Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00662 Erythranthe guttata HOM05D003578 ORTHO05D004021 5.5e-296 1020.4 579 100.0
MSTRG.16537 Avicennia marina HOM05D003578 ORTHO05D004021 5.4e-251 870.9 576 80.6
SGA_v2.0_scaffold1G00330 Striga asiatica HOM05D003578 ORTHO05D004021 7.1e-227 790.8 568 74.5
SGA_v2.0_scaffold110G31277 Striga asiatica HOM05D003578 ORTHO05D004021 2.5e-216 755.7 585 72.1
Oeu000197.1 Olea europaea HOM05D003578 ORTHO05D004021 3.0e-201 705.7 576 65.1
unitig_8.g4524 Utricularia gibba HOM05D003578 ORTHO05D004021 6.5e-188 661.4 573 63.0
Cc02_g22230 Coffea canephora HOM05D003578 ORTHO05D004021 2.0e-157 560.1 573 53.1
Dinv19347 Davidia involucrata HOM05D003578 ORTHO05D004021 6.1e-154 548.5 577 51.1
Oeu026056.1 Olea europaea HOM05D003578 ORTHO05D004021 1.0e-153 547.7 466 63.9
CSS0023378 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 3.0e-153 546.2 569 53.1
Actinidia39059 Actinidia chinensis HOM05D003578 ORTHO05D004021 3.1e-150 536.2 570 50.9
CSS0005813 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 9.1e-150 534.6 570 53.5
Rhsim11G0132000 Rhododendron simsii HOM05D003578 ORTHO05D004021 1.3e-148 530.8 588 50.7
Nitab4.5_0003071g0040 Nicotiana tabacum HOM05D003578 ORTHO05D004021 2.2e-148 530.0 580 53.6
Nitab4.5_0009907g0020 Nicotiana tabacum HOM05D003578 ORTHO05D004021 3.2e-147 526.2 580 54.8
Peaxi162Scf00011g01125 Petunia axillaris HOM05D003578 ORTHO05D004021 2.3e-145 520.0 580 55.3
Prupe.1G564000 Prunus persica HOM05D003578 ORTHO05D004021 2.9e-135 486.5 566 48.8
CiPaw.06G150300 Carya illinoinensis HOM05D003578 ORTHO05D004021 2.4e-134 483.4 584 48.1
TWI23G0776 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 2.4e-134 483.4 561 50.8
Cfa005568 Carpinus fangiana HOM05D003578 ORTHO05D004021 2.0e-133 480.3 544 48.0
MD15G1419200 Malus domestica HOM05D003578 ORTHO05D004021 1.3e-132 477.6 571 47.5
DCAR_029239 Daucus carota HOM05D003578 ORTHO05D004021 8.6e-132 474.9 573 49.9
TWI14G0091 Tripterygium wilfordii HOM05D003578 ORTHO05D004021 2.3e-129 466.8 559 50.1
GSVIVG01023023001 Vitis vinifera HOM05D003578 ORTHO05D004021 5.2e-129 465.7 570 47.5
Potri.001G208700 Populus trichocarpa HOM05D003578 ORTHO05D004021 1.5e-128 464.2 571 48.7
Solyc01g104570.4 Solanum lycopersicum HOM05D003578 ORTHO05D004021 1.3e-127 461.1 582 47.3
Sopen01g047080 Solanum pennellii HOM05D003578 ORTHO05D004021 6.4e-127 458.8 582 46.7
Haze_10786 Corylus avellana HOM05D003578 ORTHO05D004021 2.0e-125 453.8 580 44.3
Atru.chr6.1000 Acer truncatum HOM05D003578 ORTHO05D004021 2.3e-124 450.3 578 45.0
PGSC0003DMG400029761 Solanum tuberosum HOM05D003578 ORTHO05D004021 2.3e-124 450.3 582 46.6
Duzib132G0407 Durio zibethinus HOM05D003578 ORTHO05D004021 6.6e-124 448.7 541 44.2
vmacro01788 Vaccinium macrocarpon HOM05D003578 ORTHO05D004021 6.6e-124 448.7 581 45.8
MBI06_g22317_MAGBIO Magnolia biondii HOM05D003578 ORTHO05D004021 1.5e-123 447.6 535 46.5
Sc20g0004020 Simmondsia chinensis HOM05D003578 ORTHO05D004021 1.5e-123 447.6 564 45.2
PSO478G2549 Papaver somniferum HOM05D003578 ORTHO05D004021 3.3e-123 446.4 548 45.6
Glyma.15G048000 Glycine max HOM05D003578 ORTHO05D004021 4.3e-123 446.0 570 45.3
FAN18G4487 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.1e-122 443.7 561 45.5
CSS0048877 Camellia sinensis var. sinensis HOM05D003578 ORTHO05D004021 4.7e-122 442.6 592 48.3
FvH4_5g35831 Fragaria vesca HOM05D003578 ORTHO05D004021 6.2e-122 442.2 561 45.5
Eucgr.G00633 Eucalyptus grandis HOM05D003578 ORTHO05D004021 1.8e-121 440.7 574 41.8
FAN13G2947 Fragaria x ananassa HOM05D003578 ORTHO05D004021 2.3e-121 440.3 570 45.4
Hund15694 Selenicereus undatus HOM05D003578 ORTHO05D004021 3.1e-121 439.9 573 44.9
Nn1g08568 Nelumbo nucifera HOM05D003578 ORTHO05D004021 5.2e-121 439.1 460 55.4
Ciclev10007743m.g Citrus clementina HOM05D003578 ORTHO05D004021 2.0e-120 437.2 582 44.7
PSO017G3053 Papaver somniferum HOM05D003578 ORTHO05D004021 3.4e-120 436.4 518 46.3
FAN08G2591 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.4e-120 436.0 561 44.7
Lj6g0021493 Lotus japonicus HOM05D003578 ORTHO05D004021 9.8e-120 434.9 575 43.8
VMungo0540G1591 Vigna mungo HOM05D003578 ORTHO05D004021 1.3e-119 434.5 565 44.1
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.1e-118 431.4 570 45.3
Gohir.A01G176500 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.4e-118 431.0 539 43.6
Gohir.A03G210700 Gossypium hirsutum HOM05D003578 ORTHO05D004021 5.4e-118 429.1 539 43.0
Gorai.002G207800 Gossypium raimondii HOM05D003578 ORTHO05D004021 2.7e-117 426.8 543 43.1
CANSAT11G1197 Cannabis sativa HOM05D003578 ORTHO05D004021 3.5e-117 426.4 574 41.8
Lsat_1_v5_gn_9_116440 Lactuca sativa HOM05D003578 ORTHO05D004021 1.0e-116 424.9 576 45.7
Lj1g0024840 Lotus japonicus HOM05D003578 ORTHO05D004021 1.3e-116 424.5 580 42.6
Thecc.02G041600 Theobroma cacao HOM05D003578 ORTHO05D004021 1.7e-116 424.1 556 42.8
Ca_00092_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 5.1e-116 422.5 572 43.4
Ca_29931_v3 Cicer arietinum L. HOM05D003578 ORTHO05D004021 5.1e-116 422.5 572 43.4
HanXRQChr03g0066191 Helianthus annuus HOM05D003578 ORTHO05D004021 1.1e-115 421.4 561 46.5
Phvul.006G211900 Phaseolus vulgaris HOM05D003578 ORTHO05D004021 3.3e-115 419.9 570 42.1
THA.LOC104824162 Tarenaya hassleriana HOM05D003578 ORTHO05D004021 7.3e-115 418.7 534 42.3
ECA238G3381 Erigeron canadensis HOM05D003578 ORTHO05D004021 1.2e-114 417.9 578 43.1
CAN.G1352.14 Capsicum annuum HOM05D003578 ORTHO05D004021 2.8e-114 416.8 501 47.3
ClCG05G009820 Citrullus lanatus HOM05D003578 ORTHO05D004021 3.6e-114 416.4 588 42.3
RcHm_v2.0_Chr5g0046031 Rosa chinensis HOM05D003578 ORTHO05D004021 3.6e-114 416.4 575 45.7
Cpa.g.sc2.28 Carica papaya HOM05D003578 ORTHO05D004021 4.7e-114 416.0 577 43.8
PGR042G1741 Punica granatum HOM05D003578 ORTHO05D004021 8.1e-114 415.2 569 42.2
MELO3C006920.2 Cucumis melo HOM05D003578 ORTHO05D004021 1.1e-113 414.8 582 42.6
FAN04G0507 Fragaria x ananassa HOM05D003578 ORTHO05D004021 4.0e-113 412.9 560 45.2
Sabra01G0161000 Salix brachista HOM05D003578 ORTHO05D004021 4.0e-113 412.9 638 40.1
Aa31LG8G7140 Aethionema arabicum HOM05D003578 ORTHO05D004021 6.8e-113 412.1 570 42.5
CsaV3_3G018800 Cucumis sativus L. HOM05D003578 ORTHO05D004021 8.9e-113 411.8 582 42.3
PSO266G0076 Papaver somniferum HOM05D003578 ORTHO05D004021 1.3e-111 407.9 549 43.5
MD08G1226900 Malus domestica HOM05D003578 ORTHO05D004021 2.9e-111 406.8 470 48.9
Medtr2g028550 Medicago truncatula HOM05D003578 ORTHO05D004021 3.7e-111 406.4 559 42.2
PSO478G5278 Papaver somniferum HOM05D003578 ORTHO05D004021 8.4e-111 405.2 549 43.4
Sed0026866 Sechium edule HOM05D003578 ORTHO05D004021 1.1e-110 404.8 584 41.4
arahy.Tifrunner.gnm1.ann1.0E6AR9 Arachis hypogaea HOM05D003578 ORTHO05D004021 1.4e-110 404.4 579 40.6
CDE10G0634 Ceratophyllum demersum HOM05D003578 ORTHO05D004021 3.2e-110 403.3 534 44.4
SHI16565 Sapria himalayana HOM05D003578 ORTHO05D004021 3.5e-109 399.8 531 40.5
TPR.G17513 Trifolium pratense HOM05D003578 ORTHO05D004021 6.0e-109 399.1 563 40.5
arahy.Tifrunner.gnm1.ann1.H2X3VG Arachis hypogaea HOM05D003578 ORTHO05D004021 1.0e-108 398.3 542 40.8
Manes.07G012900 Manihot esculenta HOM05D003578 ORTHO05D004021 3.0e-108 396.7 461 52.1
HanXRQChr03g0066541 Helianthus annuus HOM05D003578 ORTHO05D004021 3.9e-108 396.4 555 44.1
Aqoxy7G03367 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 5.1e-108 396.0 571 40.6
arahy.Tifrunner.gnm1.ann1.FVSM65 Arachis hypogaea HOM05D003578 ORTHO05D004021 8.6e-108 395.2 563 39.8
Aa31LG2G6060 Aethionema arabicum HOM05D003578 ORTHO05D004021 7.3e-107 392.1 572 40.4
AUR62033619 Chenopodium quinoa HOM05D003578 ORTHO05D004021 1.2e-106 391.3 566 42.0
QL11p018835 Quercus lobata HOM05D003578 ORTHO05D004021 1.2e-106 391.3 579 41.6
BolC8t50589H Brassica oleracea HOM05D003578 ORTHO05D004021 1.8e-105 387.5 556 43.7
C08p29780 Brassica napus HOM05D003578 ORTHO05D004021 5.2e-105 386.0 556 43.7
Thhalv10010243m.g Eutrema salsugineum HOM05D003578 ORTHO05D004021 6.8e-105 385.6 536 44.6
AUR62038607 Chenopodium quinoa HOM05D003578 ORTHO05D004021 1.5e-104 384.4 567 41.3
BcaC07g39801 Brassica carinata HOM05D003578 ORTHO05D004021 2.6e-104 383.6 556 43.9
Gohir.D02G232300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 3.4e-104 383.3 539 40.3
Gorai.005G260100 Gossypium raimondii HOM05D003578 ORTHO05D004021 3.4e-104 383.3 539 40.1
Lalb_Chr20g0123381 Lupinus albus HOM05D003578 ORTHO05D004021 8.4e-103 378.6 570 40.9
Sp5g07820 Schrenkiella parvula HOM05D003578 ORTHO05D004021 4.2e-102 376.3 548 45.4
Lj1C1063G12 Lonicera japonica HOM05D003578 ORTHO05D004021 5.4e-102 375.9 384 55.2
A09p47580 Brassica napus HOM05D003578 ORTHO05D004021 1.6e-101 374.4 574 42.3
BraA09t40214Z Brassica rapa HOM05D003578 ORTHO05D004021 1.3e-100 371.3 574 42.2
CARHR164540 Cardamine hirsuta HOM05D003578 ORTHO05D004021 1.3e-100 371.3 537 39.5
arahy.Tifrunner.gnm1.ann1.CJK4SJ Arachis hypogaea HOM05D003578 ORTHO05D004021 3.0e-100 370.2 574 38.0
Aqoxy2G04052 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 1.5e-99 367.9 562 40.6
BcaB01g00173 Brassica carinata HOM05D003578 ORTHO05D004021 1.9e-99 367.5 575 39.8
Carub.0005s2123 Capsella rubella HOM05D003578 ORTHO05D004021 3.3e-99 366.7 533 38.3
COL.COLO4_33122 Corchorus olitorius HOM05D003578 ORTHO05D004021 2.4e-97 360.5 555 40.0
AL5G35710 Arabidopsis lyrata HOM05D003578 ORTHO05D004021 7.6e-96 355.5 534 39.1
AT3G54630 Arabidopsis thaliana HOM05D003578 ORTHO05D004021 1.7e-95 354.4 533 40.9
BolC6t37412H Brassica oleracea HOM05D003578 ORTHO05D004021 4.9e-95 352.8 535 39.8
EL10Ac2g02673 Beta vulgaris HOM05D003578 ORTHO05D004021 6.4e-95 352.4 567 40.6
Ah.10g033260 Amaranthus hybridus HOM05D003578 ORTHO05D004021 1.6e-93 347.8 554 40.4
Lsat_1_v5_gn_9_118160 Lactuca sativa HOM05D003578 ORTHO05D004021 3.0e-92 343.6 571 39.4
Eucgr.G00629 Eucalyptus grandis HOM05D003578 ORTHO05D004021 4.8e-90 336.3 425 45.2
BcaC08g44691 Brassica carinata HOM05D003578 ORTHO05D004021 3.1e-89 333.6 535 36.6
Psat1g170680 Pisum sativum HOM05D003578 ORTHO05D004021 9.0e-89 332.0 481 41.4
BcaB02g07728 Brassica carinata HOM05D003578 ORTHO05D004021 2.6e-88 330.5 570 35.6
arahy.Tifrunner.gnm1.ann1.MNPV6T Arachis hypogaea HOM05D003578 ORTHO05D004021 4.5e-88 329.7 426 42.3
Nn1g08571 Nelumbo nucifera HOM05D003578 ORTHO05D004021 8.4e-87 325.5 365 50.4
arahy.Tifrunner.gnm1.ann1.V2489D Arachis hypogaea HOM05D003578 ORTHO05D004021 1.9e-86 324.3 558 35.8
Gohir.D01G167300 Gossypium hirsutum HOM05D003578 ORTHO05D004021 1.9e-86 324.3 389 44.7
Psat1g170240 Pisum sativum HOM05D003578 ORTHO05D004021 1.2e-85 321.6 480 42.1
C06p22270 Brassica napus HOM05D003578 ORTHO05D004021 6.9e-73 279.3 535 33.1
HPP92_025499 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.7e-71 274.6 568 35.7
TAR374G1024 Trochodendron aralioides HOM05D003578 ORTHO05D004021 1.9e-70 271.2 261 53.3
Os08g0468400 Oryza sativa ssp. japonica HOM05D003578 ORTHO05D004021 1.5e-67 261.5 568 32.7
SEGI_09452 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 2.8e-66 257.3 387 37.7
ATR0193G049 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.7e-63 248.1 460 37.0
CiPaw.05G040700 Carya illinoinensis HOM05D003578 ORTHO05D004021 5.0e-63 246.5 254 48.8
Zm00001eb040130 Zea mays HOM05D003578 ORTHO05D004021 6.5e-55 219.5 401 35.9
CsaV3_3G021940 Cucumis sativus L. HOM05D003578 ORTHO05D004021 5.7e-51 206.5 245 43.7
SEGI_11795 Sequoiadendron giganteum HOM05D003578 ORTHO05D004021 2.4e-49 201.1 316 38.6
Aqoxy2G02351 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 2.1e-45 188.0 321 35.5
CiPaw.05G040600 Carya illinoinensis HOM05D003578 ORTHO05D004021 1.4e-44 185.3 255 46.7
GSVIVG01023069001 Vitis vinifera HOM05D003578 ORTHO05D004021 3.5e-40 170.6 256 41.4
HPP92_025538 Vanilla planifolia HOM05D003578 ORTHO05D004021 1.2e-37 162.2 240 35.8
Mapoly0042s0088 Marchantia polymorpha HOM05D003578 ORTHO05D004021 1.5e-35 155.2 501 26.3
SMO254G0006 Selaginella moellendorffii HOM05D003578 ORTHO05D004021 5.7e-35 153.3 484 25.2
Actinidia00223 Actinidia chinensis HOM05D003578 ORTHO05D004021 5.4e-33 146.7 402 29.9
A07p22210 Brassica napus HOM05D003578 ORTHO05D004021 5.9e-32 143.3 162 41.4
Nn1g00799 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.7e-31 141.7 216 44.4
Cre02.g098300 Chlamydomonas reinhardtii HOM05D003578 ORTHO05D004021 1.5e-30 138.7 565 23.9
Lsat_1_v5_gn_4_72880 Lactuca sativa HOM05D003578 ORTHO05D004021 1.9e-30 138.3 154 46.1
Pp3c7_8870 Physcomitrium patens HOM05D003578 ORTHO05D004021 9.5e-30 136.0 452 27.4
ATR0686G046 Amborella trichopoda HOM05D003578 ORTHO05D004021 1.6e-29 135.2 143 45.5
Aqoxy2G02352 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 4.7e-29 133.7 144 48.6
PRCOL_00003819 Prasinoderma coloniale HOM05D003578 ORTHO05D004021 5.2e-28 130.2 477 24.9
Nn7g38101 Nelumbo nucifera HOM05D003578 ORTHO05D004021 2.2e-26 124.8 164 42.7
HPP92_026283 Vanilla planifolia HOM05D003578 ORTHO05D004021 4.5e-24 117.1 172 39.0
Lj1A1063T36 Lonicera japonica HOM05D003578 ORTHO05D004021 5.9e-24 116.7 157 39.5
CAN.G1352.18 Capsicum annuum HOM05D003578 ORTHO05D004021 1.3e-23 115.5 159 52.2
GSVIVG01023046001 Vitis vinifera HOM05D003578 ORTHO05D004021 6.6e-23 113.2 146 42.5
GSVIVG01023034001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.1e-22 112.5 146 41.8
CsaV3_6G032180 Cucumis sativus L. HOM05D003578 ORTHO05D004021 1.5e-22 112.1 105 53.3
PGSC0003DMG400023774 Solanum tuberosum HOM05D003578 ORTHO05D004021 5.6e-22 110.2 123 49.6
Zm00001eb317570 Zea mays HOM05D003578 ORTHO05D004021 9.5e-22 109.4 134 42.5
Nn1g00803 Nelumbo nucifera HOM05D003578 ORTHO05D004021 6.1e-21 106.7 108 48.1
Zm00001eb226250 Zea mays HOM05D003578 ORTHO05D004021 2.3e-20 104.8 124 41.1
arahy.Tifrunner.gnm1.ann1.3K20HM Arachis hypogaea HOM05D003578 ORTHO05D004021 8.9e-20 102.8 162 34.6
arahy.Tifrunner.gnm1.ann1.0Y2WZB Arachis hypogaea HOM05D003578 ORTHO05D004021 5.4e-17 93.6 140 36.4
CBR_g55876 Chara braunii HOM05D003578 ORTHO05D004021 7.8e-16 89.7 496 22.2
Solyc01g104520.3 Solanum lycopersicum HOM05D003578 ORTHO05D004021 1.7e-15 88.6 128 43.0
Nn7g38100 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.6e-13 82.0 120 46.7
Lsat_1_v5_gn_3_132221 Lactuca sativa HOM05D003523 ORTHO05D004493 4.7e-13 80.5 73 56.2
Lsat_1_v5_gn_4_97940 Lactuca sativa HOM05D003523 ORTHO05D004021 4.7e-13 80.5 78 53.8
Zm00001eb322170 Zea mays HOM05D003578 ORTHO05D004021 2.0e-11 75.1 84 39.3
COL.COLO4_34280 Corchorus olitorius HOM05D003578 ORTHO05D004021 4.4e-11 73.9 95 47.4
MCO01G050 Micromonas commoda HOM05D003578 ORTHO05D004021 9.8e-11 72.8 226 23.9
Nn1g08562 Nelumbo nucifera HOM05D003578 ORTHO05D004021 1.7e-10 72.0 118 33.1
Aqoxy2G04053 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 6.4e-10 70.1 65 56.9
Aqoxy7G03366 Aquilegia oxysepala HOM05D003578 ORTHO05D004021 6.4e-10 70.1 65 56.9
arahy.Tifrunner.gnm1.ann1.ZN95YA Arachis hypogaea HOM05D003578 ORTHO05D004021 2.4e-09 68.2 71 43.7
Pp3c11_11580 Physcomitrium patens HOM05D003578 ORTHO05D004021 4.1e-09 67.4 419 22.7
GSVIVG01023076001 Vitis vinifera HOM05D003578 ORTHO05D004021 2.3e-07 61.6 99 33.3
Sopen01g047030 Solanum pennellii HOM05D003578 ORTHO05D004021 6.6e-07 60.1 55 54.5


User provided reference genes

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