Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 5.3e-218 760.8 394 100.0
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 9.3e-146 520.8 398 68.3
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 3.5e-137 492.3 418 64.1
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 1.3e-134 483.8 376 67.6
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 3.7e-134 482.3 332 72.6
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 4.6e-129 465.3 309 73.8
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 1.6e-126 456.8 315 71.4
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 2.2e-126 456.4 401 60.6
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 2.2e-126 456.4 322 70.5
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 8.2e-126 454.5 322 69.6
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 1.8e-125 453.4 329 69.3
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 5.9e-124 448.4 320 68.4
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 8.5e-123 444.5 386 62.2
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 1.1e-122 444.1 314 70.4
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 3.2e-122 442.6 341 65.7
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 5.5e-122 441.8 315 69.5
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 9.3e-122 441.0 388 60.3
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 1.2e-121 440.7 369 62.1
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 1.6e-121 440.3 315 68.9
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 2.1e-121 439.9 398 58.3
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 4.6e-121 438.7 387 59.9
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 7.9e-121 438.0 339 67.6
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 1.8e-120 436.8 323 67.8
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.9e-120 435.6 338 63.6
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 1.9e-119 433.3 388 59.0
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 5.7e-119 431.8 375 60.3
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 7.4e-119 431.4 359 59.9
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 2.8e-118 429.5 310 69.7
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 3.7e-118 429.1 403 55.1
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 6.3e-118 428.3 331 65.6
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 6.3e-118 428.3 360 61.1
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 6.3e-118 428.3 394 58.9
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 3.1e-117 426.0 406 56.4
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 3.1e-117 426.0 391 57.5
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 4.1e-117 425.6 384 59.1
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 6.9e-117 424.9 387 57.9
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 2.0e-116 423.3 311 67.8
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 5.9e-116 421.8 366 60.7
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 5.9e-116 421.8 403 57.6
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 5.9e-116 421.8 307 69.1
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 1.0e-115 421.0 362 59.9
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 1.3e-115 420.6 314 66.9
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 2.2e-115 419.9 395 58.0
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 2.9e-115 419.5 349 60.7
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 5.0e-115 418.7 319 65.5
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 6.5e-115 418.3 318 67.6
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 8.5e-115 417.9 346 61.6
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 1.9e-114 416.8 310 68.4
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 3.2e-114 416.0 394 57.9
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 7.2e-114 414.8 323 64.1
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 7.2e-114 414.8 347 60.2
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 7.2e-114 414.8 320 65.3
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.2e-113 414.1 310 65.2
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 1.6e-113 413.7 389 57.3
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 2.7e-113 412.9 346 62.1
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 3.6e-113 412.5 310 66.8
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 6.1e-113 411.8 315 65.4
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 2.3e-112 409.8 390 58.2
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 3.0e-112 409.5 317 63.4
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 3.0e-112 409.5 348 61.5
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 3.9e-112 409.1 402 54.0
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 1.1e-111 407.5 350 60.0
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 1.5e-111 407.1 324 64.2
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 3.3e-111 406.0 310 63.9
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 3.3e-111 406.0 341 61.9
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 4.4e-111 405.6 376 56.9
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 5.7e-111 405.2 326 61.7
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 4.8e-110 402.1 345 60.0
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 1.4e-109 400.6 345 60.0
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 1.2e-108 397.5 377 57.8
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 2.6e-108 396.4 310 62.3
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 1.0e-107 394.4 321 63.2
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 1.3e-107 394.0 374 55.9
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 3.8e-107 392.5 280 70.7
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 8.5e-107 391.3 306 64.7
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 8.5e-107 391.3 306 64.7
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 8.5e-107 391.3 273 71.4
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 1.9e-106 390.2 379 56.7
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 5.5e-106 388.7 383 55.4
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 1.0e-104 384.4 377 56.0
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 1.4e-104 384.0 338 59.8
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 3.9e-104 382.5 280 67.9
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 2.0e-103 380.2 304 62.8
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 2.6e-103 379.8 344 59.6
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 9.7e-103 377.9 318 61.6
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 2.2e-102 376.7 353 57.8
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 1.1e-101 374.4 314 62.4
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 1.4e-101 374.0 314 62.1
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 4.1e-101 372.5 315 61.0
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 8.5e-99 364.8 301 63.1
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 8.0e-97 358.2 279 64.2
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 1.5e-95 354.0 369 52.6
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 4.5e-92 342.4 337 53.1
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 1.1e-90 337.8 327 54.7
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 4.7e-89 332.4 318 56.0
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 6.1e-89 332.0 281 61.2
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 6.8e-88 328.6 310 56.1
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 3.4e-87 326.2 359 49.6
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 4.8e-86 322.4 253 64.0
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 8.0e-81 305.1 217 68.2
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 2.2e-78 297.0 283 54.8
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 7.3e-74 282.0 228 64.9
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 2.1e-73 280.4 226 68.1
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.0e-72 278.1 196 69.4
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 6.4e-70 268.9 330 47.3
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 5.4e-69 265.8 368 43.5
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 2.3e-67 260.4 212 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.1e-66 258.1 315 46.3
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 4.7e-65 252.7 285 51.9
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 1.6e-60 237.7 324 42.6
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 8.6e-59 231.9 301 45.5
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 5.4e-53 212.6 173 61.3
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 9.5e-50 201.8 349 39.5
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 8.4e-46 188.7 277 44.0
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 4.4e-39 166.4 130 60.8
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 8.7e-27 125.6 103 60.2
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 8.7e-27 125.6 103 60.2
ATR0782G112 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.4e-24 117.5 97 57.7
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.5e-23 114.8 105 58.1
CARHR052370 Cardamine hirsuta HOM05D006342 ORTHO05D008155 4.5e-23 113.2 90 61.1
arahy.Tifrunner.gnm1.ann1.6J847D Arachis hypogaea HOM05D006342 ORTHO05D008155 4.9e-22 109.8 97 58.8
arahy.Tifrunner.gnm1.ann1.RT43SE Arachis hypogaea HOM05D006342 ORTHO05D008155 4.9e-22 109.8 97 58.8
arahy.Tifrunner.gnm1.ann1.2FS2S8 Arachis hypogaea HOM05D006342 ORTHO05D008155 4.2e-21 106.7 97 56.7
CSS0034348 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 2.2e-14 84.3 95 51.6
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 1.8e-11 74.7 51 62.7
arahy.Tifrunner.gnm1.ann1.P2KY5D Arachis hypogaea HOM05D006342 ORTHO05D008155 3.3e-10 70.5 64 56.2


User provided reference genes

Program Settings