Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00699 Erythranthe guttata HOM05D007630 ORTHO05D009637 4.0e-139 498.0 247 100.0
MSTRG.16453 Avicennia marina HOM05D007630 ORTHO05D009637 4.8e-116 421.4 244 85.2
CAN.G1379.16 Capsicum annuum HOM05D007630 ORTHO05D009637 2.1e-111 406.0 241 81.7
CSS0024546 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 1.4e-110 403.3 248 80.6
Solyc01g102720.3 Solanum lycopersicum HOM05D007630 ORTHO05D009637 5.1e-110 401.4 241 80.9
Sopen01g045140 Solanum pennellii HOM05D007630 ORTHO05D009637 5.1e-110 401.4 241 81.3
Hma1.2p1_0157F.1_g069300 Hydrangea macrophylla HOM05D007630 ORTHO05D009637 8.8e-110 400.6 243 81.5
PGSC0003DMG400018220 Solanum tuberosum HOM05D007630 ORTHO05D009637 1.1e-109 400.2 241 80.9
Cc02_g23840 Coffea canephora HOM05D007630 ORTHO05D009637 1.5e-109 399.8 243 80.7
GSVIVG01023115001 Vitis vinifera HOM05D007630 ORTHO05D009637 1.3e-108 396.7 241 80.9
Actinidia11717 Actinidia chinensis HOM05D007630 ORTHO05D009637 6.3e-108 394.4 243 79.8
Nitab4.5_0006947g0030 Nicotiana tabacum HOM05D007630 ORTHO05D009637 8.2e-108 394.0 235 82.6
Ciclev10002337m.g Citrus clementina HOM05D007630 ORTHO05D009637 1.8e-107 392.9 239 81.6
Actinidia17707 Actinidia chinensis HOM05D007630 ORTHO05D009637 3.1e-107 392.1 243 80.2
QL02p103828 Quercus lobata HOM05D007630 ORTHO05D009637 3.1e-107 392.1 240 80.4
Nitab4.5_0001085g0080 Nicotiana tabacum HOM05D007630 ORTHO05D009637 4.1e-107 391.7 235 81.7
Lj9A243T50 Lonicera japonica HOM05D007630 ORTHO05D009637 5.3e-107 391.3 241 81.3
Peaxi162Scf00194g00929 Petunia axillaris HOM05D007630 ORTHO05D009637 5.3e-107 391.3 235 82.1
Manes.06G015300 Manihot esculenta HOM05D007630 ORTHO05D009637 7.0e-107 391.0 239 81.6
Rhsim11G0114600 Rhododendron simsii HOM05D007630 ORTHO05D009637 7.0e-107 391.0 243 80.2
Sabra01G0176100 Salix brachista HOM05D007630 ORTHO05D009637 7.0e-107 391.0 242 80.6
CSS0032395 Camellia sinensis var. sinensis HOM05D007630 ORTHO05D009637 9.1e-107 390.6 247 79.4
Nn5g27111 Nelumbo nucifera HOM05D007630 ORTHO05D009637 9.1e-107 390.6 242 79.8
Phvul.003G090300 Phaseolus vulgaris HOM05D007630 ORTHO05D009637 9.1e-107 390.6 241 79.7
Potri.004G231000 Populus trichocarpa HOM05D007630 ORTHO05D009637 9.1e-107 390.6 242 80.6
Glyma.07G270900 Glycine max HOM05D007630 ORTHO05D009637 4.5e-106 388.3 243 77.4
Glyma.17G003000 Glycine max HOM05D007630 ORTHO05D009637 2.2e-105 386.0 243 78.2
DCAR_001874 Daucus carota HOM05D007630 ORTHO05D009637 5.0e-105 384.8 239 79.5
Psat4g001800 Pisum sativum HOM05D007630 ORTHO05D009637 5.0e-105 384.8 241 78.8
vmacro01631 Vaccinium macrocarpon HOM05D007630 ORTHO05D009637 1.5e-104 383.3 236 80.9
Atru.chr6.70 Acer truncatum HOM05D007630 ORTHO05D009637 1.9e-104 382.9 237 81.0
Oeu000167.1 Olea europaea HOM05D007630 ORTHO05D009637 3.2e-104 382.1 233 80.7
Cpa.g.sc246.13 Carica papaya HOM05D007630 ORTHO05D009637 4.2e-104 381.7 248 77.4
TWI59G0438 Tripterygium wilfordii HOM05D007630 ORTHO05D009637 4.2e-104 381.7 242 78.5
TPR.G5932 Trifolium pratense HOM05D007630 ORTHO05D009637 1.2e-103 380.2 233 79.0
Lj4g0008184 Lotus japonicus HOM05D007630 ORTHO05D009637 1.6e-103 379.8 244 77.0
Medtr4g134400 Medicago truncatula HOM05D007630 ORTHO05D009637 6.1e-103 377.9 233 79.0
Prupe.1G587600 Prunus persica HOM05D007630 ORTHO05D009637 8.0e-103 377.5 246 76.4
RcHm_v2.0_Chr7g0218271 Rosa chinensis HOM05D007630 ORTHO05D009637 1.8e-102 376.3 242 77.3
arahy.Tifrunner.gnm1.ann1.CDQ02R Arachis hypogaea HOM05D007630 ORTHO05D009637 1.1e-101 373.6 244 76.6
arahy.Tifrunner.gnm1.ann1.XQ55VB Arachis hypogaea HOM05D007630 ORTHO05D009637 1.1e-101 373.6 244 76.6
Haze_09954 Corylus avellana HOM05D007630 ORTHO05D009637 2.0e-101 372.9 228 81.1
Hund29384 Selenicereus undatus HOM05D007630 ORTHO05D009637 9.7e-101 370.5 238 76.9
Hund29386 Selenicereus undatus HOM05D007630 ORTHO05D009637 9.7e-101 370.5 238 76.9
FvH4_5g27180 Fragaria vesca HOM05D007630 ORTHO05D009637 1.7e-100 369.8 242 76.0
ECA236G0298 Erigeron canadensis HOM05D007630 ORTHO05D009637 2.2e-100 369.4 243 79.4
HanXRQChr16g0531021 Helianthus annuus HOM05D007630 ORTHO05D009637 2.8e-100 369.0 240 76.7
Lalb_Chr07g0176861 Lupinus albus HOM05D007630 ORTHO05D009637 2.8e-100 369.0 235 77.9
COL.COLO4_31101 Corchorus olitorius HOM05D007630 ORTHO05D009637 4.8e-100 368.2 240 77.1
Thecc.06G066000 Theobroma cacao HOM05D007630 ORTHO05D009637 1.1e-99 367.1 237 77.6
FAN04G2951 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.8e-99 366.3 242 75.2
CANSAT01G1787 Cannabis sativa HOM05D007630 ORTHO05D009637 5.3e-99 364.8 233 78.5
FAN13G2616 Fragaria x ananassa HOM05D007630 ORTHO05D009637 1.6e-98 363.2 249 73.9
FAN18G2712 Fragaria x ananassa HOM05D007630 ORTHO05D009637 5.9e-98 361.3 246 74.4
AUR62040114 Chenopodium quinoa HOM05D007630 ORTHO05D009637 3.8e-97 358.6 232 77.6
PGR042G3439 Punica granatum HOM05D007630 ORTHO05D009637 1.1e-96 357.1 227 78.4
Aqoxy6G00011 Aquilegia oxysepala HOM05D007630 ORTHO05D009637 2.5e-96 355.9 242 74.8
THA.LOC104809043 Tarenaya hassleriana HOM05D007630 ORTHO05D009637 2.7e-95 352.4 238 72.3
MD08G1250400 Malus domestica HOM05D007630 ORTHO05D009637 4.7e-95 351.7 253 70.8
Duzib192G0579 Durio zibethinus HOM05D007630 ORTHO05D009637 6.1e-95 351.3 229 78.2
Eucgr.G00050 Eucalyptus grandis HOM05D007630 ORTHO05D009637 6.1e-95 351.3 235 77.0
SGA_v2.0_scaffold254G45223 Striga asiatica HOM05D007630 ORTHO05D009637 2.3e-94 349.4 246 72.8
Lsat_1_v5_gn_9_82660 Lactuca sativa HOM05D007630 ORTHO05D009637 1.3e-92 343.6 255 71.0
Gohir.A05G160300 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.3e-92 340.9 241 73.4
Gorai.009G168000 Gossypium raimondii HOM05D007630 ORTHO05D009637 8.3e-92 340.9 241 73.4
Sp6g11150 Schrenkiella parvula HOM05D007630 ORTHO05D009637 2.7e-90 335.9 240 71.2
VMungo1215G0090 Vigna mungo HOM05D007630 ORTHO05D009637 5.9e-90 334.7 210 79.0
Gorai.011G090500 Gossypium raimondii HOM05D007630 ORTHO05D009637 1.0e-89 334.0 242 69.4
AT5G49800 Arabidopsis thaliana HOM05D007630 ORTHO05D009637 2.2e-89 332.8 236 70.3
Gohir.A10G157500 Gossypium hirsutum HOM05D007630 ORTHO05D009637 2.2e-89 332.8 242 69.4
Aa31sc192G10 Aethionema arabicum HOM05D007630 ORTHO05D009637 3.8e-89 332.0 242 70.2
CDE05G1783 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 8.5e-89 330.9 238 67.6
CDE05G2797 Ceratophyllum demersum HOM05D007630 ORTHO05D009637 1.5e-88 330.1 237 67.9
CARHR258980 Cardamine hirsuta HOM05D007630 ORTHO05D009637 5.5e-88 328.2 242 67.4
AL8G23760 Arabidopsis lyrata HOM05D007630 ORTHO05D009637 1.4e-86 323.6 231 70.6
ATR1089G051 Amborella trichopoda HOM05D007630 ORTHO05D009637 6.8e-86 321.2 233 70.4
PSO017G5941 Papaver somniferum HOM05D007630 ORTHO05D009637 1.5e-85 320.1 245 69.0
PSO170G3600 Papaver somniferum HOM05D007630 ORTHO05D009637 1.5e-85 320.1 245 69.0
Carub.0008s0968 Capsella rubella HOM05D007630 ORTHO05D009637 2.0e-85 319.7 237 66.7
Oeu043594.1 Olea europaea HOM05D007630 ORTHO05D009637 3.4e-85 318.9 180 86.1
TAR629G1327 Trochodendron aralioides HOM05D007630 ORTHO05D009637 7.5e-85 317.8 205 77.1
AUR62032498 Chenopodium quinoa HOM05D007630 ORTHO05D009637 1.8e-83 313.2 205 76.6
DCAR_028500 Daucus carota HOM05D007630 ORTHO05D009637 2.1e-79 299.7 206 74.3
Gohir.D10G083200 Gossypium hirsutum HOM05D007630 ORTHO05D009637 4.7e-79 298.5 242 64.0
Os11g0245500 Oryza sativa ssp. japonica HOM05D007630 ORTHO05D009637 2.8e-71 272.7 251 58.6
SEGI_35985 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 1.2e-69 267.3 238 57.1
MBI06_g17062_MAGBIO Magnolia biondii HOM05D007630 ORTHO05D009637 7.8e-66 254.6 140 86.4
Cfa004415 Carpinus fangiana HOM05D000089 ORTHO05D000104 1.3e-65 253.8 228 61.0
Mapoly0105s0042 Marchantia polymorpha HOM05D007630 ORTHO05D009637 2.9e-60 236.1 220 50.9
Dinv30982 Davidia involucrata HOM05D007630 ORTHO05D009637 1.6e-58 230.3 146 80.8
Sc03g0005590 Simmondsia chinensis HOM05D007630 ORTHO05D009637 9.5e-56 221.1 154 72.1
SMO198G0095 Selaginella moellendorffii HOM05D007630 ORTHO05D009637 2.8e-55 219.5 222 51.4
Gohir.D05G163000 Gossypium hirsutum HOM05D007630 ORTHO05D009637 8.9e-54 214.5 167 67.7
Zm00001eb168190 Zea mays HOM05D007630 ORTHO05D009637 2.3e-49 199.9 244 47.1
MD15G1445600 Malus domestica HOM05D007630 ORTHO05D009637 2.6e-29 133.3 82 76.8
SEGI_15718 Sequoiadendron giganteum HOM05D007630 ORTHO05D009637 8.7e-25 118.2 224 32.6
Dinv29656 Davidia involucrata HOM05D007630 ORTHO05D009637 3.5e-18 96.3 130 47.7
HanXRQChr09g0245071 Helianthus annuus HOM05D000066 ORTHO05D000055 2.5e-11 73.6 57 64.9


User provided reference genes

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