Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00639 Erythranthe guttata HOM05D007421 ORTHO05D009203 7.4e-39 163.3 78 100.0
Oeu000232.1 Olea europaea HOM05D007421 ORTHO05D009203 9.5e-10 66.6 77 51.9
CSS0030012 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 2.1e-09 65.5 78 50.0
CSS0048527 Camellia sinensis var. sinensis HOM05D007421 ORTHO05D009203 2.1e-09 65.5 78 50.0
Nn5g28883 Nelumbo nucifera HOM05D007421 ORTHO05D009203 1.4e-08 62.8 67 50.7
Cc02_g21850 Coffea canephora HOM05D007421 ORTHO05D009203 1.8e-08 62.4 53 56.6
DCAR_029217 Daucus carota HOM05D007421 ORTHO05D009203 4.0e-08 61.2 54 50.0
DCAR_001801 Daucus carota HOM05D007421 ORTHO05D009203 6.8e-08 60.5 54 53.7
Dinv24220 Davidia involucrata HOM05D007421 ORTHO05D009203 6.8e-08 60.5 80 46.2
COL.COLO4_20870 Corchorus olitorius HOM05D007321 ORTHO05D009244 8.9e-08 60.1 78 47.4
Actinidia00249 Actinidia chinensis HOM05D007421 ORTHO05D009203 2.0e-07 58.9 55 52.7
GSVIVG01022264001 Vitis vinifera HOM05D007421 ORTHO05D009203 2.0e-07 58.9 81 46.9
FAN18G4438 Fragaria x ananassa HOM05D007421 ORTHO05D009203 4.4e-07 57.8 52 51.9
SGA_v2.0_scaffold332G48944 Striga asiatica HOM05D007421 ORTHO05D009203 4.4e-07 57.8 70 50.0
FAN04G0435 Fragaria x ananassa HOM05D007421 ORTHO05D009203 5.8e-07 57.4 52 51.9
vmacro01809 Vaccinium macrocarpon HOM05D007421 ORTHO05D009203 5.8e-07 57.4 55 54.5
Hma1.2p1_0012F.1_g007610 Hydrangea macrophylla HOM05D007421 ORTHO05D009203 7.5e-07 57.0 55 58.2
Sc08g0004770 Simmondsia chinensis HOM05D007421 ORTHO05D009203 7.5e-07 57.0 53 49.1
RcHm_v2.0_Chr7g0225501 Rosa chinensis HOM05D007421 ORTHO05D009203 9.8e-07 56.6 70 44.3
Thecc.02G143500 Theobroma cacao HOM05D007421 ORTHO05D009203 1.3e-06 56.2 51 54.9
Haze_10776 Corylus avellana HOM05D007421 ORTHO05D009203 2.2e-06 55.5 51 51.0
FvH4_5g30620 Fragaria vesca HOM05D007421 ORTHO05D009203 2.2e-06 55.5 52 50.0
CAN.G1034.36 Capsicum annuum HOM05D007421 ORTHO05D009203 2.9e-06 55.1 72 45.8
Sabra05G0133500 Salix brachista HOM05D007421 ORTHO05D009203 3.7e-06 54.7 78 39.7
Actinidia38971 Actinidia chinensis HOM05D003963 ORTHO05D004558 6.4e-06 53.9 72 41.7
CiPaw.06G151100 Carya illinoinensis HOM05D007421 ORTHO05D009203 8.3e-06 53.5 61 45.9
Prupe.1G559900 Prunus persica HOM05D007421 ORTHO05D009203 8.3e-06 53.5 53 49.1


User provided reference genes

Program Settings