Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 0.0e+00 1315.8 851 100.0
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 4.6e-142 509.6 922 44.1
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 1.2e-113 415.2 917 40.8
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 3.5e-113 413.7 917 40.8
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 3.6e-102 377.1 894 40.2
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 3.8e-96 357.1 946 37.2
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 7.5e-92 342.8 899 36.3
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 1.8e-90 338.2 938 35.5
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 2.4e-90 337.8 910 38.9
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 3.0e-85 320.9 889 35.5
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 8.3e-83 312.8 891 38.6
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 2.4e-82 311.2 885 37.5
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 3.5e-81 307.4 891 39.3
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 1.8e-77 295.0 919 37.3
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 1.8e-77 295.0 912 35.6
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 6.4e-75 286.6 923 40.1
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 3.0e-72 277.7 933 37.5
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 5.0e-72 276.9 929 38.3
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 3.4e-68 264.2 927 36.8
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 4.6e-65 253.8 946 34.8
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 2.5e-63 248.1 933 33.2
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 1.2e-62 245.7 895 32.2
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 1.6e-62 245.4 895 32.3
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 3.1e-61 241.1 952 31.8
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 2.4e-58 231.5 937 36.0
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 2.4e-58 231.5 928 33.1
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 5.4e-58 230.3 971 31.4
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 2.1e-57 228.4 942 29.8
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 2.7e-57 228.0 956 32.5
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 3.5e-57 227.6 957 35.6
unitig_744.g24202 Utricularia gibba HOM05D004628 ORTHO05D005166 5.1e-56 223.8 467 38.8
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 1.1e-55 222.6 1036 34.7
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 1.1e-53 216.1 914 32.4
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 2.4e-53 214.9 945 32.9
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 6.8e-53 213.4 911 31.7
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 1.9e-50 205.3 883 31.3
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 4.2e-50 204.1 874 30.1
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 7.8e-49 199.9 930 27.5
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 1.5e-47 195.7 893 28.7
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 1.9e-47 195.3 915 31.8
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 5.6e-47 193.7 951 32.9
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 8.1e-46 189.9 987 30.9
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 3.4e-44 184.5 920 28.2
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 2.2e-43 181.8 921 28.0
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 4.9e-43 180.6 898 28.7
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 8.4e-43 179.9 914 31.5
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 1.3e-40 172.6 881 29.9
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 1.3e-40 172.6 913 30.1
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 1.3e-40 172.6 915 33.2
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 3.9e-40 171.0 921 30.2
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 5.1e-40 170.6 499 33.5
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 6.6e-40 170.2 463 35.0
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 3.3e-39 167.9 914 35.3
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 4.3e-39 167.5 904 30.0
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 1.3e-38 166.0 449 34.7
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 1.6e-38 165.6 480 37.9
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 2.1e-38 165.2 886 28.3
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 3.6e-38 164.5 902 27.4
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 3.6e-38 164.5 919 29.2
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 4.8e-38 164.1 893 28.8
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 8.1e-38 163.3 916 28.6
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 1.1e-37 162.9 514 33.3
Manes.07G052400 Manihot esculenta HOM05D004628 ORTHO05D005166 1.4e-37 162.5 519 33.7
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 4.0e-37 161.0 906 26.7
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 5.3e-37 160.6 945 29.8
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 9.0e-37 159.8 920 31.6
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 2.0e-36 158.7 437 33.9
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 1.7e-35 155.6 889 33.3
FAN15G3289 Fragaria x ananassa HOM05D004628 ORTHO05D005166 2.2e-35 155.2 910 29.6
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 2.2e-35 155.2 879 29.7
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 2.9e-35 154.8 902 34.0
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 3.8e-35 154.5 268 42.9
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 1.2e-33 149.4 967 26.9
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 6.0e-33 147.1 969 26.2
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 1.3e-32 146.0 966 28.0
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 3.0e-32 144.8 926 28.2
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 1.5e-31 142.5 877 30.1
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 1.9e-31 142.1 965 33.4
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 1.3e-30 139.4 425 31.5
CAN.G289.65 Capsicum annuum HOM05D004628 ORTHO05D005166 2.8e-30 138.3 241 42.3
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 2.8e-30 138.3 348 34.8
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 3.7e-30 137.9 270 41.1
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 4.8e-30 137.5 912 27.7
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea HOM05D004628 ORTHO05D005166 6.2e-30 137.1 953 28.2
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 3.1e-29 134.8 882 28.1
PSO210G3573 Papaver somniferum HOM05D004628 ORTHO05D005166 5.3e-29 134.0 921 28.7
Ca_21082_v3 Cicer arietinum L. HOM05D004628 ORTHO05D005166 6.9e-29 133.7 961 26.8
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 2.6e-28 131.7 849 27.8
PSO447G0365 Papaver somniferum HOM05D004628 ORTHO05D005166 5.8e-28 130.6 936 26.1
Lalb_Chr15g0087631 Lupinus albus HOM05D004628 ORTHO05D005166 2.2e-27 128.6 477 30.4
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea HOM05D004628 ORTHO05D005166 4.9e-27 127.5 925 27.8
Psat4g006640 Pisum sativum HOM05D004628 ORTHO05D005166 5.5e-26 124.0 979 26.5
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 7.1e-26 123.6 461 31.0
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 9.3e-26 123.2 887 27.3
GSVIVG01037037001 Vitis vinifera HOM05D004628 ORTHO05D005166 1.8e-24 119.0 171 49.7
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 2.3e-24 118.6 883 25.5
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 2.3e-24 118.6 818 31.1
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea HOM05D004628 ORTHO05D005166 5.1e-24 117.5 894 25.4
CAN.G289.56 Capsicum annuum HOM05D004628 ORTHO05D005166 8.7e-24 116.7 153 50.3
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 1.9e-23 115.5 843 26.3
CAN.G289.57 Capsicum annuum HOM05D004628 ORTHO05D005166 1.3e-22 112.8 158 49.4
AT2G16270 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 2.1e-22 112.1 903 25.1
Lsat_1_v5_gn_5_129280 Lactuca sativa HOM05D004628 ORTHO05D005166 4.8e-22 110.9 254 36.6
arahy.Tifrunner.gnm1.ann1.53VTV0 Arachis hypogaea HOM05D004628 ORTHO05D005166 1.1e-21 109.8 214 39.7
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 4.1e-21 107.8 865 25.4
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 3.4e-20 104.8 800 25.1
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 7.6e-20 103.6 481 29.5
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 6.5e-19 100.5 788 25.1
Carub.0001s1637 Capsella rubella HOM05D004628 ORTHO05D005166 6.5e-19 100.5 875 24.7
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 6.5e-19 100.5 889 26.8
Psat6g212600 Pisum sativum HOM05D004628 ORTHO05D005166 8.4e-19 100.1 331 34.1
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 1.9e-18 99.0 787 24.5
THA.LOC104819526 Tarenaya hassleriana HOM05D004628 ORTHO05D005166 2.5e-18 98.6 928 24.7
Thhalv10006806m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 5.5e-18 97.4 815 25.3
C05p14910 Brassica napus HOM05D004628 ORTHO05D005166 2.1e-17 95.5 851 25.3
CAN.G535.2 Capsicum annuum HOM05D004628 ORTHO05D005166 6.1e-17 94.0 130 46.2
CAN.G289.55 Capsicum annuum HOM05D004628 ORTHO05D005166 7.9e-17 93.6 340 32.4
CARHR017100 Cardamine hirsuta HOM05D004628 ORTHO05D005166 2.3e-16 92.0 831 30.7
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 3.0e-16 91.7 210 39.5
Sp3g29460 Schrenkiella parvula HOM05D004628 ORTHO05D005166 8.7e-16 90.1 925 24.0
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 1.1e-15 89.7 819 25.4
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 1.9e-15 89.0 854 26.3
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 2.8e-14 85.1 189 40.7
A06p12620 Brassica napus HOM05D004628 ORTHO05D005166 3.7e-14 84.7 887 24.6
ATR0767G029 Amborella trichopoda HOM05D004628 ORTHO05D005166 1.1e-13 83.2 253 32.8
AT1G16630 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 3.1e-13 81.6 873 22.5
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 1.2e-12 79.7 179 37.4
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 3.4e-12 78.2 224 35.3
Os03g0672400 Oryza sativa ssp. japonica HOM05D058439 ORTHO05D005166 5.9e-12 77.4 233 33.0
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 1.0e-11 76.6 239 34.3
AL1G28790 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 1.7e-11 75.9 864 24.2
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 1.7e-11 75.9 908 28.2
BraA06t24423Z Brassica rapa HOM05D004628 ORTHO05D005166 2.2e-11 75.5 873 23.5
BolC5t30206H Brassica oleracea HOM05D004628 ORTHO05D005166 2.9e-11 75.1 818 25.1
FvH4_6g23772 Fragaria vesca HOM05D004628 ORTHO05D005166 8.5e-11 73.6 157 40.8
Psat5g077040 Pisum sativum HOM05D004628 ORTHO05D005166 1.9e-10 72.4 136 40.4
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 2.5e-10 72.0 220 35.5
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 2.5e-10 72.0 233 33.9
Nitab4.5_0008331g0010 Nicotiana tabacum HOM05D004628 ORTHO05D005166 3.2e-10 71.6 211 35.1
FAN09G3722 Fragaria x ananassa HOM05D004628 ORTHO05D005166 4.2e-10 71.2 50 68.0
Nn5g30859 Nelumbo nucifera HOM05D004628 ORTHO05D005166 7.2e-10 70.5 105 49.5
Sp1g14770 Schrenkiella parvula HOM05D004628 ORTHO05D005166 7.2e-10 70.5 888 25.3
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 9.4e-10 70.1 326 30.1
SEGI_16491 Sequoiadendron giganteum HOM05D004628 ORTHO05D005166 9.4e-10 70.1 348 31.9
HPP92_001855 Vanilla planifolia HOM05D004628 ORTHO05D005166 9.4e-10 70.1 865 23.2
arahy.Tifrunner.gnm1.ann1.GD5ZZG Arachis hypogaea HOM05D004628 ORTHO05D005166 1.2e-09 69.7 244 32.8
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 2.1e-09 68.9 155 38.1
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 2.7e-09 68.6 222 35.6
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 2.7e-09 68.6 69 65.2
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 4.6e-09 67.8 201 33.3
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 6.1e-09 67.4 252 29.0
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 1.8e-08 65.9 206 33.5
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 1.8e-08 65.9 200 32.5
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 2.3e-08 65.5 173 38.7
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 2.3e-08 65.5 232 31.9
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 6.7e-08 63.9 183 34.4
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 8.8e-08 63.5 193 35.8
BcaC05g25526 Brassica carinata HOM05D004628 ORTHO05D005166 1.1e-07 63.2 901 24.4
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 1.5e-07 62.8 182 32.4
Psat0ss6263g0240 Pisum sativum HOM05D004165 ORTHO05D005166 2.0e-07 62.4 35 77.1
Solyc03g121080.3 Solanum lycopersicum HOM05D008208 ORTHO05D010143 2.5e-07 62.0 205 33.2
BcaNung07335 Brassica carinata HOM05D004628 ORTHO05D005166 5.7e-07 60.8 81 48.1
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 5.7e-07 60.8 254 27.6
MBI04_g07011_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 7.4e-07 60.5 255 27.5
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 7.4e-07 60.5 200 32.5
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 9.7e-07 60.1 203 34.0
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 1.3e-06 59.7 197 32.5
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 1.7e-06 59.3 197 33.0
Oeu002526.1 Olea europaea HOM05D008208 ORTHO05D010143 1.7e-06 59.3 202 33.2
CAN.G1627.6 Capsicum annuum HOM05D004628 ORTHO05D005166 2.2e-06 58.9 91 57.1
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 4.8e-06 57.8 171 36.3
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 4.8e-06 57.8 229 29.3
Nn1g01808 Nelumbo nucifera HOM05D004628 ORTHO05D005166 4.8e-06 57.8 90 45.6
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 6.3e-06 57.4 211 32.2
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 8.2e-06 57.0 158 36.1


User provided reference genes

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