sc2ySwM_362.430 Anthoceros agrestis HOM05D005661 ORTHO05D007997 2.1e-39 167.2 227 47.1
arahy.Tifrunner.gnm1.ann1.H0NKK3 Arachis hypogaea HOM05D005661 ORTHO05D007997 4.6e-39 166.0 130 69.2
Ca_21047_v3 Cicer arietinum L. HOM05D005661 ORTHO05D147477 6.2e-28 129.0 304 36.5
FvH4_5g27493 Fragaria vesca HOM05D005661 ORTHO05D007997 3.8e-25 119.8 265 40.0
VMungo1364G0001 Vigna mungo HOM05D005661 ORTHO05D005421 8.4e-25 118.6 149 49.0
FAN08G3692 Fragaria x ananassa HOM05D005661 ORTHO05D208506 1.1e-21 108.2 182 42.9
FAN08G1519 Fragaria x ananassa HOM05D005661 ORTHO05D210776 4.3e-21 106.3 114 57.0
SMO367G1054 Selaginella moellendorffii HOM05D005661 ORTHO05D007997 4.3e-21 106.3 144 47.9
AagrBONN_evm.TU.Sc2ySwM_362.419 Anthoceros agrestis HOM05D005661 ORTHO05D007997 1.6e-20 104.4 66 72.7
Haze_27119 Corylus avellana HOM05D005196 ORTHO05D006107 4.9e-17 92.8 229 29.7
HanXRQChr14g0444001 Helianthus annuus HOM05D005661 ORTHO05D007997 1.4e-16 91.3 62 69.4
CAN.G242.16 Capsicum annuum HOM05D005661 ORTHO05D007997 2.5e-16 90.5 56 75.0
Ca_29126_v3 Cicer arietinum L. HOM05D005661 ORTHO05D148461 3.2e-16 90.1 227 29.1
Lj5A292T54 Lonicera japonica HOM05D005661 ORTHO05D007997 5.1e-14 82.8 48 83.3
FvH4_5g27491 Fragaria vesca HOM05D005661 ORTHO05D046262 2.8e-12 77.0 104 52.9
FAN08G0833 Fragaria x ananassa HOM05D005661 ORTHO05D203111 1.9e-08 64.3 54 63.0


User provided reference genes

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